CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G144188
(
Zea mays
)
Dof
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02701 (zf-Dof)
IPR003851
GRMZM2G144188
T170531_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Dof3
M02676_2.00
Zea mays
BRCTTT
AAAGYV
SELEX
Mathelier et al.(2014)
MA0021.1
0.929
0.929
Dof3
M10439_2.00
Zea mays
NBNCTTTNNBN
NVNNAAAGNVN
Transfac
Matys et al.(2006)
P$DOF3_01
0.929
0.929
DOF2.4
M01940_2.00
Arabidopsis thaliana
NCKTTWN
NWAAMGN
PBM
Weirauch et al.(2014)
pTH7912
0.893
0.893
DOF2.4
M06841_2.00
Arabidopsis thaliana
HHWWTTHMCTTTTTN
NAAAAAGKDAAWWDD
Dap-seq
OMalley et al.(2016)
dof24_col_a
0.893
0.893
DOF2.4
M06842_2.00
Arabidopsis thaliana
HHMCTTTWTNNNNHN
NDNNNNAWAAAGKDD
Dap-seq
OMalley et al.(2016)
dof24_colamp_a
0.893
0.893
PK23763.1
M01224_2.00
Cannabis sativa
NNNCTTTWN
NWAAAGNNN
PBM
Lambert et al.(2019)
pTH10194
0.857
0.857
DOF5.1
M06863_2.00
Arabidopsis thaliana
HYHYWYHHHYTTWNCTTTTTN
NAAAAAGNWAARDDDRWRDRD
Dap-seq
OMalley et al.(2016)
AT5G02460_col_a
0.857
0.857
DOF5.1
M06864_2.00
Arabidopsis thaliana
NHDYHRCTTTWTNNHNNHN
NDNNDNNAWAAAGYDRHDN
Dap-seq
OMalley et al.(2016)
AT5G02460_colamp_a
0.857
0.857
DOF3.2
M01943_2.00
Arabidopsis thaliana
NHDNNNNN
NNNNNHDN
PBM
Weirauch et al.(2014)
pTH7183
0.821
0.821
DOF4.7
M01945_2.00
Arabidopsis thaliana
NCKTTHNNN
NNNDAAMGN
PBM
Weirauch et al.(2014)
pTH7189
0.821
0.821
PK03929.1
M01214_2.00
Cannabis sativa
NNNCTTTWNN
NNWAAAGNNN
PBM
Lambert et al.(2019)
pTH10165
0.821
0.821
PK15337.1
M01219_2.00
Cannabis sativa
NCTTTHN
NDAAAGN
PBM
Lambert et al.(2019)
pTH10186
0.821
0.821
PK20317.1
M01221_2.00
Cannabis sativa
CKTTWNN
NNWAAMG
PBM
Lambert et al.(2019)
pTH11298
0.821
0.821
DOF3.2
M06847_2.00
Arabidopsis thaliana
NYHVCTTTTTNNHHTHHNN
NNDDADDNNAAAAAGBDRN
Dap-seq
OMalley et al.(2016)
At3g45610_col_a
0.821
0.821
DOF3.2
M06848_2.00
Arabidopsis thaliana
NNHDDYHVCTTTTTB
VAAAAAGBDRHHDNN
Dap-seq
OMalley et al.(2016)
At3g45610_colamp_a
0.821
0.821
DOF4.7
M06861_2.00
Arabidopsis thaliana
HHHHYHHHNHHHHHHHWWTWWCTTTTTN
NAAAAAGWWAWWDDDDDDDNDDDRDDDD
Dap-seq
OMalley et al.(2016)
At4g38000_col_a
0.821
0.821
DOF4.7
M06862_2.00
Arabidopsis thaliana
NYWACTTTWTB
VAWAAAGTWRN
Dap-seq
OMalley et al.(2016)
At4g38000_colamp_a
0.821
0.821
OBP3
M06854_2.00
