MLOC_19593 (Hordeum vulgare)
Dof

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02701 (zf-Dof) IPR003851 MLOC_19593 T170655_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CDF3
M01944_2.00
Arabidopsis thaliana
NHVCTTTWN

NWAAAGBDN
PBM
Weirauch et al.(2014)
pTH7659
0.847 0.847
CDF2
M01946_2.00
Arabidopsis thaliana
NHVCTTTWHN

NDWAAAGBDN
PBM
Weirauch et al.(2014)
pTH7574
0.847 0.847
CDF3
M06849_2.00
Arabidopsis thaliana
HWTDYMCTTTTTNNHHHHW

WDDDDNNAAAAAGKRHAWD
Dap-seq
OMalley et al.(2016)
CDF3_col_a
0.847 0.847
CDF3
M06850_2.00
Arabidopsis thaliana
DDYRCTTTTHNNHYTTTN

NAAARDNNDAAAAGYRHH
Dap-seq
OMalley et al.(2016)
CDF3_colamp_a
0.847 0.847
DOF1.5
M01938_2.00
Arabidopsis thaliana
ACKTTWWH

DWWAAMGT
PBM
Weirauch et al.(2014)
pTH7676
0.797 0.797
DOF1.5
M06829_2.00
Arabidopsis thaliana
HWTDYMCTTTTTNHHHBHHNN

NNDDVDDDNAAAAAGKRHAWD
Dap-seq
OMalley et al.(2016)
COG1_col_a
0.797 0.797
DOF1.5
M06830_2.00
Arabidopsis thaliana
NHWWTDYACTTTTTN

NAAAAAGTRHAWWDN
Dap-seq
OMalley et al.(2016)
COG1_colamp_a
0.797 0.797
PK23009.1
M01223_2.00
Cannabis sativa
NNHVCTTTWN

NWAAAGBDNN
PBM
Lambert et al.(2019)
pTH10279
0.780 0.780
e_gw1.392.16.1
M01953_2.00
Physcomitrella patens
NNCTTTWNN

NNWAAAGNN
PBM
Weirauch et al.(2014)
pTH8686
0.763 0.763
estExt_fgenesh1_pg.C_370003
M01954_2.00
Physcomitrella patens
NNNNHDNNNN

NNNNHDNNNN
PBM
Weirauch et al.(2014)
pTH8469
0.763 0.763
gw1.385.26.1
M01956_2.00
Physcomitrella patens
NNNCKTTWNN

NNWAAMGNNN
PBM
Weirauch et al.(2014)
pTH8458
0.763 0.763
PK16340.1
M01220_2.00
Cannabis sativa
CKTTWNN

NNWAAMG
PBM
Lambert et al.(2019)
pTH10129
0.763 0.763
CDF5
M06837_2.00
Arabidopsis thaliana
HHWKYDCTTTTHHYTTTHYHYYWHNHH

DDNDWRRDRDAAARDDAAAAGHRMWDD
Dap-seq
OMalley et al.(2016)
AT1G69570_col_a
0.763 0.763
CDF5
M06838_2.00
Arabidopsis thaliana
YVCTTTTNNYTTWHHHBHBNN

NNVDVDDDWAARNNAAAAGBR
Dap-seq
OMalley et al.(2016)
AT1G69570_colamp_a
0.763 0.763
e_gw1.149.93.1
M01951_2.00
Physcomitrella patens
NCDTTNNN

NNNAAHGN
PBM
Weirauch et al.(2014)
pTH8463
0.729 0.729
DOF1.8
M01939_2.00
Arabidopsis thaliana
NNNCKTTHNN

NNDAAMGNNN
PBM
Weirauch et al.(2014)
pTH7256
0.695 0.695
DOF1.8
M01062_2.00
Arabidopsis thaliana
NHVCTTTWH

DWAAAGBDN
PBM
Sullivan et al.(2014)
pTH7653
0.695 0.695
DOF1.8
M06835_2.00
Arabidopsis thaliana
WWWYHMCTTTTTNNNHNHW

