Bo7g048220 (Brassica oleracea)
Dof

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02701 (zf-Dof) IPR003851 Bo7g048220 T170268_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK05671.1
M01215_2.00
Cannabis sativa
NCDWWNNN

NNNWWHGN
PBM
Lambert et al.(2019)
pTH10101
0.814 0.814
DOF3.1
M01942_2.00
Arabidopsis thaliana
NCKTTNNN

NNNAAMGN
PBM
Weirauch et al.(2014)
pTH8190
0.797 0.797
PK14080.1
M01218_2.00
Cannabis sativa
NCDTTHNN

NNDAAHGN
PBM
Lambert et al.(2019)
pTH10123
0.797 0.797
PK15337.1
M01219_2.00
Cannabis sativa
NCTTTHN

NDAAAGN
PBM
Lambert et al.(2019)
pTH10186
0.797 0.797
DOF2.5
M01212_2.00
Arabidopsis thaliana
NNNCKTTWNN

NNWAAMGNNN
PBM
Lambert et al.(2019)
pTH11562
0.780 0.780
DOF4.7
M01945_2.00
Arabidopsis thaliana
NCKTTHNNN

NNNDAAMGN
PBM
Weirauch et al.(2014)
pTH7189
0.780 0.780
DOF5.7
M00862_2.00
Arabidopsis thaliana
NNNCKTTN

NAAMGNNN
PBM
Franco-Zorrilla et al.(2014)
Dof5.7
0.780 0.780
PK07031.1
M01216_2.00
Cannabis sativa
NCKTTHN

NDAAMGN
PBM
Lambert et al.(2019)
pTH11435
0.780 0.780
DOF4.7
M06861_2.00
Arabidopsis thaliana
HHHHYHHHNHHHHHHHWWTWWCTTTTTN

NAAAAAGWWAWWDDDDDDDNDDDRDDDD
Dap-seq
OMalley et al.(2016)
At4g38000_col_a
0.780 0.780
DOF4.7
M06862_2.00
Arabidopsis thaliana
NYWACTTTWTB

VAWAAAGTWRN
Dap-seq
OMalley et al.(2016)
At4g38000_colamp_a
0.780 0.780
DOF5.1
M06863_2.00
Arabidopsis thaliana
HYHYWYHHHYTTWNCTTTTTN

NAAAAAGNWAARDDDRWRDRD
Dap-seq
OMalley et al.(2016)
AT5G02460_col_a
0.780 0.780
DOF5.1
M06864_2.00
Arabidopsis thaliana
NHDYHRCTTTWTNNHNNHN

NDNNDNNAWAAAGYDRHDN
Dap-seq
OMalley et al.(2016)
AT5G02460_colamp_a
0.780 0.780
DOF2.5
M06843_2.00
Arabidopsis thaliana
DYHMCTTTTTN

NAAAAAGKDRH
Dap-seq
OMalley et al.(2016)
DAG2_col_a
0.780 0.780
DOF2.5
M06844_2.00
Arabidopsis thaliana
HWDYHMCTTTTTN

NAAAAAGKDRHWD
Dap-seq
OMalley et al.(2016)
DAG2_colamp_a
0.780 0.780
DOF3.4
M06851_2.00
Arabidopsis thaliana
NNNHYHYHHHWYYHNCTTTWB

VWAAAGNDRRWDDDRDRDNNN
Dap-seq
OMalley et al.(2016)
OBP1_col_a
0.780 0.780
PBF
M02675_2.00
Zea mays
RCTTT

AAAGY
SELEX
Mathelier et al.(2014)
MA0064.1
0.780 0.780
PBF
M10438_2.00
Zea mays
BBDCTTTWNWD

HWNWAAAGHVV
Transfac
Matys et al.(2006)
P$PBF_01
0.780 0.780
DOF5.3
M01947_2.00
Arabidopsis thaliana
CKTTNNN

NNNAAMG
PBM
Weirauch et al.(2014)
pTH7182
0.763 0.763
DOF5.4
M01948_2.00
Arabidopsis thaliana
NDCGTTAWCN

NGWTAACGHN
PBM
Weirauch et al.(2014)
pTH7160
0.763 0.763
DOF5.4
M01949_2.00
Arabidopsis thaliana
NWACGTTWHNN

NNDWAACGTWN
PBM
Weirauch et al.(2014)
pTH7535
0.763 0.763
e_gw1.170.52.1
M01952_2.00
Physcomitrella patens
NNNCTTTHNN