Arabidopsis thaliana
BTHWCTTTTYNHYTTYWYYHH
DDRRWRAARDNRAAAAGWDAV
Dap-seq
OMalley et al.(2016)
OBP3_col_a
0.821
0.821
OBP3
M06855_2.00
Arabidopsis thaliana
NHNWHNHHNYWNCTTTTYN
NRAAAAGNWRNDDNDWNDN
Dap-seq
OMalley et al.(2016)
OBP3_colamp_a
0.821
0.821
DOF5.3
M01947_2.00
Arabidopsis thaliana
CKTTNNN
NNNAAMG
PBM
Weirauch et al.(2014)
pTH7182
0.786
0.786
DOF5.6
M01063_2.00
Arabidopsis thaliana
NYDDWNNNN
NNNNWHHRN
PBM
Sullivan et al.(2014)
pTH7192
0.786
0.786
DOF5.6
M01950_2.00
Arabidopsis thaliana
NCKTTWNN
NNWAAMGN
PBM
Weirauch et al.(2014)
pTH7655
0.786
0.786
DOF5.7
M00862_2.00
Arabidopsis thaliana
NNNCKTTN
NAAMGNNN
PBM
Franco-Zorrilla et al.(2014)
Dof5.7
0.786
0.786
DOF2.2
M06839_2.00
Arabidopsis thaliana
HHHYHHHHYWTYHNCTTTTTN
NAAAAAGNDRAWRDDDDRDDD
Dap-seq
OMalley et al.(2016)
AT2G28810_col_a
0.786
0.786
DOF2.2
M06840_2.00
Arabidopsis thaliana
NYHNCTTTWTNNNHH
DDNNNAWAAAGNDRN
Dap-seq
OMalley et al.(2016)
AT2G28810_colamp_a
0.786
0.786
DOF5.6
M06867_2.00
Arabidopsis thaliana
HHTYHNCTTTTTNHHHHHHHH
DDDDDDDDNAAAAAGNDRADD
Dap-seq
OMalley et al.(2016)
At5g62940_col_a
0.786
0.786
DOF2.5
M01212_2.00
Arabidopsis thaliana
NNNCKTTWNN
NNWAAMGNNN
PBM
Lambert et al.(2019)
pTH11562
0.750
0.750
DOF3.1
M01942_2.00
Arabidopsis thaliana
NCKTTNNN
NNNAAMGN
PBM
Weirauch et al.(2014)
pTH8190
0.750
0.750
DOF5.4
M01948_2.00
Arabidopsis thaliana
NDCGTTAWCN
NGWTAACGHN
PBM
Weirauch et al.(2014)
pTH7160
0.750
0.750
DOF5.4
M01949_2.00
Arabidopsis thaliana
NWACGTTWHNN
NNDWAACGTWN
PBM
Weirauch et al.(2014)
pTH7535
0.750
0.750
PK05671.1
M01215_2.00
Cannabis sativa
NCDWWNNN
NNNWWHGN
PBM
Lambert et al.(2019)
pTH10101
0.750
0.750
PK07031.1
M01216_2.00
Cannabis sativa
NCKTTHN
NDAAMGN
PBM
Lambert et al.(2019)
pTH11435
0.750
0.750
PK14080.1
M01218_2.00
Cannabis sativa
NCDTTHNN
NNDAAHGN
PBM
Lambert et al.(2019)
pTH10123
0.750
0.750
PK20555.1
M01222_2.00
Cannabis sativa
NNNCTTTWNN
NNWAAAGNNN
PBM
Lambert et al.(2019)
pTH10144
0.750
0.750
DOF1.7
M06833_2.00
Arabidopsis thaliana
HNNHWTYWNCTTTTYNHNHHN
NDDNDNRAAAAGNWRAWDNND
Dap-seq
OMalley et al.(2016)
Adof1_col_a
0.750
0.750
DOF1.7
M06834_2.00
Arabidopsis thaliana
NNHNNYWRCTTTTTNNHHNNH
DNNDDNNAAAAAGYWRNNDNN
Dap-seq
OMalley et al.(2016)
Adof1_colamp_a
0.750
0.750
DOF5.8
M06868_2.00
Arabidopsis thaliana
HHNHHYHHHHYTTTHNCTTTTKNNHHNHW
