SELMODRAFT_19632 (Selaginella moellendorffii)
Dof

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02701 (zf-Dof) IPR003851 SELMODRAFT_19632 T171108_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DOF3.1
M01942_2.00 		Arabidopsis thaliana
NCKTTNNN
NNNAAMGN		 PBM
Weirauch et al.(2014)
pTH8190 		0.583 0.583
DOF3.2
M01943_2.00 		Arabidopsis thaliana
NHDNNNNN
NNNNNHDN		 PBM
Weirauch et al.(2014)
pTH7183 		0.583 0.583
DOF1.6
M06831_2.00 		Arabidopsis thaliana
HYACTTTWNNN
NNNWAAAGTRD		 Dap-seq
OMalley et al.(2016)
AT1G47655_col_a 		0.583 0.583
DOF1.6
M06832_2.00 		Arabidopsis thaliana
YYYTTDNCTTTWYBN
NVRWAAAGNHAARRR		 Dap-seq
OMalley et al.(2016)
AT1G47655_colamp_a 		0.583 0.583
DOF3.2
M06847_2.00 		Arabidopsis thaliana
NYHVCTTTTTNNHHTHHNN
NNDDADDNNAAAAAGBDRN		 Dap-seq
OMalley et al.(2016)
At3g45610_col_a 		0.583 0.583
DOF3.2
M06848_2.00 		Arabidopsis thaliana
NNHDDYHVCTTTTTB
VAAAAAGBDRHHDNN		 Dap-seq
OMalley et al.(2016)
At3g45610_colamp_a 		0.583 0.583
Dof2
M02674_2.00 		Zea mays
NGCTTT
AAAGCN		 SELEX
Mathelier et al.(2014)
MA0020.1 		0.583 0.583
MNB1A
M02677_2.00 		Zea mays
DCTTT
AAAGH		 SELEX
Mathelier et al.(2014)
MA0053.1 		0.583 0.583
MNB1A
M10440_2.00 		Zea mays
NNDCTTTWNNN
NNNWAAAGHNN		 Transfac
Matys et al.(2006)
P$DOF1_01 		0.583 0.583
Dof2
M10436_2.00 		Zea mays
NNDCTTTWNND
HNNWAAAGHNN		 Transfac
Matys et al.(2006)
P$DOF2_01 		0.583 0.583
Dof2
M10437_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DOF_Q2 		0.583 0.583
DOF5.3
M01947_2.00 		Arabidopsis thaliana
CKTTNNN
NNNAAMG		 PBM
Weirauch et al.(2014)
pTH7182 		0.562 0.562
DOF5.6
M01063_2.00 		Arabidopsis thaliana
NYDDWNNNN
NNNNWHHRN		 PBM
Sullivan et al.(2014)
pTH7192 		0.562 0.562
DOF5.6
M01950_2.00 		Arabidopsis thaliana
NCKTTWNN
NNWAAMGN		 PBM
Weirauch et al.(2014)
pTH7655 		0.562 0.562
PK15337.1
M01219_2.00 		Cannabis sativa
NCTTTHN
NDAAAGN		 PBM
Lambert et al.(2019)
pTH10186 		0.562 0.562
AT3G52440
M06852_2.00 		Arabidopsis thaliana
DYHMCTTTWTN
NAWAAAGKDRH		 Dap-seq
OMalley et al.(2016)
AT3G52440_col_a 		0.562 0.562
AT3G52440
M06853_2.00 		Arabidopsis thaliana
WWDDYHMCTTTTTNNHHYYWW
WWRRDDNNAAAAAGKDRHHWW		 Dap-seq
OMalley et al.(2016)
AT3G52440_colamp_a 		0.562 0.562
DOF5.6
M06867_2.00 		Arabidopsis thaliana
HHTYHNCTTTTTNHHHHHHHH
DDDDDDDDNAAAAAGNDRADD		 Dap-seq
OMalley et al.(2016)
At5g62940_col_a 		0.562 0.562
PBF
M02675_2.00 		Zea mays
RCTTT
AAAGY		 SELEX
Mathelier et al.(2014)
MA0064.1 		0.562 0.562
PBF
M10438_2.00 		Zea mays
BBDCTTTWNWD
HWNWAAAGHVV		 Transfac
Matys et al.(2006)
P$PBF_01 		0.562 0.562
Q6RK62_WHEAT