NNDAAAGNNN
PBM
Weirauch et al.(2014)
pTH8464
0.763 0.763
gw1.12.257.1
M01955_2.00
Physcomitrella patens
NNDDNNN

NNNHHNN
PBM
Weirauch et al.(2014)
pTH8651
0.763 0.763
PK03929.1
M01214_2.00
Cannabis sativa
NNNCTTTWNN

NNWAAAGNNN
PBM
Lambert et al.(2019)
pTH10165
0.763 0.763
PK20317.1
M01221_2.00
Cannabis sativa
CKTTWNN

NNWAAMG
PBM
Lambert et al.(2019)
pTH11298
0.763 0.763
PK23763.1
M01224_2.00
Cannabis sativa
NNNCTTTWN

NWAAAGNNN
PBM
Lambert et al.(2019)
pTH10194
0.763 0.763
DOF1.7
M06833_2.00
Arabidopsis thaliana
HNNHWTYWNCTTTTYNHNHHN

NDDNDNRAAAAGNWRAWDNND
Dap-seq
OMalley et al.(2016)
Adof1_col_a
0.763 0.763
DOF1.7
M06834_2.00
Arabidopsis thaliana
NNHNNYWRCTTTTTNNHHNNH

DNNDDNNAAAAAGYWRNNDNN
Dap-seq
OMalley et al.(2016)
Adof1_colamp_a
0.763 0.763
DOF2.2
M06839_2.00
Arabidopsis thaliana
HHHYHHHHYWTYHNCTTTTTN

NAAAAAGNDRAWRDDDDRDDD
Dap-seq
OMalley et al.(2016)
AT2G28810_col_a
0.763 0.763
DOF2.2
M06840_2.00
Arabidopsis thaliana
NYHNCTTTWTNNNHH

DDNNNAWAAAGNDRN
Dap-seq
OMalley et al.(2016)
AT2G28810_colamp_a
0.763 0.763
OBP3
M06854_2.00
Arabidopsis thaliana
BTHWCTTTTYNHYTTYWYYHH

DDRRWRAARDNRAAAAGWDAV
Dap-seq
OMalley et al.(2016)
OBP3_col_a
0.763 0.763
OBP3
M06855_2.00
Arabidopsis thaliana
NHNWHNHHNYWNCTTTTYN

NRAAAAGNWRNDDNDWNDN
Dap-seq
OMalley et al.(2016)
OBP3_colamp_a
0.763 0.763
DOF5.4
M06865_2.00
Arabidopsis thaliana
DNWNYHMCTTTTTN

NAAAAAGKDRNWNH
Dap-seq
OMalley et al.(2016)
OBP4_col_a
0.763 0.763
DOF5.4
M06866_2.00
Arabidopsis thaliana
HWDYHVCTTTTTNNNHHNH

DNDDNNNAAAAAGBDRHWD
Dap-seq
OMalley et al.(2016)
OBP4_colamp_a
0.763 0.763
Dof3
M02676_2.00
Zea mays
BRCTTT

AAAGYV
SELEX
Mathelier et al.(2014)
MA0021.1
0.763 0.763
Dof3
M10439_2.00
Zea mays
NBNCTTTNNBN

NVNNAAAGNVN
Transfac
Matys et al.(2006)
P$DOF3_01
0.763 0.763
DOF2.4
M01940_2.00
Arabidopsis thaliana
NCKTTWN

NWAAMGN
PBM
Weirauch et al.(2014)
pTH7912
0.746 0.746
DOF3.2
M01943_2.00
Arabidopsis thaliana
NHDNNNNN

NNNNNHDN
PBM
Weirauch et al.(2014)
pTH7183
0.746 0.746
DOF3.2
M06847_2.00
Arabidopsis thaliana
NYHVCTTTTTNNHHTHHNN

NNDDADDNNAAAAAGBDRN
Dap-seq
OMalley et al.(2016)
At3g45610_col_a
0.746 0.746
DOF3.2
M06848_2.00
Arabidopsis thaliana
NNHDDYHVCTTTTTB

VAAAAAGBDRHHDNN
Dap-seq
OMalley et al.(2016)
At3g45610_colamp_a
0.746 0.746
DOF2.4
M06841_2.00
Arabidopsis thaliana
HHWWTTHMCTTTTTN

NAAAAAGKDAAWWDD
Dap-seq
OMalley et al.(2016)
dof24_col_a
0.746 0.746
DOF2.4
M06842_2.00
Arabidopsis thaliana
HHMCTTTWTNNNNHN