WDNDNNNAAAAAGKDRWWW
Dap-seq
OMalley et al.(2016)
At1g64620_100ng20cy_b
0.695 0.695
DOF1.8
M06836_2.00
Arabidopsis thaliana
NHHMCTTTTTN

NAAAAAGKDDN
Dap-seq
OMalley et al.(2016)
At1g64620_colamp_a
0.695 0.695
Dof2
M02674_2.00
Zea mays
NGCTTT

AAAGCN
SELEX
Mathelier et al.(2014)
MA0020.1
0.695 0.695
MNB1A
M02677_2.00
Zea mays
DCTTT

AAAGH
SELEX
Mathelier et al.(2014)
MA0053.1
0.695 0.695
MNB1A
M10440_2.00
Zea mays
NNDCTTTWNNN

NNNWAAAGHNN
Transfac
Matys et al.(2006)
P$DOF1_01
0.695 0.695
Dof2
M10436_2.00
Zea mays
NNDCTTTWNND

HNNWAAAGHNN
Transfac
Matys et al.(2006)
P$DOF2_01
0.695 0.695
Dof2
M10437_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DOF_Q2
0.695 0.695
DOF5.4
M01948_2.00
Arabidopsis thaliana
NDCGTTAWCN

NGWTAACGHN
PBM
Weirauch et al.(2014)
pTH7160
0.678 0.678
DOF5.4
M01949_2.00
Arabidopsis thaliana
NWACGTTWHNN

NNDWAACGTWN
PBM
Weirauch et al.(2014)
pTH7535
0.678 0.678
DOF5.4
M06865_2.00
Arabidopsis thaliana
DNWNYHMCTTTTTN

NAAAAAGKDRNWNH
Dap-seq
OMalley et al.(2016)
OBP4_col_a
0.678 0.678
DOF5.4
M06866_2.00
Arabidopsis thaliana
HWDYHVCTTTTTNNNHHNH

DNDDNNNAAAAAGBDRHWD
Dap-seq
OMalley et al.(2016)
OBP4_colamp_a
0.678 0.678
DOF2.5
M01212_2.00
Arabidopsis thaliana
NNNCKTTWNN

NNWAAMGNNN
PBM
Lambert et al.(2019)
pTH11562
0.661 0.661
PK14080.1
M01218_2.00
Cannabis sativa
NCDTTHNN

NNDAAHGN
PBM
Lambert et al.(2019)
pTH10123
0.661 0.661
DOF2.5
M06843_2.00
Arabidopsis thaliana
DYHMCTTTTTN

NAAAAAGKDRH
Dap-seq
OMalley et al.(2016)
DAG2_col_a
0.661 0.661
DOF2.5
M06844_2.00
Arabidopsis thaliana
HWDYHMCTTTTTN

NAAAAAGKDRHWD
Dap-seq
OMalley et al.(2016)
DAG2_colamp_a
0.661 0.661
DOF5.7
M00862_2.00
Arabidopsis thaliana
NNNCKTTN

NAAMGNNN
PBM
Franco-Zorrilla et al.(2014)
Dof5.7
0.644 0.644
e_gw1.170.52.1
M01952_2.00
Physcomitrella patens
NNNCTTTHNN

NNDAAAGNNN
PBM
Weirauch et al.(2014)
pTH8464
0.644 0.644
gw1.12.257.1
M01955_2.00
Physcomitrella patens
NNDDNNN

NNNHHNN
PBM
Weirauch et al.(2014)
pTH8651
0.644 0.644
PK01144.1
M01213_2.00
Cannabis sativa
NCTTTWN

NWAAAGN
PBM
Lambert et al.(2019)
pTH10160
0.644 0.644
PK20555.1
M01222_2.00
Cannabis sativa
NNNCTTTWNN

NNWAAAGNNN
PBM
Lambert et al.(2019)
pTH10144
0.644 0.644
DOF1.7
M06833_2.00
Arabidopsis thaliana
HNNHWTYWNCTTTTYNHNHHN