M10441_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PBF_Q2_01 		0.562 0.562
DOF2.5
M01212_2.00 		Arabidopsis thaliana
NNNCKTTWNN
NNWAAMGNNN		 PBM
Lambert et al.(2019)
pTH11562 		0.542 0.542
DOF4.7
M01945_2.00 		Arabidopsis thaliana
NCKTTHNNN
NNNDAAMGN		 PBM
Weirauch et al.(2014)
pTH7189 		0.542 0.542
DOF5.4
M01948_2.00 		Arabidopsis thaliana
NDCGTTAWCN
NGWTAACGHN		 PBM
Weirauch et al.(2014)
pTH7160 		0.542 0.542
DOF5.4
M01949_2.00 		Arabidopsis thaliana
NWACGTTWHNN
NNDWAACGTWN		 PBM
Weirauch et al.(2014)
pTH7535 		0.542 0.542
DOF5.7
M00862_2.00 		Arabidopsis thaliana
NNNCKTTN
NAAMGNNN		 PBM
Franco-Zorrilla et al.(2014)
Dof5.7 		0.542 0.542
estExt_fgenesh1_pg.C_370003
M01954_2.00 		Physcomitrella patens
NNNNHDNNNN
NNNNHDNNNN		 PBM
Weirauch et al.(2014)
pTH8469 		0.542 0.542
PK07031.1
M01216_2.00 		Cannabis sativa
NCKTTHN
NDAAMGN		 PBM
Lambert et al.(2019)
pTH11435 		0.542 0.542
PK10955.1
M01217_2.00 		Cannabis sativa
VCTTTWNN
NNWAAAGB		 PBM
Lambert et al.(2019)
pTH10264 		0.542 0.542
PK14080.1
M01218_2.00 		Cannabis sativa
NCDTTHNN
NNDAAHGN		 PBM
Lambert et al.(2019)
pTH10123 		0.542 0.542
PK20317.1
M01221_2.00 		Cannabis sativa
CKTTWNN
NNWAAMG		 PBM
Lambert et al.(2019)
pTH11298 		0.542 0.542
DOF1.7
M06833_2.00 		Arabidopsis thaliana
HNNHWTYWNCTTTTYNHNHHN
NDDNDNRAAAAGNWRAWDNND		 Dap-seq
OMalley et al.(2016)
Adof1_col_a 		0.542 0.542
DOF1.7
M06834_2.00 		Arabidopsis thaliana
NNHNNYWRCTTTTTNNHHNNH
DNNDDNNAAAAAGYWRNNDNN		 Dap-seq
OMalley et al.(2016)
Adof1_colamp_a 		0.542 0.542
DOF4.7
M06861_2.00 		Arabidopsis thaliana
HHHHYHHHNHHHHHHHWWTWWCTTTTTN
NAAAAAGWWAWWDDDDDDDNDDDRDDDD		 Dap-seq
OMalley et al.(2016)
At4g38000_col_a 		0.542 0.542
DOF4.7
M06862_2.00 		Arabidopsis thaliana
NYWACTTTWTB
VAWAAAGTWRN		 Dap-seq
OMalley et al.(2016)
At4g38000_colamp_a 		0.542 0.542
DOF5.8
M06868_2.00 		Arabidopsis thaliana
HHNHHYHHHHYTTTHNCTTTTKNNHHNHW
WDNDDNNMAAAAGNDAAARDDDDRDDNDD		 Dap-seq
OMalley et al.(2016)
AT5G66940_col_a 		0.542 0.542
DOF5.8
M06869_2.00 		Arabidopsis thaliana
NNHNDYWRCTTTTTNNHYHNH
DNDRDNNAAAAAGYWRHNDNN		 Dap-seq
OMalley et al.(2016)
AT5G66940_colamp_a 		0.542 0.542
DOF2.5
M06843_2.00 		Arabidopsis thaliana
DYHMCTTTTTN
NAAAAAGKDRH		 Dap-seq
OMalley et al.(2016)
DAG2_col_a 		0.542 0.542
DOF2.5
M06844_2.00 		Arabidopsis thaliana
HWDYHMCTTTTTN
NAAAAAGKDRHWD		 Dap-seq
OMalley et al.(2016)
DAG2_colamp_a 		0.542 0.542
DOF3.4
M06851_2.00 		Arabidopsis thaliana
NNNHYHYHHHWYYHNCTTTWB
VWAAAGNDRRWDDDRDRDNNN		 Dap-seq
OMalley et al.(2016)
OBP1_col_a 		0.542 0.542
DOF5.4
M06865_2.00 		Arabidopsis thaliana
DNWNYHMCTTTTTN
NAAAAAGKDRNWNH		 Dap-seq
OMalley et al.(2016)
