CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00160p00054480
(
Amborella trichopoda
)
Dof
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02701 (zf-Dof)
IPR003851
AMTR_s00160p00054480
T170147_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DOF3.1
M01942_2.00
Arabidopsis thaliana
NCKTTNNN
NNNAAMGN
PBM
Weirauch et al.(2014)
pTH8190
0.520
0.520
PK14080.1
M01218_2.00
Cannabis sativa
NCDTTHNN
NNDAAHGN
PBM
Lambert et al.(2019)
pTH10123
0.520
0.520
For this family, TFs with SR scores >
0.508
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN10979
Dof
31
80
APLECPGGDSFDTNMSQPRHSCRTCCRSLTNGGTLRNVQLGGNSCKRNRP
Links
Other
Dof
family TFs
Other
Amborella trichopoda
TFs
209 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy