CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SELMODRAFT_406467
(
Selaginella moellendorffii
)
Dof
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02701 (zf-Dof)
IPR003851
SELMODRAFT_406467
T171127_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Dof2
M02674_2.00
Zea mays
NGCTTT
AAAGCN
SELEX
Mathelier et al.(2014)
MA0020.1
0.537
0.537
Dof2
M10436_2.00
Zea mays
NNDCTTTWNND
HNNWAAAGHNN
Transfac
Matys et al.(2006)
P$DOF2_01
0.537
0.537
Dof2
M10437_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DOF_Q2
0.537
0.537
For this family, TFs with SR scores >
0.508
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ33723
Dof
298
354
GVYPCPRCGSYKTRFDHYNNRDGGNFKYGNKKSPMFACKNGCGKRFKVTNRYWEKYG
Links
Other
Dof
family TFs
Other
Selaginella moellendorffii
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SELMODRAFT_403990
Selaginella moellendorffii
SELMODRAFT_403990
I
1.000
MTR_5g041420
Medicago truncatula
MTR_5g041420
I
0.537
GRMZM2G089850
Zea mays
GRMZM2G089850
I
0.537
Pavir.Db01528
Panicum virgatum
Pavir.Db01528
I
0.512
SELMODRAFT_19643
Selaginella moellendorffii
SELMODRAFT_19643
I
0.512
PGSC0003DMG400021361
Solanum tuberosum
PGSC0003DMG400021361
I
0.512
GLYMA07G35690
Glycine max
GLYMA07G35690
I
0.512
GLYMA02G12081
Glycine max
GLYMA02G12081
I
0.512
SELMODRAFT_19640
Selaginella moellendorffii
SELMODRAFT_19640
I
0.512