NDNNNNAWAAAGKDD
Dap-seq
OMalley et al.(2016)
dof24_colamp_a
0.746 0.746
DOF1.8
M01939_2.00
Arabidopsis thaliana
NNNCKTTHNN

NNDAAMGNNN
PBM
Weirauch et al.(2014)
pTH7256
0.729 0.729
DOF1.8
M01062_2.00
Arabidopsis thaliana
NHVCTTTWH

DWAAAGBDN
PBM
Sullivan et al.(2014)
pTH7653
0.729 0.729
DOF5.6
M01063_2.00
Arabidopsis thaliana
NYDDWNNNN

NNNNWHHRN
PBM
Sullivan et al.(2014)
pTH7192
0.729 0.729
DOF5.6
M01950_2.00
Arabidopsis thaliana
NCKTTWNN

NNWAAMGN
PBM
Weirauch et al.(2014)
pTH7655
0.729 0.729
PK10955.1
M01217_2.00
Cannabis sativa
VCTTTWNN

NNWAAAGB
PBM
Lambert et al.(2019)
pTH10264
0.729 0.729
PK20555.1
M01222_2.00
Cannabis sativa
NNNCTTTWNN

NNWAAAGNNN
PBM
Lambert et al.(2019)
pTH10144
0.729 0.729
DOF1.8
M06835_2.00
Arabidopsis thaliana
WWWYHMCTTTTTNNNHNHW

WDNDNNNAAAAAGKDRWWW
Dap-seq
OMalley et al.(2016)
At1g64620_100ng20cy_b
0.729 0.729
DOF1.8
M06836_2.00
Arabidopsis thaliana
NHHMCTTTTTN

NAAAAAGKDDN
Dap-seq
OMalley et al.(2016)
At1g64620_colamp_a
0.729 0.729
DOF5.6
M06867_2.00
Arabidopsis thaliana
HHTYHNCTTTTTNHHHHHHHH

DDDDDDDDNAAAAAGNDRADD
Dap-seq
OMalley et al.(2016)
At5g62940_col_a
0.729 0.729
AT3G52440
M06852_2.00
Arabidopsis thaliana
DYHMCTTTWTN

NAWAAAGKDRH
Dap-seq
OMalley et al.(2016)
AT3G52440_col_a
0.712 0.712
AT3G52440
M06853_2.00
Arabidopsis thaliana
WWDDYHMCTTTTTNNHHYYWW

WWRRDDNNAAAAAGKDRHHWW
Dap-seq
OMalley et al.(2016)
AT3G52440_colamp_a
0.712 0.712
DOF5.8
M06868_2.00
Arabidopsis thaliana
HHNHHYHHHHYTTTHNCTTTTKNNHHNHW

WDNDDNNMAAAAGNDAAARDDDDRDDNDD
Dap-seq
OMalley et al.(2016)
AT5G66940_col_a
0.712 0.712
DOF5.8
M06869_2.00
Arabidopsis thaliana
NNHNDYWRCTTTTTNNHYHNH

DNDRDNNAAAAAGYWRHNDNN
Dap-seq
OMalley et al.(2016)
AT5G66940_colamp_a
0.712 0.712
Q6RK62_WHEAT
M10441_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PBF_Q2_01
0.712 0.712
CDF3
M01944_2.00
Arabidopsis thaliana
NHVCTTTWN

NWAAAGBDN
PBM
Weirauch et al.(2014)
pTH7659
0.695 0.695
gw1.385.26.1
M01956_2.00
Physcomitrella patens
NNNCKTTWNN

NNWAAMGNNN
PBM
Weirauch et al.(2014)
pTH8458
0.695 0.695
PK01144.1
M01213_2.00
Cannabis sativa
NCTTTWN

NWAAAGN
PBM
Lambert et al.(2019)
pTH10160
0.695 0.695
CDF3
M06849_2.00
Arabidopsis thaliana
HWTDYMCTTTTTNNHHHHW

WDDDDNNAAAAAGKRHAWD
Dap-seq
OMalley et al.(2016)
CDF3_col_a
0.695 0.695
CDF3
M06850_2.00
Arabidopsis thaliana
DDYRCTTTTHNNHYTTTN

NAAARDNNDAAAAGYRHH
Dap-seq
OMalley et al.(2016)
CDF3_colamp_a
0.695 0.695
CDF2
M01946_2.00
Arabidopsis thaliana
NHVCTTTWHN

NDWAAAGBDN
PBM
Weirauch et al.(2014)
pTH7574
0.678 0.678
e_gw1.149.93.1
M01951_2.00
Physcomitrella patens
NCDTTNNN

