MTR_1g055265 (Medicago truncatula)
Dof

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02701 (zf-Dof) IPR003851 MTR_1g055265 T170678_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DOF1.7
M06833_2.00 		Arabidopsis thaliana
HNNHWTYWNCTTTTYNHNHHN
NDDNDNRAAAAGNWRAWDNND		 Dap-seq
OMalley et al.(2016)
Adof1_col_a 		0.611 0.611
DOF1.7
M06834_2.00 		Arabidopsis thaliana
NNHNNYWRCTTTTTNNHHNNH
DNNDDNNAAAAAGYWRNNDNN		 Dap-seq
OMalley et al.(2016)
Adof1_colamp_a 		0.611 0.611
PK01144.1
M01213_2.00 		Cannabis sativa
NCTTTWN
NWAAAGN		 PBM
Lambert et al.(2019)
pTH10160 		0.583 0.583
DOF5.6
M01063_2.00 		Arabidopsis thaliana
NYDDWNNNN
NNNNWHHRN		 PBM
Sullivan et al.(2014)
pTH7192 		0.528 0.528
DOF5.6
M01950_2.00 		Arabidopsis thaliana
NCKTTWNN
NNWAAMGN		 PBM
Weirauch et al.(2014)
pTH7655 		0.528 0.528
PK05671.1
M01215_2.00 		Cannabis sativa
NCDWWNNN
NNNWWHGN		 PBM
Lambert et al.(2019)
pTH10101 		0.528 0.528
PK20317.1
M01221_2.00 		Cannabis sativa
CKTTWNN
NNWAAMG		 PBM
Lambert et al.(2019)
pTH11298 		0.528 0.528
DOF5.6
M06867_2.00 		Arabidopsis thaliana
HHTYHNCTTTTTNHHHHHHHH
DDDDDDDDNAAAAAGNDRADD		 Dap-seq
OMalley et al.(2016)
At5g62940_col_a 		0.528 0.528
For this family, TFs with SR scores > 0.508 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH41847 Dof 10 45

