MTR_1g115590 (Medicago truncatula)
Dof

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02701 (zf-Dof) IPR003851 MTR_1g115590 T170681_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DOF1.7
M06833_2.00 		Arabidopsis thaliana
HNNHWTYWNCTTTTYNHNHHN
NDDNDNRAAAAGNWRAWDNND		 Dap-seq
OMalley et al.(2016)
Adof1_col_a 		0.595 0.595
DOF1.7
M06834_2.00 		Arabidopsis thaliana
NNHNNYWRCTTTTTNNHHNNH
DNNDDNNAAAAAGYWRNNDNN		 Dap-seq
OMalley et al.(2016)
Adof1_colamp_a 		0.595 0.595
PK01144.1
M01213_2.00 		Cannabis sativa
NCTTTWN
NWAAAGN		 PBM
Lambert et al.(2019)
pTH10160 		0.568 0.568
DOF5.6
M01063_2.00 		Arabidopsis thaliana
NYDDWNNNN
NNNNWHHRN		 PBM
Sullivan et al.(2014)
pTH7192 		0.514 0.514
DOF5.6
M01950_2.00 		Arabidopsis thaliana
NCKTTWNN
NNWAAMGN		 PBM
Weirauch et al.(2014)
pTH7655 		0.514 0.514
PK05671.1
M01215_2.00 		Cannabis sativa
NCDWWNNN
NNNWWHGN		 PBM
Lambert et al.(2019)
pTH10101 		0.514 0.514
PK20317.1
M01221_2.00 		Cannabis sativa
CKTTWNN
NNWAAMG		 PBM
Lambert et al.(2019)
pTH11298 		0.514 0.514
DOF5.6
M06867_2.00 		Arabidopsis thaliana
HHTYHNCTTTTTNHHHHHHHH
DDDDDDDDNAAAAAGNDRADD		 Dap-seq
OMalley et al.(2016)
At5g62940_col_a 		0.514 0.514
For this family, TFs with SR scores > 0.508 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH44515 Dof 8 45

Links

Other Dof family TFs
Other Medicago truncatula TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_2g030030 Medicago truncatula MTR_2g030030 I 1.000
MTR_1g055265 Medicago truncatula MTR_1g055265 I 0.703
MTR_7g082600 Medicago truncatula MTR_7g082600 I 0.703
MTR_8g015840 Medicago truncatula MTR_8g015840 I 0.676
Ca_10106 Cicer arietinum Ca_10106 I 0.649
POPTR_0003s02890 Populus trichocarpa POPTR_0003s02890 I 0.622
Gorai.011G067500 Gossypium raimondii Gorai.011G067500 I 0.622
GLYMA13G42820 Glycine max GLYMA13G42820 I 0.595
GLYMA08G20840 Glycine max GLYMA08G20840 I 0.595
GLYMA07G01461 Glycine max GLYMA07G01461 I 0.595
chr4.CM0692.530.nd Lotus japonicus chr4.CM0692.530.nd I 0.595
GLYMA15G02620 Glycine max GLYMA15G02620 I 0.595
ADOF2 Vitis vinifera VIT_09s0002g02490 I 0.595
AMTR_s00036p00232310 Amborella trichopoda AMTR_s00036p00232310 I 0.595
DOF1.7 Arabidopsis thaliana AT1G51700 D 0.595
GSMUA_Achr10G27560_001 Musa acuminata GSMUA_Achr10G27560_001 I 0.595
MDP0000273251 Malus domestica MDP0000273251 I 0.595
Eucgr.J02884 Eucalyptus grandis Eucgr.J02884 I 0.595
MDP0000120805 Malus domestica MDP0000120805 I 0.595
27395.m000081 Ricinus communis 27395.m000081 I 0.595
evm.TU.supercontig_131.40 Carica papaya evm.TU.supercontig_131.40 I 0.595
mgf022004m Mimulus guttatus mgf022004m I 0.595
gene23108-v1.0-hybrid Fragaria vesca gene23108-v1.0-hybrid I 0.568
Cagra.15243s0002 Capsella grandiflora Cagra.15243s0002 I 0.568
PRUPE_ppa011022mg Prunus persica PRUPE_ppa011022mg I 0.568
Bostr.26675s0029 Boechera stricta Bostr.26675s0029 I 0.568
Aquca_001_00128 Aquilegia coerulea Aquca_001_00128 I 0.568
PGSC0003DMG400002507 Solanum tuberosum PGSC0003DMG400002507 I 0.568
Solyc06g062520.1 Solanum lycopersicum Solyc06g062520.1 I 0.568
Solyc03g121400.1 Solanum lycopersicum Solyc03g121400.1 I 0.568