NNNAAHGN
PBM
Weirauch et al.(2014)
pTH8463
0.678 0.678
e_gw1.392.16.1
M01953_2.00
Physcomitrella patens
NNCTTTWNN

NNWAAAGNN
PBM
Weirauch et al.(2014)
pTH8686
0.678 0.678
estExt_fgenesh1_pg.C_370003
M01954_2.00
Physcomitrella patens
NNNNHDNNNN

NNNNHDNNNN
PBM
Weirauch et al.(2014)
pTH8469
0.678 0.678
MNB1A
M02677_2.00
Zea mays
DCTTT

AAAGH
SELEX
Mathelier et al.(2014)
MA0053.1
0.678 0.678
MNB1A
M10440_2.00
Zea mays
NNDCTTTWNNN

NNNWAAAGHNN
Transfac
Matys et al.(2006)
P$DOF1_01
0.678 0.678
DOF4.3
M06857_2.00
Arabidopsis thaliana
AAAGNYRCTTT

AAAGYRNCTTT
Dap-seq
OMalley et al.(2016)
dof43_col_a
0.661 0.661
DOF4.3
M06858_2.00
Arabidopsis thaliana
NWAAAGHRVCTTTW

WAAAGBYDCTTTWN
Dap-seq
OMalley et al.(2016)
dof43_colamp_a
0.661 0.661
Dof2
M02674_2.00
Zea mays
NGCTTT

AAAGCN
SELEX
Mathelier et al.(2014)
MA0020.1
0.644 0.644
Dof2
M10436_2.00
Zea mays
NNDCTTTWNND

HNNWAAAGHNN
Transfac
Matys et al.(2006)
P$DOF2_01
0.644 0.644
Dof2
M10437_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DOF_Q2
0.644 0.644
DOF1.5
M01938_2.00
Arabidopsis thaliana
ACKTTWWH

DWWAAMGT
PBM
Weirauch et al.(2014)
pTH7676
0.627 0.627
PK16340.1
M01220_2.00
Cannabis sativa
CKTTWNN

NNWAAMG
PBM
Lambert et al.(2019)
pTH10129
0.627 0.627
DOF1.6
M06831_2.00
Arabidopsis thaliana
HYACTTTWNNN

NNNWAAAGTRD
Dap-seq
OMalley et al.(2016)
AT1G47655_col_a
0.627 0.627
DOF1.6
M06832_2.00
Arabidopsis thaliana
YYYTTDNCTTTWYBN

NVRWAAAGNHAARRR
Dap-seq
OMalley et al.(2016)
AT1G47655_colamp_a
0.627 0.627
CDF5
M06837_2.00
Arabidopsis thaliana
HHWKYDCTTTTHHYTTTHYHYYWHNHH

DDNDWRRDRDAAARDDAAAAGHRMWDD
Dap-seq
OMalley et al.(2016)
AT1G69570_col_a
0.627 0.627
CDF5
M06838_2.00
Arabidopsis thaliana
YVCTTTTNNYTTWHHHBHBNN

NNVDVDDDWAARNNAAAAGBR
Dap-seq
OMalley et al.(2016)
AT1G69570_colamp_a
0.627 0.627
DOF1.5
M06829_2.00
Arabidopsis thaliana
HWTDYMCTTTTTNHHHBHHNN

NNDDVDDDNAAAAAGKRHAWD
Dap-seq
OMalley et al.(2016)
COG1_col_a
0.627 0.627
DOF1.5
M06830_2.00
Arabidopsis thaliana
NHWWTDYACTTTTTN

NAAAAAGTRHAWWDN
Dap-seq
OMalley et al.(2016)
COG1_colamp_a
0.627 0.627
DOF4.5
M06859_2.00
Arabidopsis thaliana
AAAKYHDCTTTWTN

NAWAAAGHDRMTTT
Dap-seq
OMalley et al.(2016)
dof45_col_a
0.627 0.627
DOF4.5
M06860_2.00
Arabidopsis thaliana
WAAAGYYDCTTTWDN

NHWAAAGHRRCTTTW
Dap-seq
OMalley et al.(2016)
dof45_colamp_a
0.627 0.627
PK23009.1
M01223_2.00
Cannabis sativa
NNHVCTTTWN

NWAAAGBDNN
PBM
Lambert et al.(2019)
pTH10279
0.610 0.610
DOF4.2
M06856_2.00
Arabidopsis thaliana
NNHWWWRCCTTTTTNNHNH

