SELMODRAFT_417529 (Selaginella moellendorffii)
Dof

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02701 (zf-Dof) IPR003851 SELMODRAFT_417529 T171135_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
e_gw1.170.52.1
M01952_2.00
Physcomitrella patens
NNNCTTTHNN

NNDAAAGNNN
PBM
Weirauch et al.(2014)
pTH8464
0.542 0.542
gw1.12.257.1
M01955_2.00
Physcomitrella patens
NNDDNNN

NNNHHNN
PBM
Weirauch et al.(2014)
pTH8651
0.542 0.542
DOF1.6
M06831_2.00
Arabidopsis thaliana
HYACTTTWNNN

NNNWAAAGTRD
Dap-seq
OMalley et al.(2016)
AT1G47655_col_a
0.525 0.525
DOF1.6
M06832_2.00
Arabidopsis thaliana
YYYTTDNCTTTWYBN

NVRWAAAGNHAARRR
Dap-seq
OMalley et al.(2016)
AT1G47655_colamp_a
0.525 0.525
CDF5
M06837_2.00
Arabidopsis thaliana
HHWKYDCTTTTHHYTTTHYHYYWHNHH

DDNDWRRDRDAAARDDAAAAGHRMWDD
Dap-seq
OMalley et al.(2016)
AT1G69570_col_a
0.508 0.508
CDF5
M06838_2.00
Arabidopsis thaliana
YVCTTTTNNYTTWHHHBHBNN

NNVDVDDDWAARNNAAAAGBR
Dap-seq
OMalley et al.(2016)
AT1G69570_colamp_a
0.508 0.508
For this family, TFs with SR scores > 0.508 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ21141 Dof 52 117

Links

Other Dof family TFs
Other Selaginella moellendorffii TFs

267 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANIA_06788 Aspergillus nidulans CADANIAG00007583 D 0.000
PMAA_101180 Penicillium marneffei PMAA_101180 I 0.000
VHEMI01586 Torrubiella hemipterigena VHEMI01586 I 0.000
PMAA_101180 Talaromyces marneffei PMAA_101180 I 0.000
ACLA_004260 Aspergillus clavatus CADACLAG00000415 N 0.000
ada-6 Neurospora crassa NCU04866 N 0.000
estExt_Genewise1Plus.C_150229 Neurospora discreta estExt_Genewise1Plus.C_150229 N 0.000
TSTA_061430 Talaromyces stipitatus TSTA_061430 N 0.000
THITE_118254 Thielavia terrestris THITE_118254 N 0.000
SMAC_09262 Sordaria macrospora SMAC_09262 N 0.000
PMAA_101850 Talaromyces marneffei PMAA_101850 N 0.000
OIDMADRAFT_136671 Oidiodendron maius OIDMADRAFT_136671 N 0.000
NEUTE1DRAFT_78029 Neurospora tetrasperma NEUTE1DRAFT_78029 N 0.000
MYCTH_2305551 Myceliophthora thermophila MYCTH_2305551 N 0.000
CHGG_05152 Chaetomium globosum CHGG_05152 N 0.000
CADANGAG00007720 Aspergillus niger CADANGAG00007720 N 0.000
PMAA_101850 Penicillium marneffei PMAA_101850 N 0.000