WDNDDNNMAAAAGNDAAARDDDDRDDNDD
Dap-seq
OMalley et al.(2016)
AT5G66940_col_a
0.750
0.750
DOF5.8
M06869_2.00
Arabidopsis thaliana
NNHNDYWRCTTTTTNNHYHNH
DNDRDNNAAAAAGYWRHNDNN
Dap-seq
OMalley et al.(2016)
AT5G66940_colamp_a
0.750
0.750
DOF2.5
M06843_2.00
Arabidopsis thaliana
DYHMCTTTTTN
NAAAAAGKDRH
Dap-seq
OMalley et al.(2016)
DAG2_col_a
0.750
0.750
DOF2.5
M06844_2.00
Arabidopsis thaliana
HWDYHMCTTTTTN
NAAAAAGKDRHWD
Dap-seq
OMalley et al.(2016)
DAG2_colamp_a
0.750
0.750
DOF5.4
M06865_2.00
Arabidopsis thaliana
DNWNYHMCTTTTTN
NAAAAAGKDRNWNH
Dap-seq
OMalley et al.(2016)
OBP4_col_a
0.750
0.750
DOF5.4
M06866_2.00
Arabidopsis thaliana
HWDYHVCTTTTTNNNHHNH
DNDDNNNAAAAAGBDRHWD
Dap-seq
OMalley et al.(2016)
OBP4_colamp_a
0.750
0.750
PBF
M02675_2.00
Zea mays
RCTTT
AAAGY
SELEX
Mathelier et al.(2014)
MA0064.1
0.750
0.750
PBF
M10438_2.00
Zea mays
BBDCTTTWNWD
HWNWAAAGHVV
Transfac
Matys et al.(2006)
P$PBF_01
0.750
0.750
DOF1.8
M01939_2.00
Arabidopsis thaliana
NNNCKTTHNN
NNDAAMGNNN
PBM
Weirauch et al.(2014)
pTH7256
0.714
0.714
DOF1.8
M01062_2.00
Arabidopsis thaliana
NHVCTTTWH
DWAAAGBDN
PBM
Sullivan et al.(2014)
pTH7653
0.714
0.714
DOF1.8
M06835_2.00
Arabidopsis thaliana
WWWYHMCTTTTTNNNHNHW
WDNDNNNAAAAAGKDRWWW
Dap-seq
OMalley et al.(2016)
At1g64620_100ng20cy_b
0.714
0.714
DOF1.8
M06836_2.00
Arabidopsis thaliana
NHHMCTTTTTN
NAAAAAGKDDN
Dap-seq
OMalley et al.(2016)
At1g64620_colamp_a
0.714
0.714
AT3G52440
M06852_2.00
Arabidopsis thaliana
DYHMCTTTWTN
NAWAAAGKDRH
Dap-seq
OMalley et al.(2016)
AT3G52440_col_a
0.714
0.714
AT3G52440
M06853_2.00
Arabidopsis thaliana
WWDDYHMCTTTTTNNHHYYWW
WWRRDDNNAAAAAGKDRHHWW
Dap-seq
OMalley et al.(2016)
AT3G52440_colamp_a
0.714
0.714
Q6RK62_WHEAT
M10441_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PBF_Q2_01
0.714
0.714
e_gw1.170.52.1
M01952_2.00
Physcomitrella patens
NNNCTTTHNN
NNDAAAGNNN
PBM
Weirauch et al.(2014)
pTH8464
0.679
0.679
gw1.12.257.1
M01955_2.00
Physcomitrella patens
NNDDNNN
NNNHHNN
PBM
Weirauch et al.(2014)
pTH8651
0.679
0.679
PK01144.1
M01213_2.00
Cannabis sativa
NCTTTWN
NWAAAGN
PBM
Lambert et al.(2019)
pTH10160
0.679
0.679
PK10955.1
M01217_2.00
Cannabis sativa
VCTTTWNN
NNWAAAGB
PBM
Lambert et al.(2019)
pTH10264
0.679
0.679
DOF1.6
M06831_2.00
Arabidopsis thaliana
HYACTTTWNNN