OBP4_col_a 		0.542 0.542
DOF5.4
M06866_2.00 		Arabidopsis thaliana
HWDYHVCTTTTTNNNHHNH
DNDDNNNAAAAAGBDRHWD		 Dap-seq
OMalley et al.(2016)
OBP4_colamp_a 		0.542 0.542
DOF2.4
M01940_2.00 		Arabidopsis thaliana
NCKTTWN
NWAAMGN		 PBM
Weirauch et al.(2014)
pTH7912 		0.521 0.521
e_gw1.170.52.1
M01952_2.00 		Physcomitrella patens
NNNCTTTHNN
NNDAAAGNNN		 PBM
Weirauch et al.(2014)
pTH8464 		0.521 0.521
e_gw1.392.16.1
M01953_2.00 		Physcomitrella patens
NNCTTTWNN
NNWAAAGNN		 PBM
Weirauch et al.(2014)
pTH8686 		0.521 0.521
gw1.12.257.1
M01955_2.00 		Physcomitrella patens
NNDDNNN
NNNHHNN		 PBM
Weirauch et al.(2014)
pTH8651 		0.521 0.521
gw1.385.26.1
M01956_2.00 		Physcomitrella patens
NNNCKTTWNN
NNWAAMGNNN		 PBM
Weirauch et al.(2014)
pTH8458 		0.521 0.521
PK01144.1
M01213_2.00 		Cannabis sativa
NCTTTWN
NWAAAGN		 PBM
Lambert et al.(2019)
pTH10160 		0.521 0.521
PK03929.1
M01214_2.00 		Cannabis sativa
NNNCTTTWNN
NNWAAAGNNN		 PBM
Lambert et al.(2019)
pTH10165 		0.521 0.521
PK05671.1
M01215_2.00 		Cannabis sativa
NCDWWNNN
NNNWWHGN		 PBM
Lambert et al.(2019)
pTH10101 		0.521 0.521
PK16340.1
M01220_2.00 		Cannabis sativa
CKTTWNN
NNWAAMG		 PBM
Lambert et al.(2019)
pTH10129 		0.521 0.521
PK23763.1
M01224_2.00 		Cannabis sativa
NNNCTTTWN
NWAAAGNNN		 PBM
Lambert et al.(2019)
pTH10194 		0.521 0.521
CDF5
M06837_2.00 		Arabidopsis thaliana
HHWKYDCTTTTHHYTTTHYHYYWHNHH
DDNDWRRDRDAAARDDAAAAGHRMWDD		 Dap-seq
OMalley et al.(2016)
AT1G69570_col_a 		0.521 0.521
CDF5
M06838_2.00 		Arabidopsis thaliana
YVCTTTTNNYTTWHHHBHBNN
NNVDVDDDWAARNNAAAAGBR		 Dap-seq
OMalley et al.(2016)
AT1G69570_colamp_a 		0.521 0.521
DOF2.2
M06839_2.00 		Arabidopsis thaliana
HHHYHHHHYWTYHNCTTTTTN
NAAAAAGNDRAWRDDDDRDDD		 Dap-seq
OMalley et al.(2016)
AT2G28810_col_a 		0.521 0.521
DOF2.2
M06840_2.00 		Arabidopsis thaliana
NYHNCTTTWTNNNHH
DDNNNAWAAAGNDRN		 Dap-seq
OMalley et al.(2016)
AT2G28810_colamp_a 		0.521 0.521
DOF5.1
M06863_2.00 		Arabidopsis thaliana
HYHYWYHHHYTTWNCTTTTTN
NAAAAAGNWAARDDDRWRDRD		 Dap-seq
OMalley et al.(2016)
AT5G02460_col_a 		0.521 0.521
DOF5.1
M06864_2.00 		Arabidopsis thaliana
NHDYHRCTTTWTNNHNNHN
NDNNDNNAWAAAGYDRHDN		 Dap-seq
OMalley et al.(2016)
AT5G02460_colamp_a 		0.521 0.521
DOF2.4
M06841_2.00 		Arabidopsis thaliana
HHWWTTHMCTTTTTN
NAAAAAGKDAAWWDD		 Dap-seq
OMalley et al.(2016)
dof24_col_a 		0.521 0.521
DOF2.4
M06842_2.00 		Arabidopsis thaliana
HHMCTTTWTNNNNHN
NDNNNNAWAAAGKDD		 Dap-seq
OMalley et al.(2016)
dof24_colamp_a 		0.521 0.521
DOF4.2
M06856_2.00 		Arabidopsis thaliana
NNHWWWRCCTTTTTNNHNH
DNDNNAAAAAGGYWWWDNN		 Dap-seq
OMalley et al.(2016)