NDDNDNRAAAAGNWRAWDNND
Dap-seq
OMalley et al.(2016)
Adof1_col_a
0.644 0.644
DOF1.7
M06834_2.00
Arabidopsis thaliana
NNHNNYWRCTTTTTNNHHNNH

DNNDDNNAAAAAGYWRNNDNN
Dap-seq
OMalley et al.(2016)
Adof1_colamp_a
0.644 0.644
DOF3.4
M06851_2.00
Arabidopsis thaliana
NNNHYHYHHHWYYHNCTTTWB

VWAAAGNDRRWDDDRDRDNNN
Dap-seq
OMalley et al.(2016)
OBP1_col_a
0.644 0.644
DOF3.1
M01942_2.00
Arabidopsis thaliana
NCKTTNNN

NNNAAMGN
PBM
Weirauch et al.(2014)
pTH8190
0.627 0.627
DOF5.3
M01947_2.00
Arabidopsis thaliana
CKTTNNN

NNNAAMG
PBM
Weirauch et al.(2014)
pTH7182
0.627 0.627
PK05671.1
M01215_2.00
Cannabis sativa
NCDWWNNN

NNNWWHGN
PBM
Lambert et al.(2019)
pTH10101
0.627 0.627
PK07031.1
M01216_2.00
Cannabis sativa
NCKTTHN

NDAAMGN
PBM
Lambert et al.(2019)
pTH11435
0.627 0.627
PK10955.1
M01217_2.00
Cannabis sativa
VCTTTWNN

NNWAAAGB
PBM
Lambert et al.(2019)
pTH10264
0.627 0.627
PK20317.1
M01221_2.00
Cannabis sativa
CKTTWNN

NNWAAMG
PBM
Lambert et al.(2019)
pTH11298
0.627 0.627
DOF1.6
M06831_2.00
Arabidopsis thaliana
HYACTTTWNNN

NNNWAAAGTRD
Dap-seq
OMalley et al.(2016)
AT1G47655_col_a
0.627 0.627
DOF1.6
M06832_2.00
Arabidopsis thaliana
YYYTTDNCTTTWYBN

NVRWAAAGNHAARRR
Dap-seq
OMalley et al.(2016)
AT1G47655_colamp_a
0.627 0.627
AT3G52440
M06852_2.00
Arabidopsis thaliana
DYHMCTTTWTN

NAWAAAGKDRH
Dap-seq
OMalley et al.(2016)
AT3G52440_col_a
0.627 0.627
AT3G52440
M06853_2.00
Arabidopsis thaliana
WWDDYHMCTTTTTNNHHYYWW

WWRRDDNNAAAAAGKDRHHWW
Dap-seq
OMalley et al.(2016)
AT3G52440_colamp_a
0.627 0.627
OBP3
M06854_2.00
Arabidopsis thaliana
BTHWCTTTTYNHYTTYWYYHH

DDRRWRAARDNRAAAAGWDAV
Dap-seq
OMalley et al.(2016)
OBP3_col_a
0.627 0.627
OBP3
M06855_2.00
Arabidopsis thaliana
NHNWHNHHNYWNCTTTTYN

NRAAAAGNWRNDDNDWNDN
Dap-seq
OMalley et al.(2016)
OBP3_colamp_a
0.627 0.627
DOF5.6
M01063_2.00
Arabidopsis thaliana
NYDDWNNNN

NNNNWHHRN
PBM
Sullivan et al.(2014)
pTH7192
0.610 0.610
DOF5.6
M01950_2.00
Arabidopsis thaliana
NCKTTWNN

NNWAAMGN
PBM
Weirauch et al.(2014)
pTH7655
0.610 0.610
PK15337.1
M01219_2.00
Cannabis sativa
NCTTTHN

NDAAAGN
PBM
Lambert et al.(2019)
pTH10186
0.610 0.610
DOF2.2
M06839_2.00
Arabidopsis thaliana
HHHYHHHHYWTYHNCTTTTTN