Carubv10011461m.g Capsella rubella Carubv10011461m.g I 0.568
GSMUA_Achr2G15700_001 Musa acuminata GSMUA_Achr2G15700_001 I 0.568
Bo6g042440 Brassica oleracea Bo6g042440 I 0.568
cassava31511.valid.m1 Manihot esculenta cassava31511.valid.m1 I 0.568
PK01144.1 Cannabis sativa PK01144.1 D 0.568
cassava212.valid.m1 Manihot esculenta cassava212.valid.m1 I 0.568
Bo1g107170 Brassica oleracea Bo1g107170 I 0.568
PK15579.1 Cannabis sativa PK15579.1 I 0.568
Pm013373 Prunus mume Pm013373 I 0.568
Bra030423 Brassica rapa Bra030423 I 0.568
GSMUA_Achr4G30860_001 Musa acuminata GSMUA_Achr4G30860_001 I 0.568
ADOF1 Arabidopsis lyrata fgenesh2_kg.1__4241__AT1G51700.1 I 0.568
MDP0000224390 Malus domestica MDP0000224390 I 0.541
Eucgr.F03105 Eucalyptus grandis Eucgr.F03105 I 0.541
Ciclev10002237m.g Citrus clementina Ciclev10002237m.g I 0.541
LjT13A22.20.nc Lotus japonicus LjT13A22.20.nc I 0.541
orange1.1g043493m.g Citrus sinensis orange1.1g043493m.g I 0.541
Thhalv10011811m.g Eutrema salsugineum Thhalv10011811m.g I 0.541
VIT_18s0001g11310 Vitis vinifera VIT_18s0001g11310 I 0.541
Cagra.5118s0027 Capsella grandiflora Cagra.5118s0027 I 0.514
Cucsa.103860 Cucumis sativus Cucsa.103860 I 0.514
Aquca_027_00116 Aquilegia coerulea Aquca_027_00116 I 0.514
Cagra.1671s0385 Capsella grandiflora Cagra.1671s0385 I 0.514
Cucsa.113470 Cucumis sativus Cucsa.113470 I 0.514
mgf021408m Mimulus guttatus mgf021408m I 0.514
mgf022972m Mimulus guttatus mgf022972m I 0.514
Aquca_015_00212 Aquilegia coerulea Aquca_015_00212 I 0.514
mgf013920m Mimulus guttatus mgf013920m I 0.514
Bostr.0568s0516 Boechera stricta Bostr.0568s0516 I 0.514
Cucsa.098430 Cucumis sativus Cucsa.098430 I 0.514
Lus10025707.g Linum usitatissimum Lus10025707.g I 0.514
Pavir.Ca02598 Panicum virgatum Pavir.Ca02598 I 0.514
orange1.1g024786m.g Citrus sinensis orange1.1g024786m.g I 0.514
orange1.1g021633m.g Citrus sinensis orange1.1g021633m.g I 0.514
MDP0000315316 Malus domestica MDP0000315316 I 0.514
Pavir.Ea00244 Panicum virgatum Pavir.Ea00244 I 0.514
Pavir.J05047 Panicum virgatum Pavir.J05047 I 0.514
PK05671.1 Cannabis sativa PK05671.1 D 0.514
Thhalv10005662m.g Eutrema salsugineum Thhalv10005662m.g I 0.514
SapurV1A.0393s0060 Salix purpurea SapurV1A.0393s0060 I 0.514
SapurV1A.0011s0080 Salix purpurea SapurV1A.0011s0080 I 0.514
MDP0000256881 Malus domestica MDP0000256881 I 0.514
MDP0000255023 Malus domestica MDP0000255023 I 0.514
gene32187-v1.0-hybrid Fragaria vesca gene32187-v1.0-hybrid I 0.514
evm.TU.contig_34071 Carica papaya evm.TU.contig_34071 I 0.514
Ciclev10021278m.g Citrus clementina Ciclev10021278m.g I 0.514
Carubv10026609m.g Capsella rubella Carubv10026609m.g I 0.514
Gorai.005G105200 Gossypium raimondii Gorai.005G105200 I 0.514
Gorai.011G104000 Gossypium raimondii Gorai.011G104000 I 0.514
MDP0000255017 Malus domestica MDP0000255017 I 0.514
Lus10035955.g Linum usitatissimum Lus10035955.g I 0.514
cassava17893.valid.m1 Manihot esculenta cassava17893.valid.m1 I 0.514
Lus10015425.g Linum usitatissimum Lus10015425.g I 0.514
Carubv10011378m.g Capsella rubella Carubv10011378m.g I 0.514
