scaffold_201282.1 (Arabidopsis lyrata)
Dof

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02701 (zf-Dof) IPR003851 scaffold_201282.1 T171091_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DOF5.7
M00862_2.00 		Arabidopsis thaliana
NNNCKTTN
NAAMGNNN		 PBM
Franco-Zorrilla et al.(2014)
Dof5.7 		0.577 0.577
PK10955.1
M01217_2.00 		Cannabis sativa
VCTTTWNN
NNWAAAGB		 PBM
Lambert et al.(2019)
pTH10264 		0.538 0.538
PBF
M02675_2.00 		Zea mays
RCTTT
AAAGY		 SELEX
Mathelier et al.(2014)
MA0064.1 		0.538 0.538
PBF
M10438_2.00 		Zea mays
BBDCTTTWNWD
HWNWAAAGHVV		 Transfac
Matys et al.(2006)
P$PBF_01 		0.538 0.538
For this family, TFs with SR scores > 0.508 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_201282.1 Dof 10 35

Links

Other Dof family TFs
Other Arabidopsis lyrata TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm026481 Prunus mume Pm026481 I 0.577
DOF5.7 Arabidopsis thaliana AT5G65590 D 0.577
PRUPE_ppa008556mg Prunus persica PRUPE_ppa008556mg I 0.577
Cucsa.260210 Cucumis sativus Cucsa.260210 I 0.577
mgf020517m Mimulus guttatus mgf020517m I 0.577
Thhalv10004632m.g Eutrema salsugineum Thhalv10004632m.g I 0.577
Bostr.10689s0057 Boechera stricta Bostr.10689s0057 I 0.577
Bostr.0568s0229 Boechera stricta Bostr.0568s0229 I 0.577
GSMUA_Achr10G08280_001 Musa acuminata GSMUA_Achr10G08280_001 I 0.577
Cla000615 Citrullus lanatus Cla000615 I 0.577
Bo3g097960 Brassica oleracea Bo3g097960 I 0.577
Bra037822 Brassica rapa Bra037822 I 0.577
fgenesh2_kg.8__2607__AT5G65590.1 Arabidopsis lyrata fgenesh2_kg.8__2607__AT5G65590.1 I 0.577
Eucgr.H01990 Eucalyptus grandis Eucgr.H01990 I 0.538
evm.TU.supercontig_55.3 Carica papaya evm.TU.supercontig_55.3 I 0.538
evm.TU.supercontig_6.406 Carica papaya evm.TU.supercontig_6.406 I 0.538
gene20703-v1.0-hybrid Fragaria vesca gene20703-v1.0-hybrid I 0.538
Ciclev10026011m.g Citrus clementina Ciclev10026011m.g I 0.538
GLYMA11G06300 Glycine max GLYMA11G06300 I 0.538
Aquca_010_00309 Aquilegia coerulea Aquca_010_00309 I 0.538
Bra031853 Brassica rapa Bra031853 I 0.538
Bostr.10689s0053 Boechera stricta Bostr.10689s0053 I 0.538
Gorai.003G036800 Gossypium raimondii Gorai.003G036800 I 0.538
Gorai.008G072900 Gossypium raimondii Gorai.008G072900 I 0.538
Bo2g168270 Brassica oleracea Bo2g168270 I 0.538
Thhalv10027080m.g Eutrema salsugineum Thhalv10027080m.g I 0.538
chr2.CM0177.80.nd Lotus japonicus chr2.CM0177.80.nd I 0.538
orange1.1g041420m.g Citrus sinensis orange1.1g041420m.g I 0.538
MDP0000313040 Malus domestica MDP0000313040 I 0.538
Gorai.008G094000 Gossypium raimondii Gorai.008G094000 I 0.538
Gorai.011G104200 Gossypium raimondii Gorai.011G104200 I 0.538
MDP0000249827 Malus domestica MDP0000249827 I 0.538
mgf023767m Mimulus guttatus mgf023767m I 0.538
GSMUA_Achr10G09190_001 Musa acuminata GSMUA_Achr10G09190_001 I 0.538
PRUPE_ppa019209mg Prunus persica PRUPE_ppa019209mg I 0.538
ATDOF4.2 Arabidopsis lyrata scaffold_702321.1 I 0.538
TCM_000549 Theobroma cacao TCM_000549 I 0.538
GLYMA09G33350 Glycine max GLYMA09G33350 I 0.538
POPTR_0007s11620 Populus trichocarpa POPTR_0007s11620 I 0.538
MTR_8g479350 Medicago truncatula MTR_8g479350 I 0.538
PGSC0003DMG400010027 Solanum tuberosum PGSC0003DMG400010027 I 0.538
POPTR_0005s14080 Populus trichocarpa POPTR_0005s14080 I 0.538
TCM_000956 Theobroma cacao TCM_000956 I 0.538
VIT_00s0218g00040 Vitis vinifera VIT_00s0218g00040 I 0.538
cassava33248.m1 Manihot esculenta cassava33248.m1 I 0.538
cassava45186.m1 Manihot esculenta cassava45186.m1 I 0.538
PBF Zea mays GRMZM2G146283 D 0.538
cassava20059.m1 Manihot esculenta cassava20059.m1 I 0.538
GLYMA01G02610 Glycine max GLYMA01G02610 I 0.538
Ca_09238 Cicer arietinum Ca_09238 I 0.538
Ca_11553 Cicer arietinum Ca_11553 I 0.538
GLYMA01G38970 Glycine max GLYMA01G38970 I 0.538
MTR_5g031440 Medicago truncatula MTR_5g031440 I 0.538