NAAAAAGNDRAWRDDDDRDDD
Dap-seq
OMalley et al.(2016)
AT2G28810_col_a
0.610 0.610
DOF2.2
M06840_2.00
Arabidopsis thaliana
NYHNCTTTWTNNNHH

DDNNNAWAAAGNDRN
Dap-seq
OMalley et al.(2016)
AT2G28810_colamp_a
0.610 0.610
DOF5.6
M06867_2.00
Arabidopsis thaliana
HHTYHNCTTTTTNHHHHHHHH

DDDDDDDDNAAAAAGNDRADD
Dap-seq
OMalley et al.(2016)
At5g62940_col_a
0.610 0.610
DOF5.8
M06868_2.00
Arabidopsis thaliana
HHNHHYHHHHYTTTHNCTTTTKNNHHNHW

WDNDDNNMAAAAGNDAAARDDDDRDDNDD
Dap-seq
OMalley et al.(2016)
AT5G66940_col_a
0.610 0.610
DOF5.8
M06869_2.00
Arabidopsis thaliana
NNHNDYWRCTTTTTNNHYHNH

DNDRDNNAAAAAGYWRHNDNN
Dap-seq
OMalley et al.(2016)
AT5G66940_colamp_a
0.610 0.610
Q6RK62_WHEAT
M10441_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PBF_Q2_01
0.610 0.610
DOF3.2
M01943_2.00
Arabidopsis thaliana
NHDNNNNN

NNNNNHDN
PBM
Weirauch et al.(2014)
pTH7183
0.593 0.593
PK03929.1
M01214_2.00
Cannabis sativa
NNNCTTTWNN

NNWAAAGNNN
PBM
Lambert et al.(2019)
pTH10165
0.593 0.593
DOF3.2
M06847_2.00
Arabidopsis thaliana
NYHVCTTTTTNNHHTHHNN

NNDDADDNNAAAAAGBDRN
Dap-seq
OMalley et al.(2016)
At3g45610_col_a
0.593 0.593
DOF3.2
M06848_2.00
Arabidopsis thaliana
NNHDDYHVCTTTTTB

VAAAAAGBDRHHDNN
Dap-seq
OMalley et al.(2016)
At3g45610_colamp_a
0.593 0.593
PBF
M02675_2.00
Zea mays
RCTTT

AAAGY
SELEX
Mathelier et al.(2014)
MA0064.1
0.593 0.593
Dof3
M02676_2.00
Zea mays
BRCTTT

AAAGYV
SELEX
Mathelier et al.(2014)
MA0021.1
0.593 0.593
Dof3
M10439_2.00
Zea mays
NBNCTTTNNBN

NVNNAAAGNVN
Transfac
Matys et al.(2006)
P$DOF3_01
0.593 0.593
PBF
M10438_2.00
Zea mays
BBDCTTTWNWD

HWNWAAAGHVV
Transfac
Matys et al.(2006)
P$PBF_01
0.593 0.593
DOF2.4
M01940_2.00
Arabidopsis thaliana
NCKTTWN

NWAAMGN
PBM
Weirauch et al.(2014)
pTH7912
0.576 0.576
PK23763.1
M01224_2.00
Cannabis sativa
NNNCTTTWN

NWAAAGNNN
PBM
Lambert et al.(2019)
pTH10194
0.576 0.576
DOF5.1
M06863_2.00
Arabidopsis thaliana
HYHYWYHHHYTTWNCTTTTTN

NAAAAAGNWAARDDDRWRDRD
Dap-seq
OMalley et al.(2016)
AT5G02460_col_a
0.576 0.576
DOF5.1
M06864_2.00
Arabidopsis thaliana
NHDYHRCTTTWTNNHNNHN

NDNNDNNAWAAAGYDRHDN
Dap-seq
OMalley et al.(2016)
AT5G02460_colamp_a
0.576 0.576
DOF2.4
M06841_2.00
Arabidopsis thaliana
HHWWTTHMCTTTTTN