Traes_5DS_4673CFE71 Triticum aestivum Traes_5DS_4673CFE71 I 0.514
MLOC_74620 Hordeum vulgare MLOC_74620 I 0.514
MTR_3g077750 Medicago truncatula MTR_3g077750 I 0.514
LPERR12G13550 Leersia perrieri LPERR12G13550 I 0.514
GRMZM2G176063 Zea mays GRMZM2G176063 I 0.514
GLYMA17G09710 Glycine max GLYMA17G09710 I 0.514
GRMZM2G123900 Zea mays GRMZM2G123900 I 0.514
MTR_7g024670 Medicago truncatula MTR_7g024670 I 0.514
MTR_8g079060 Medicago truncatula MTR_8g079060 I 0.514
OS12G0569900 Oryza sativa OS12G0569900 I 0.514
PGSC0003DMG400018090 Solanum tuberosum PGSC0003DMG400018090 I 0.514
ONIVA02G22000 Oryza nivara ONIVA02G22000 I 0.514
OMERI08G15740 Oryza meridionalis OMERI08G15740 I 0.514
OGLUM12G17840 Oryza glumaepatula OGLUM12G17840 I 0.514
GLYMA04G35650 Glycine max GLYMA04G35650 I 0.514
BRADI4G04260 Brachypodium distachyon BRADI4G04260 I 0.514
Bo3g106920 Brassica oleracea Bo3g106920 I 0.514
Bo3g181400 Brassica oleracea Bo3g181400 I 0.514
Bo2g025060 Brassica oleracea Bo2g025060 I 0.514
Bo1g084780 Brassica oleracea Bo1g084780 I 0.514
DOF5.6 Arabidopsis thaliana AT5G62940 D 0.514
Bo8g079910 Brassica oleracea Bo8g079910 I 0.514
Bo9g016320 Brassica oleracea Bo9g016320 I 0.514
Bra035873 Brassica rapa Bra035873 I 0.514
Bra036082 Brassica rapa Bra036082 I 0.514
Bra020261 Brassica rapa Bra020261 I 0.514
Bra014297 Brassica rapa Bra014297 I 0.514
Bra010136 Brassica rapa Bra010136 I 0.514
PGSC0003DMG400027089 Solanum tuberosum PGSC0003DMG400027089 I 0.514
POPTR_0005s13990 Populus trichocarpa POPTR_0005s13990 I 0.514
AMTR_s00030p00156320 Amborella trichopoda AMTR_s00030p00156320 I 0.514
HCA2 Vitis vinifera VIT_17s0000g08290 I 0.514
Traes_5BS_037093F0B Triticum aestivum Traes_5BS_037093F0B I 0.514
TRAES3BF155500010CFD_g Triticum aestivum TRAES3BF155500010CFD_g I 0.514
TCM_012077 Theobroma cacao TCM_012077 I 0.514
TCM_033928 Theobroma cacao TCM_033928 I 0.514
Ca_07488 Cicer arietinum Ca_07488 I 0.514
Ca_09234 Cicer arietinum Ca_09234 I 0.514
30147.m013945 Ricinus communis 30147.m013945 I 0.514
cassava13877.valid.m1 Manihot esculenta cassava13877.valid.m1 I 0.514
Pm024734 Prunus mume Pm024734 I 0.514
Cla014311 Citrullus lanatus Cla014311 I 0.514
Cla000993 Citrullus lanatus Cla000993 I 0.514
TCM_000526 Theobroma cacao TCM_000526 I 0.514
Solyc06g071480.2 Solanum lycopersicum Solyc06g071480.2 I 0.514
PRUPE_ppa015648mg Prunus persica PRUPE_ppa015648mg I 0.514
PRUPE_ppa024033mg Prunus persica PRUPE_ppa024033mg I 0.514
POPTR_0015s08810 Populus trichocarpa POPTR_0015s08810 I 0.514
POPTR_0012s08280 Populus trichocarpa POPTR_0012s08280 I 0.514
POPTR_0007s11790 Populus trichocarpa POPTR_0007s11790 I 0.514
Sb08g018760 Sorghum bicolor Sb08g018760 I 0.514
HCA2 Arabidopsis lyrata scaffold_802976.1 I 0.514
Si022683m.g Setaria italica Si022683m.g I 0.514
Solyc03g112930.2 Solanum lycopersicum Solyc03g112930.2 I 0.514
Si002728m.g Setaria italica Si002728m.g I 0.514
SELMODRAFT_439283 Selaginella moellendorffii SELMODRAFT_439283 I 0.514
SELMODRAFT_19628 Selaginella moellendorffii SELMODRAFT_19628 I 0.514
cassava17627.valid.m1 Manihot esculenta cassava17627.valid.m1 I 0.514