NNNWAAAGTRD
Dap-seq
OMalley et al.(2016)
AT1G47655_col_a
0.679
0.679
DOF1.6
M06832_2.00
Arabidopsis thaliana
YYYTTDNCTTTWYBN
NVRWAAAGNHAARRR
Dap-seq
OMalley et al.(2016)
AT1G47655_colamp_a
0.679
0.679
DOF3.4
M06851_2.00
Arabidopsis thaliana
NNNHYHYHHHWYYHNCTTTWB
VWAAAGNDRRWDDDRDRDNNN
Dap-seq
OMalley et al.(2016)
OBP1_col_a
0.679
0.679
PK16340.1
M01220_2.00
Cannabis sativa
CKTTWNN
NNWAAMG
PBM
Lambert et al.(2019)
pTH10129
0.643
0.643
CDF5
M06837_2.00
Arabidopsis thaliana
HHWKYDCTTTTHHYTTTHYHYYWHNHH
DDNDWRRDRDAAARDDAAAAGHRMWDD
Dap-seq
OMalley et al.(2016)
AT1G69570_col_a
0.643
0.643
CDF5
M06838_2.00
Arabidopsis thaliana
YVCTTTTNNYTTWHHHBHBNN
NNVDVDDDWAARNNAAAAGBR
Dap-seq
OMalley et al.(2016)
AT1G69570_colamp_a
0.643
0.643
DOF4.3
M06857_2.00
Arabidopsis thaliana
AAAGNYRCTTT
AAAGYRNCTTT
Dap-seq
OMalley et al.(2016)
dof43_col_a
0.643
0.643
DOF4.3
M06858_2.00
Arabidopsis thaliana
NWAAAGHRVCTTTW
WAAAGBYDCTTTWN
Dap-seq
OMalley et al.(2016)
dof43_colamp_a
0.643
0.643
Dof2
M02674_2.00
Zea mays
NGCTTT
AAAGCN
SELEX
Mathelier et al.(2014)
MA0020.1
0.643
0.643
MNB1A
M02677_2.00
Zea mays
DCTTT
AAAGH
SELEX
Mathelier et al.(2014)
MA0053.1
0.643
0.643
MNB1A
M10440_2.00
Zea mays
NNDCTTTWNNN
NNNWAAAGHNN
Transfac
Matys et al.(2006)
P$DOF1_01
0.643
0.643
Dof2
M10436_2.00
Zea mays
NNDCTTTWNND
HNNWAAAGHNN
Transfac
Matys et al.(2006)
P$DOF2_01
0.643
0.643
Dof2
M10437_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DOF_Q2
0.643
0.643
DOF1.5
M01938_2.00
Arabidopsis thaliana
ACKTTWWH
DWWAAMGT
PBM
Weirauch et al.(2014)
pTH7676
0.607
0.607
CDF3
M01944_2.00
Arabidopsis thaliana
NHVCTTTWN
NWAAAGBDN
PBM
Weirauch et al.(2014)
pTH7659
0.607
0.607
CDF2
M01946_2.00
Arabidopsis thaliana
NHVCTTTWHN
NDWAAAGBDN
PBM
Weirauch et al.(2014)
pTH7574
0.607
0.607
PK23009.1
M01223_2.00
Cannabis sativa
NNHVCTTTWN
NWAAAGBDNN
PBM
Lambert et al.(2019)
pTH10279
0.607
0.607
CDF3
M06849_2.00
Arabidopsis thaliana
HWTDYMCTTTTTNNHHHHW
WDDDDNNAAAAAGKRHAWD
Dap-seq
OMalley et al.(2016)
CDF3_col_a
0.607
0.607
CDF3
M06850_2.00
Arabidopsis thaliana
DDYRCTTTTHNNHYTTTN
NAAARDNNDAAAAGYRHH
Dap-seq
OMalley et al.(2016)
CDF3_colamp_a
0.607
0.607
DOF1.5
M06829_2.00
Arabidopsis thaliana
HWTDYMCTTTTTNHHHBHHNN
NNDDVDDDNAAAAAGKRHAWD
Dap-seq
OMalley et al.(2016)
COG1_col_a
0.607
0.607