NAAAAAGKDAAWWDD
Dap-seq
OMalley et al.(2016)
dof24_col_a
0.576 0.576
DOF2.4
M06842_2.00
Arabidopsis thaliana
HHMCTTTWTNNNNHN

NDNNNNAWAAAGKDD
Dap-seq
OMalley et al.(2016)
dof24_colamp_a
0.576 0.576
fgenesh1_pg.C_Chr_08.0001000114
M01957_2.00
Ostreococcus tauri
NCKWWNNN

NNNWWMGN
PBM
Weirauch et al.(2014)
pTH9431
0.559 0.559
DOF4.7
M01945_2.00
Arabidopsis thaliana
NCKTTHNNN

NNNDAAMGN
PBM
Weirauch et al.(2014)
pTH7189
0.542 0.542
DOF4.7
M06861_2.00
Arabidopsis thaliana
HHHHYHHHNHHHHHHHWWTWWCTTTTTN

NAAAAAGWWAWWDDDDDDDNDDDRDDDD
Dap-seq
OMalley et al.(2016)
At4g38000_col_a
0.542 0.542
DOF4.7
M06862_2.00
Arabidopsis thaliana
NYWACTTTWTB

VAWAAAGTWRN
Dap-seq
OMalley et al.(2016)
At4g38000_colamp_a
0.542 0.542
DOF4.3
M06857_2.00
Arabidopsis thaliana
AAAGNYRCTTT

AAAGYRNCTTT
Dap-seq
OMalley et al.(2016)
dof43_col_a
0.508 0.508
DOF4.3
M06858_2.00
Arabidopsis thaliana
NWAAAGHRVCTTTW

WAAAGBYDCTTTWN
Dap-seq
OMalley et al.(2016)
dof43_colamp_a
0.508 0.508
DOF4.5
M06859_2.00
Arabidopsis thaliana
AAAKYHDCTTTWTN

NAWAAAGHDRMTTT
Dap-seq
OMalley et al.(2016)
dof45_col_a
0.508 0.508
DOF4.5
M06860_2.00
Arabidopsis thaliana
WAAAGYYDCTTTWDN

NHWAAAGHRRCTTTW
Dap-seq
OMalley et al.(2016)
dof45_colamp_a
0.508 0.508
For this family, TFs with SR scores > 0.508 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_19593.1 Dof 28 86
MLOC_19593.2 Dof 28 86
MLOC_19593.3 Dof 104 162