DNDNNAAAAAGGYWWWDNN
Dap-seq
OMalley et al.(2016)
dof42_col_a
0.508 0.508
For this family, TFs with SR scores > 0.508 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g048220.1 Dof 48 106

Links

Other Dof family TFs
Other Brassica oleracea TFs

1974 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003941 Calypte anna Aan_R003941 N 0.000
Afo_R009964 Aptenodytes forsteri Afo_R009964 N 0.000
Alligator_sinensis_CCG007839.1 Alligator sinensis Alligator_sinensis_CCG007839.1 N 0.000
Brh_R009980 Buceros rhinoceros Brh_R009980 N 0.000
Cmyd_10010856 Chelonia mydas Cmyd_10010856 N 0.000
ENSAMEG00000005726 Ailuropoda melanoleuca ENSAMEG00000005726 N 0.000
ENSAPLG00000015698 Anas platyrhynchos ENSAPLG00000015698 N 0.000
ENSFALG00000006051 Ficedula albicollis ENSFALG00000006051 N 0.000
ENSGALG00000016078 Gallus gallus ENSGALG00000016078 N 0.000
ENSMPUG00000005985 Mustela putorius furo ENSMPUG00000005985 N 0.000
ENSNLEG00000003937 Nomascus leucogenys ENSNLEG00000003937 N 0.000
ENSOARG00000015495 Ovis aries ENSOARG00000015495 N 0.000
ENSP00000384179-D1 Bos grunniens ENSP00000384179-D1 N 0.000
ENSPPYG00000018814 Pongo abelii ENSPPYG00000018814 N 0.000
ENSPSIG00000004514 Pelodiscus sinensis ENSPSIG00000004514 N 0.000
ENSSHAG00000016982 Sarcophilus harrisii ENSSHAG00000016982 N 0.000
ENSSTOG00000020729 Ictidomys tridecemlineatus ENSSTOG00000020729 N 0.000
ENSTSYG00000003772 Tarsius syrichta ENSTSYG00000003772 N 0.000
Gfo_R006037 Geospiza fortis Gfo_R006037 N 0.000
Myotis_brandtii_ZFPM2_10006936 Myotis brandtii Myotis_brandtii_ZFPM2_10006936 N 0.000
Tal_R002301 Tyto alba Tal_R002301 N 0.000
Zfpm2 Rattus norvegicus ENSRNOG00000004109 N 0.000
ZFPM2 Pteropus vampyrus ENSPVAG00000016508 N 0.000
ZFPM2 Sus scrofa ENSSSCG00000006038 N 0.000
ZFPM2 Pan troglodytes ENSPTRG00000020498 N 0.000
ZFPM2 Callithrix jacchus ENSCJAG00000006642 N 0.000
ZFPM2 Taeniopygia guttata ENSTGUG00000012190 N 0.000
ZFPM2 Tursiops truncatus ENSTTRG00000004168 N 0.000
ZFPM2 Otolemur garnettii ENSOGAG00000027431 N 0.000
ZFPM2 Felis catus ENSFCAG00000009078 N 0.000
ZFPM2 Echinops telfairi ENSETEG00000002635 N 0.000
ZFPM2 Equus caballus ENSECAG00000020172 N 0.000
Zfpm2 Dipodomys ordii ENSDORG00000002573 N 0.000
ZFPM2 Dasypus novemcinctus ENSDNOG00000045385 N 0.000
ZFPM2 Choloepus hoffmanni ENSCHOG00000010127 N 0.000
ZFPM2 Canis familiaris ENSCAFG00000000678 N 0.000
ZFPM2 Bos taurus ENSBTAG00000001649 N 0.000
ZFPM2 Homo sapiens ENSG00000169946 N 0.000
ZFPM2 Gorilla gorilla ENSGGOG00000011645 N 0.000
ZFPM2 Oryctolagus cuniculus ENSOCUG00000005930 N 0.000
ZFPM2 Ornithorhynchus anatinus ENSOANG00000011618 N 0.000
Zfpm2 Mus musculus ENSMUSG00000022306 N 0.000
ZFPM2 Monodelphis domestica ENSMODG00000005359 N 0.000
ZFPM2 Myotis lucifugus ENSMLUG00000010148 N 0.000
ZFPM2 Microcebus murinus ENSMICG00000001099 N 0.000
ZFPM2 Meleagris gallopavo ENSMGAG00000012374 N 0.000
ZFPM2 Loxodonta africana ENSLAFG00000010342 N 0.000
ZFPM2 Anolis carolinensis ENSACAG00000009858 N 0.000