DOF1.5
M06830_2.00
Arabidopsis thaliana
NHWWTDYACTTTTTN
NAAAAAGTRHAWWDN
Dap-seq
OMalley et al.(2016)
COG1_colamp_a
0.607
0.607
DOF4.5
M06859_2.00
Arabidopsis thaliana
AAAKYHDCTTTWTN
NAWAAAGHDRMTTT
Dap-seq
OMalley et al.(2016)
dof45_col_a
0.607
0.607
DOF4.5
M06860_2.00
Arabidopsis thaliana
WAAAGYYDCTTTWDN
NHWAAAGHRRCTTTW
Dap-seq
OMalley et al.(2016)
dof45_colamp_a
0.607
0.607
e_gw1.149.93.1
M01951_2.00
Physcomitrella patens
NCDTTNNN
NNNAAHGN
PBM
Weirauch et al.(2014)
pTH8463
0.571
0.571
e_gw1.392.16.1
M01953_2.00
Physcomitrella patens
NNCTTTWNN
NNWAAAGNN
PBM
Weirauch et al.(2014)
pTH8686
0.571
0.571
estExt_fgenesh1_pg.C_370003
M01954_2.00
Physcomitrella patens
NNNNHDNNNN
NNNNHDNNNN
PBM
Weirauch et al.(2014)
pTH8469
0.571
0.571
gw1.385.26.1
M01956_2.00
Physcomitrella patens
NNNCKTTWNN
NNWAAMGNNN
PBM
Weirauch et al.(2014)
pTH8458
0.571
0.571
DOF4.2
M06856_2.00
Arabidopsis thaliana
NNHWWWRCCTTTTTNNHNH
DNDNNAAAAAGGYWWWDNN
Dap-seq
OMalley et al.(2016)
dof42_col_a
0.571
0.571
For this family, TFs with SR scores >
0.508
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G144188_P01
Dof
104
133
EPGLKCPRCESTNTKFCYFNNYSLSQPPSR
Links
Other
Dof
family TFs
Other
Zea mays
TFs
81 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_019120
Acremonium chrysogenum
ACRE_019120
N
0.000
EURHEDRAFT_459142
Aspergillus ruber
EURHEDRAFT_459142
N
0.000
BBA_01980
Beauveria bassiana
BBA_01980
N
0.000
COCC4DRAFT_55380
Bipolaris maydis
COCC4DRAFT_55380
N
0.000
COCMIDRAFT_99482
Bipolaris oryzae
COCMIDRAFT_99482
N
0.000
COCSADRAFT_211993
Bipolaris sorokiniana
COCSADRAFT_211993
N
0.000
COCVIDRAFT_21525
Bipolaris victoriae
COCVIDRAFT_21525
N
0.000
COCCADRAFT_99015
Bipolaris zeicola
COCCADRAFT_99015
N
0.000
Bcin11g03660
Botrytis cinerea
Bcin11g03660
N
0.000
CHGG_04978
Chaetomium globosum
CHGG_04978
N
0.000
CTHT_0031020
Chaetomium thermophilum
CTHT_0031020
N
0.000
CGGC5_12074
Colletotrichum gloeosporioides
CGGC5_12074
N
0.000
GLRG_11035
Colletotrichum graminicola
GLRG_11035
N
0.000
CH063_11960
Colletotrichum higginsianum
CH063_11960
N
0.000
Cob_07467
Colletotrichum orbiculare
Cob_07467
N
0.000
CSUB01_03139
Colletotrichum sublineola
CSUB01_03139
N
0.000
CCM_07119
Cordyceps militaris
CCM_07119
N
0.000
estExt_fgenesh1_pg.C_30093
Cryphonectria parasitica