Links

Other Dof family TFs
Other Hordeum vulgare TFs

1954 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYB61 Arabidopsis thaliana AT1G09540 D 0.000
AtMYB50 Arabidopsis thaliana AT1G57560 I 0.000
BGIOSGA001872 Oryza indica BGIOSGA001872 I 0.000
BGIOSGA019160 Oryza indica BGIOSGA019160 I 0.000
Bo5g009920 Brassica oleracea Bo5g009920 I 0.000
Bo8g111090 Brassica oleracea Bo8g111090 I 0.000
Bostr.25494s0012 Boechera stricta Bostr.25494s0012 I 0.000
Bra020016 Brassica rapa Bra020016 I 0.000
Bra031669 Brassica rapa Bra031669 I 0.000
BRADI2G36730 Brachypodium distachyon BRADI2G36730 I 0.000
Cagra.4395s0139 Capsella grandiflora Cagra.4395s0139 I 0.000
Carubv10009497m.g Capsella rubella Carubv10009497m.g I 0.000
cassava17679.valid.m1 Manihot esculenta cassava17679.valid.m1 I 0.000
chr1.CM0122.20.nc Lotus japonicus chr1.CM0122.20.nc I 0.000
chr5.CM0048.130.nc Lotus japonicus chr5.CM0048.130.nc I 0.000
Eucgr.B02197 Eucalyptus grandis Eucgr.B02197 I 0.000
Eucgr.H01337 Eucalyptus grandis Eucgr.H01337 I 0.000
F775_28584 Aegilops tauschii F775_28584 I 0.000
AtMYB50 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003728 I 0.000
Gorai.008G133700 Gossypium raimondii Gorai.008G133700 I 0.000
GRMZM2G017520 Zea mays GRMZM2G017520 I 0.000
GRMZM2G127490 Zea mays GRMZM2G127490 I 0.000
GRMZM2G171781 Zea mays GRMZM2G171781 I 0.000
GSMUA_Achr3G24580_001 Musa acuminata GSMUA_Achr3G24580_001 I 0.000
GSMUA_Achr7G17250_001 Musa acuminata GSMUA_Achr7G17250_001 I 0.000
LPERR01G10930 Leersia perrieri LPERR01G10930 I 0.000
LPERR05G02400 Leersia perrieri LPERR05G02400 I 0.000
Lus10038022.g Linum usitatissimum Lus10038022.g I 0.000
mgf003709m Mimulus guttatus mgf003709m I 0.000
MLOC_59663 Hordeum vulgare MLOC_59663 I 0.000
OB01G21720 Oryza brachyantha OB01G21720 I 0.000
OB05G12630 Oryza brachyantha OB05G12630 I 0.000
OBART01G11910 Oryza barthii OBART01G11910 I 0.000
OBART05G02690 Oryza barthii OBART05G02690 I 0.000
OGLUM01G13340 Oryza glumaepatula OGLUM01G13340 I 0.000
OGLUM05G02680 Oryza glumaepatula OGLUM05G02680 I 0.000
OLONG_008768 Oryza longistaminata OLONG_008768 I 0.000
OLONG_014417 Oryza longistaminata OLONG_014417 I 0.000
OMERI05G02610 Oryza meridionalis OMERI05G02610 I 0.000
ONIVA01G14120 Oryza nivara ONIVA01G14120 I 0.000
ONIVA05G02580 Oryza nivara ONIVA05G02580 I 0.000
OPUNC01G11600 Oryza punctata OPUNC01G11600 I 0.000
OPUNC05G02540 Oryza punctata OPUNC05G02540 I 0.000
ORGLA01G0100400 Oryza glaberrima ORGLA01G0100400 I 0.000
ORGLA05G0025500 Oryza glaberrima ORGLA05G0025500 I 0.000
ORUFI01G12800 Oryza rufipogon ORUFI01G12800 I 0.000
ORUFI05G02790 Oryza rufipogon ORUFI05G02790 I 0.000
OS01G0285300 Oryza sativa OS01G0285300 I 0.000
OS05G0140100 Oryza sativa OS05G0140100 I 0.000
Pavir.Ea01054 Panicum virgatum Pavir.Ea01054 I 0.000
Pavir.Eb01178 Panicum virgatum Pavir.Eb01178 I 0.000
Pavir.J31344 Panicum virgatum Pavir.J31344 I 0.000
Pavir.J40848 Panicum virgatum Pavir.J40848 I 0.000
PGSC0003DMG400018279 Solanum tuberosum PGSC0003DMG400018279 I 0.000
Sb03g011640 Sorghum bicolor Sb03g011640 I 0.000
Sb09g003100 Sorghum bicolor Sb09g003100 I 0.000
MYB61 Arabidopsis lyrata scaffold_100991.1 I 0.000
Si001565m.g Setaria italica Si001565m.g I 0.000
Si022113m.g Setaria italica Si022113m.g I 0.000
Solyc01g102340.2 Solanum lycopersicum Solyc01g102340.2 I 0.000
Thhalv10008000m.g Eutrema salsugineum Thhalv10008000m.g I 0.000
Thhalv10023601m.g Eutrema salsugineum Thhalv10023601m.g I 0.000
Thhalv10028778m.g Eutrema salsugineum Thhalv10028778m.g I 0.000
Traes_1AS_1EE692FDC Triticum aestivum Traes_1AS_1EE692FDC I 0.000
Traes_1BS_92EA1F290 Triticum aestivum Traes_1BS_92EA1F290 I 0.000
Traes_1DS_5BAD8947E Triticum aestivum Traes_1DS_5BAD8947E I 0.000
VIT_14s0060g00240 Vitis vinifera VIT_14s0060g00240 I 0.000