Links

Other Dof family TFs
Other Medicago truncatula TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_2g030030 Medicago truncatula MTR_2g030030 I 0.839
MTR_7g082600 Medicago truncatula MTR_7g082600 I 0.833
MTR_1g115590 Medicago truncatula MTR_1g115590 I 0.703
MTR_8g015840 Medicago truncatula MTR_8g015840 I 0.694
Ca_10106 Cicer arietinum Ca_10106 I 0.667
POPTR_0003s02890 Populus trichocarpa POPTR_0003s02890 I 0.639
Gorai.011G067500 Gossypium raimondii Gorai.011G067500 I 0.639
GLYMA07G01461 Glycine max GLYMA07G01461 I 0.611
Eucgr.J02884 Eucalyptus grandis Eucgr.J02884 I 0.611
GLYMA08G20840 Glycine max GLYMA08G20840 I 0.611
evm.TU.supercontig_131.40 Carica papaya evm.TU.supercontig_131.40 I 0.611
chr4.CM0692.530.nd Lotus japonicus chr4.CM0692.530.nd I 0.611
AMTR_s00036p00232310 Amborella trichopoda AMTR_s00036p00232310 I 0.611
ADOF2 Vitis vinifera VIT_09s0002g02490 I 0.611
mgf022004m Mimulus guttatus mgf022004m I 0.611
27395.m000081 Ricinus communis 27395.m000081 I 0.611
gene23108-v1.0-hybrid Fragaria vesca gene23108-v1.0-hybrid I 0.583
cassava212.valid.m1 Manihot esculenta cassava212.valid.m1 I 0.583
Bo6g042440 Brassica oleracea Bo6g042440 I 0.583
Bostr.26675s0029 Boechera stricta Bostr.26675s0029 I 0.583
Solyc06g062520.1 Solanum lycopersicum Solyc06g062520.1 I 0.583
Pm013373 Prunus mume Pm013373 I 0.583
Aquca_001_00128 Aquilegia coerulea Aquca_001_00128 I 0.583
Cagra.15243s0002 Capsella grandiflora Cagra.15243s0002 I 0.583
Carubv10011461m.g Capsella rubella Carubv10011461m.g I 0.583
PRUPE_ppa011022mg Prunus persica PRUPE_ppa011022mg I 0.583
Bra030423 Brassica rapa Bra030423 I 0.583
GSMUA_Achr2G15700_001 Musa acuminata GSMUA_Achr2G15700_001 I 0.583
Bo1g107170 Brassica oleracea Bo1g107170 I 0.583
PK01144.1 Cannabis sativa PK01144.1 D 0.583
ADOF1 Arabidopsis lyrata fgenesh2_kg.1__4241__AT1G51700.1 I 0.583
MDP0000224390 Malus domestica MDP0000224390 I 0.556
Eucgr.F03105 Eucalyptus grandis Eucgr.F03105 I 0.556
Thhalv10011811m.g Eutrema salsugineum Thhalv10011811m.g I 0.556
Ca_03849 Cicer arietinum Ca_03849 I 0.548
SapurV1A.0011s0080 Salix purpurea SapurV1A.0011s0080 I 0.528
Cagra.1671s0385 Capsella grandiflora Cagra.1671s0385 I 0.528
Pavir.Ea00244 Panicum virgatum Pavir.Ea00244 I 0.528
Aquca_015_00212 Aquilegia coerulea Aquca_015_00212 I 0.528
PK05671.1 Cannabis sativa PK05671.1 D 0.528
mgf013920m Mimulus guttatus mgf013920m I 0.528
mgf021408m Mimulus guttatus mgf021408m I 0.528
Thhalv10005662m.g Eutrema salsugineum Thhalv10005662m.g I 0.528
Bostr.0568s0516 Boechera stricta Bostr.0568s0516 I 0.528
Cagra.5118s0027 Capsella grandiflora Cagra.5118s0027 I 0.528
SapurV1A.0393s0060 Salix purpurea SapurV1A.0393s0060 I 0.528
Ciclev10021278m.g Citrus clementina Ciclev10021278m.g I 0.528
Gorai.011G104000 Gossypium raimondii Gorai.011G104000 I 0.528
Cucsa.113470 Cucumis sativus Cucsa.113470 I 0.528
MDP0000255017 Malus domestica MDP0000255017 I 0.528
Lus10015425.g Linum usitatissimum Lus10015425.g I 0.528
Lus10035955.g Linum usitatissimum Lus10035955.g I 0.528
Lus10025707.g Linum usitatissimum Lus10025707.g I 0.528
MDP0000255023 Malus domestica MDP0000255023 I 0.528
Gorai.005G105200 Gossypium raimondii Gorai.005G105200 I 0.528
orange1.1g024786m.g Citrus sinensis orange1.1g024786m.g I 0.528
Carubv10026609m.g Capsella rubella Carubv10026609m.g I 0.528
orange1.1g021633m.g Citrus sinensis orange1.1g021633m.g I 0.528
evm.TU.contig_34071 Carica papaya evm.TU.contig_34071 I 0.528
gene32187-v1.0-hybrid Fragaria vesca gene32187-v1.0-hybrid I 0.528
MDP0000315316 Malus domestica MDP0000315316 I 0.528
Carubv10011378m.g Capsella rubella Carubv10011378m.g I 0.528
Cla014311 Citrullus lanatus Cla014311 I 0.528
MTR_3g077750 Medicago truncatula MTR_3g077750 I 0.528
Bo3g106920 Brassica oleracea Bo3g106920 I 0.528
MLOC_74620 Hordeum vulgare MLOC_74620 I 0.528
GRMZM2G176063 Zea mays GRMZM2G176063 I 0.528
MTR_7g024670 Medicago truncatula MTR_7g024670 I 0.528
DOF5.6 Arabidopsis thaliana AT5G62940 D 0.528
POPTR_0015s08810 Populus trichocarpa POPTR_0015s08810 I 0.528
POPTR_0012s08280 Populus trichocarpa POPTR_0012s08280 I 0.528
PGSC0003DMG400027089 Solanum tuberosum PGSC0003DMG400027089 I 0.528
GLYMA17G09710 Glycine max GLYMA17G09710 I 0.528
GLYMA04G35650 Glycine max GLYMA04G35650 I 0.528
Bra010136 Brassica rapa Bra010136 I 0.528
Bo9g016320 Brassica oleracea Bo9g016320 I 0.528
Bo8g079910 Brassica oleracea Bo8g079910 I 0.528
Bra014297 Brassica rapa Bra014297 I 0.528
Bra020261 Brassica rapa Bra020261 I 0.528
BRADI4G04260 Brachypodium distachyon BRADI4G04260 I 0.528
Bra036082 Brassica rapa Bra036082 I 0.528
Bra035873 Brassica rapa Bra035873 I 0.528
Cucsa.098430 Cucumis sativus Cucsa.098430 I 0.528
PRUPE_ppa015648mg Prunus persica PRUPE_ppa015648mg I 0.528
AMTR_s00030p00156320 Amborella trichopoda AMTR_s00030p00156320 I 0.528
Ca_07488 Cicer arietinum Ca_07488 I 0.528
HCA2 Vitis vinifera VIT_17s0000g08290 I 0.528
Cla000993 Citrullus lanatus Cla000993 I 0.528
Bo3g181400 Brassica oleracea Bo3g181400 I 0.528
cassava17627.valid.m1 Manihot esculenta cassava17627.valid.m1 I 0.528
30147.m013945 Ricinus communis 30147.m013945 I 0.528
Pm024734 Prunus mume Pm024734 I 0.528
HCA2 Arabidopsis lyrata scaffold_802976.1 I 0.528
Traes_5DS_4673CFE71 Triticum aestivum Traes_5DS_4673CFE71 I 0.528
TCM_000526 Theobroma cacao TCM_000526 I 0.528
Solyc06g071480.2 Solanum lycopersicum Solyc06g071480.2 I 0.528
Solyc03g112930.2 Solanum lycopersicum Solyc03g112930.2 I 0.528
Traes_5BS_037093F0B Triticum aestivum Traes_5BS_037093F0B I 0.528
TCM_012077 Theobroma cacao TCM_012077 I 0.528
TRAES3BF155500010CFD_g Triticum aestivum TRAES3BF155500010CFD_g I 0.528
TCM_033928 Theobroma cacao TCM_033928 I 0.528
SELMODRAFT_19628 Selaginella moellendorffii SELMODRAFT_19628 I 0.528
Si002728m.g Setaria italica Si002728m.g I 0.528
SapurV1A.2125s0010 Salix purpurea SapurV1A.2125s0010 I 0.519
SapurV1A.0032s0330 Salix purpurea SapurV1A.0032s0330 I 0.519