dof42_col_a 		0.521 0.521
DOF4.3
M06857_2.00 		Arabidopsis thaliana
AAAGNYRCTTT
AAAGYRNCTTT		 Dap-seq
OMalley et al.(2016)
dof43_col_a 		0.521 0.521
DOF4.3
M06858_2.00 		Arabidopsis thaliana
NWAAAGHRVCTTTW
WAAAGBYDCTTTWN		 Dap-seq
OMalley et al.(2016)
dof43_colamp_a 		0.521 0.521
OBP3
M06854_2.00 		Arabidopsis thaliana
BTHWCTTTTYNHYTTYWYYHH
DDRRWRAARDNRAAAAGWDAV		 Dap-seq
OMalley et al.(2016)
OBP3_col_a 		0.521 0.521
OBP3
M06855_2.00 		Arabidopsis thaliana
NHNWHNHHNYWNCTTTTYN
NRAAAAGNWRNDDNDWNDN		 Dap-seq
OMalley et al.(2016)
OBP3_colamp_a 		0.521 0.521
Dof3
M02676_2.00 		Zea mays
BRCTTT
AAAGYV		 SELEX
Mathelier et al.(2014)
MA0021.1 		0.521 0.521
Dof3
M10439_2.00 		Zea mays
NBNCTTTNNBN
NVNNAAAGNVN		 Transfac
Matys et al.(2006)
P$DOF3_01 		0.521 0.521
For this family, TFs with SR scores > 0.508 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ11189 Dof 12 59

Links

Other Dof family TFs
Other Selaginella moellendorffii TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SELMODRAFT_19633 Selaginella moellendorffii SELMODRAFT_19633 I 0.979
SELMODRAFT_19631 Selaginella moellendorffii SELMODRAFT_19631 I 0.917
GRMZM2G144188 Zea mays GRMZM2G144188 I 0.607
TCM_029918 Theobroma cacao TCM_029918 I 0.604
Traes_1DL_56A46D571 Triticum aestivum Traes_1DL_56A46D571 I 0.593
LjSGA_111604.1.1 Lotus japonicus LjSGA_111604.1.1 I 0.593
MLOC_65231 Hordeum vulgare MLOC_65231 I 0.588
Pavir.Ba01771 Panicum virgatum Pavir.Ba01771 I 0.583
GSMUA_Achr8G02600_001 Musa acuminata GSMUA_Achr8G02600_001 I 0.583
MLOC_73724 Hordeum vulgare MLOC_73724 I 0.583
Traes_6AL_065306054 Triticum aestivum Traes_6AL_065306054 I 0.583
Sb03g003050 Sorghum bicolor Sb03g003050 I 0.583
Traes_6DL_EF6D5D4FA Triticum aestivum Traes_6DL_EF6D5D4FA I 0.583
GLYMA04G41830 Glycine max GLYMA04G41830 I 0.583
GLYMA06G12950 Glycine max GLYMA06G12950 I 0.583
OGLUM01G30020 Oryza glumaepatula OGLUM01G30020 I 0.577
Traes_1BL_0DFC787A9 Triticum aestivum Traes_1BL_0DFC787A9 I 0.565
Traes_5DL_04A93DD74 Triticum aestivum Traes_5DL_04A93DD74 I 0.565
Eucgr.E03261 Eucalyptus grandis Eucgr.E03261 I 0.562
Solyc09g010680.2 Solanum lycopersicum Solyc09g010680.2 I 0.562
Traes_2AL_E93926EE7 Triticum aestivum Traes_2AL_E93926EE7 I 0.556
Bra013496 Brassica rapa Bra013496 I 0.553
OBART10G09450 Oryza barthii OBART10G09450 I 0.552
Traes_5AL_1EA22121D Triticum aestivum Traes_5AL_1EA22121D I 0.550
OS12G0590700 Oryza sativa OS12G0590700 I 0.545
Traes_2BL_4611C1667 Triticum aestivum Traes_2BL_4611C1667 I 0.543
Gorai.009G168300 Gossypium raimondii Gorai.009G168300 I 0.542
Lus10025707.g Linum usitatissimum Lus10025707.g I 0.542