estExt_fgenesh1_pg.C_30093
N
0.000
FFUJ_01094
Fusarium fujikuroi
FFUJ_01094
N
0.000
FGRRES_00573
Fusarium graminearum
FGRRES_00573
N
0.000
FOXG_00478
Fusarium oxysporum
FOXG_00478
N
0.000
FPSE_03136
Fusarium pseudograminearum
FPSE_03136
N
0.000
NechaG57399
Fusarium solani
NechaG57399
N
0.000
FVEG_01035
Fusarium verticillioides
FVEG_01035
N
0.000
GGTG_05712
Gaeumannomyces graminis
GGTG_05712
N
0.000
CMQ_7508
Grosmannia clavigera
CMQ_7508
N
0.000
HCBG_03684
Histoplasma capsulatum
HCBG_03684
N
0.000
LEMA_P037490.1
Leptosphaeria maculans
LEMA_P037490.1
N
0.000
MPH_06015
Macrophomina phaseolina
MPH_06015
N
0.000
MGG_10529
Magnaporthe oryzae
MGG_10529
N
0.000
MAPG_04436
Magnaporthe poae
MAPG_04436
N
0.000
MBM_09638
Marssonina brunnea
MBM_09638
N
0.000
MANI_001316
Metarhizium anisopliae
MANI_001316
N
0.000
MBR_03401
Metarhizium brunneum
MBR_03401
N
0.000
MAJ_00706
Metarhizium majus
MAJ_00706
N
0.000
X797_003964
Metarhizium robertsii
X797_003964
N
0.000
MYCTH_2299531
Myceliophthora thermophila
MYCTH_2299531
N
0.000
estExt_Genewise1.C_sca_1_chr1_3_00545
Nectria haematococca
estExt_Genewise1.C_sca_1_chr1_3_00545
N
0.000
UCRNP2_5033
Neofusicoccum parvum
UCRNP2_5033
N
0.000
OIDMADRAFT_53432
Oidiodendron maius
OIDMADRAFT_53432
N
0.000
F503_05666
Ophiostoma piceae uamh
F503_05666
N
0.000
PDE_08589
Penicillium oxalicum
PDE_08589
N
0.000
PFICI_01055
Pestalotiopsis fici
PFICI_01055
N
0.000
PTT_13566
Pyrenophora teres
PTT_13566
N
0.000
PTRG_03145
Pyrenophora triticirepentis
PTRG_03145
N
0.000
SAPIO_CDS0868
Scedosporium apiospermum
SAPIO_CDS0868
N
0.000
SBOR_7395
Sclerotinia borealis
SBOR_7395
N
0.000
SETTUDRAFT_162963
Setosphaeria turcica
SETTUDRAFT_162963
N
0.000
SPBR_02323
Sporothrix brasiliensis
SPBR_02323
N
0.000
S40288_03918
Stachybotrys chartarum
S40288_03918
N
0.000
VHEMI06242
Torrubiella hemipterigena
VHEMI06242
N
0.000
TRIATDRAFT_46834
Trichoderma atroviride
TRIATDRAFT_46834
N
0.000
TRIREDRAFT_73559
Trichoderma reesei
TRIREDRAFT_73559
N
0.000
TRIVIDRAFT_230020
Trichoderma virens
TRIVIDRAFT_230020
N
0.000
GSTUM_00002175001
Tuber melanosporum
GSTUM_00002175001
N
0.000
VDBG_06331
Verticillium albo atrum
VDBG_06331
N
0.000
VDBG_06331
Verticillium alfalfae
VDBG_06331
N
0.000
VDAG_03481
Verticillium dahliae
VDAG_03481
N
0.000