Traes_3AS_1DEBF1E8B Triticum aestivum Traes_3AS_1DEBF1E8B I 0.542
TRIUR3_22971 Triticum urartu TRIUR3_22971 I 0.542
MDP0000241840 Malus domestica MDP0000241840 I 0.542
Lus10035955.g Linum usitatissimum Lus10035955.g I 0.542
Carubv10011378m.g Capsella rubella Carubv10011378m.g I 0.542
Traes_3DS_72524290F Triticum aestivum Traes_3DS_72524290F I 0.542
Cla014311 Citrullus lanatus Cla014311 I 0.542
OS05G0112200 Oryza sativa OS05G0112200 I 0.542
MLOC_79421 Hordeum vulgare MLOC_79421 I 0.542
MTR_2g059540 Medicago truncatula MTR_2g059540 I 0.542
OGLUM05G00930 Oryza glumaepatula OGLUM05G00930 I 0.542
LPERR05G00880 Leersia perrieri LPERR05G00880 I 0.542
GSMUA_Achr10G18770_001 Musa acuminata GSMUA_Achr10G18770_001 I 0.542
BGIOSGA018944 Oryza indica BGIOSGA018944 I 0.542
F775_09091 Aegilops tauschii F775_09091 I 0.542
GLYMA05G02220 Glycine max GLYMA05G02220 I 0.542
ONIVA05G00860 Oryza nivara ONIVA05G00860 I 0.542
OBART05G00910 Oryza barthii OBART05G00910 I 0.542
Gorai.012G103400 Gossypium raimondii Gorai.012G103400 I 0.542
ORGLA05G0009500 Oryza glaberrima ORGLA05G0009500 I 0.542
PGSC0003DMG400023426 Solanum tuberosum PGSC0003DMG400023426 I 0.542
OPUNC05G00830 Oryza punctata OPUNC05G00830 I 0.542
Traes_3AL_3FD608E1A Triticum aestivum Traes_3AL_3FD608E1A I 0.538
OPUNC01G26100 Oryza punctata OPUNC01G26100 I 0.536
SELMODRAFT_9042 Selaginella moellendorffii SELMODRAFT_9042 I 0.532
MLOC_72873 Hordeum vulgare MLOC_72873 I 0.529
OBART02G29600 Oryza barthii OBART02G29600 I 0.523
MLOC_69454 Hordeum vulgare MLOC_69454 I 0.522
SapurV1A.0753s0070 Salix purpurea SapurV1A.0753s0070 I 0.521
Bra028872 Brassica rapa Bra028872 I 0.521
POPTR_0013s06290 Populus trichocarpa POPTR_0013s06290 I 0.521
AMTR_s00036p00232310 Amborella trichopoda AMTR_s00036p00232310 I 0.521
Bostr.10689s0053 Boechera stricta Bostr.10689s0053 I 0.521
AMTR_s00021p00057700 Amborella trichopoda AMTR_s00021p00057700 I 0.521
GRMZM2G131897 Zea mays GRMZM2G131897 I 0.521
GLYMA15G08860 Glycine max GLYMA15G08860 I 0.521
SELMODRAFT_410014 Selaginella moellendorffii SELMODRAFT_410014 I 0.521
ORUFI03G27150 Oryza rufipogon ORUFI03G27150 I 0.519
POPTR_0011s04730 Populus trichocarpa POPTR_0011s04730 I 0.517
29851.m002375 Ricinus communis 29851.m002375 I 0.517
POPTR_0002s13100 Populus trichocarpa POPTR_0002s13100 I 0.508
GLYMA15G04980 Glycine max GLYMA15G04980 I 0.508
VIT_00s0652g00010 Vitis vinifera VIT_00s0652g00010 I 0.508
Gorai.010G152100 Gossypium raimondii Gorai.010G152100 I 0.508
mgf021408m Mimulus guttatus mgf021408m I 0.508
Gorai.001G129500 Gossypium raimondii Gorai.001G129500 I 0.508