SELMODRAFT_417529 (Selaginella moellendorffii)
Dof

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02701 (zf-Dof) IPR003851 SELMODRAFT_417529 T171135_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
e_gw1.170.52.1
M01952_2.00
Physcomitrella patens
NNNCTTTHNN

NNDAAAGNNN
PBM
Weirauch et al.(2014)
pTH8464
0.542 0.542
gw1.12.257.1
M01955_2.00
Physcomitrella patens
NNDDNNN

NNNHHNN
PBM
Weirauch et al.(2014)
pTH8651
0.542 0.542
DOF1.6
M06831_2.00
Arabidopsis thaliana
HYACTTTWNNN

NNNWAAAGTRD
Dap-seq
OMalley et al.(2016)
AT1G47655_col_a
0.525 0.525
DOF1.6
M06832_2.00
Arabidopsis thaliana
YYYTTDNCTTTWYBN

NVRWAAAGNHAARRR
Dap-seq
OMalley et al.(2016)
AT1G47655_colamp_a
0.525 0.525
CDF5
M06837_2.00
Arabidopsis thaliana
HHWKYDCTTTTHHYTTTHYHYYWHNHH

DDNDWRRDRDAAARDDAAAAGHRMWDD
Dap-seq
OMalley et al.(2016)
AT1G69570_col_a
0.508 0.508
CDF5
M06838_2.00
Arabidopsis thaliana
YVCTTTTNNYTTWHHHBHBNN

NNVDVDDDWAARNNAAAAGBR
Dap-seq
OMalley et al.(2016)
AT1G69570_colamp_a
0.508 0.508
For this family, TFs with SR scores > 0.508 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ21141 Dof 52 117

Links

Other Dof family TFs
Other Selaginella moellendorffii TFs

267 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00033p00212490 Amborella trichopoda AMTR_s00033p00212490 I 0.508
AMTR_s00058p00210070 Amborella trichopoda AMTR_s00058p00210070 I 0.508
AMTR_s00069p00049300 Amborella trichopoda AMTR_s00069p00049300 I 0.542
AMTR_s00160p00046100 Amborella trichopoda AMTR_s00160p00046100 I 0.508
Aquca_007_00464 Aquilegia coerulea Aquca_007_00464 I 0.508
Aquca_027_00116 Aquilegia coerulea Aquca_027_00116 I 0.508
Aquca_010_00309 Aquilegia coerulea Aquca_010_00309 I 0.508
fgenesh1_pm.C_scaffold_6002901 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002901 I 0.508
fgenesh2_kg.1__3864__AT1G47655.1 Arabidopsis lyrata fgenesh2_kg.1__3864__AT1G47655.1 I 0.525
fgenesh2_kg.2__1221__AT1G69570.1 Arabidopsis lyrata fgenesh2_kg.2__1221__AT1G69570.1 I 0.508
fgenesh2_kg.4__821__AT2G28510.1 Arabidopsis lyrata fgenesh2_kg.4__821__AT2G28510.1 I 0.508
DOF1.6 Arabidopsis thaliana AT1G47655 D 0.525
CDF5 Arabidopsis thaliana AT1G69570 D 0.508
DOF2.1 Arabidopsis thaliana AT2G28510 I 0.508
DOF4.1 Arabidopsis thaliana AT4G00940 I 0.508
Bostr.27991s0072 Boechera stricta Bostr.27991s0072 I 0.508
Bostr.15654s0062 Boechera stricta Bostr.15654s0062 I 0.525
Bostr.10273s0408 Boechera stricta Bostr.10273s0408 I 0.508
Bostr.7365s0035 Boechera stricta Bostr.7365s0035 I 0.508
BRADI3G56380 Brachypodium distachyon BRADI3G56380 I 0.508
Bo01304s020 Brassica oleracea Bo01304s020 I 0.508
Bo1g023740 Brassica oleracea Bo1g023740 I 0.508
Bo9g141200 Brassica oleracea Bo9g141200 I 0.508
Bo2g025060 Brassica oleracea Bo2g025060 I 0.508
Bo9g032170 Brassica oleracea Bo9g032170 I 0.508
Bo3g143320 Brassica oleracea Bo3g143320 I 0.525
Bo4g165430 Brassica oleracea Bo4g165430 I 0.508
Bo6g010470 Brassica oleracea Bo6g010470 I 0.525
Bo9g003870 Brassica oleracea Bo9g003870 I 0.508
Bra002504 Brassica rapa Bra002504 I 0.508
Bra013492 Brassica rapa Bra013492 I 0.508
Bra003994 Brassica rapa Bra003994 I 0.508
Bra013493 Brassica rapa Bra013493 I 0.508
Bra035696 Brassica rapa Bra035696 I 0.508
Bra020261 Brassica rapa Bra020261 I 0.508
Bra015609 Brassica rapa Bra015609 I 0.525
Bra027722 Brassica rapa Bra027722 I 0.525
Bra037401 Brassica rapa Bra037401 I 0.508
Bra010884 Brassica rapa Bra010884 I 0.525
PK28796.1 Cannabis sativa PK28796.1 I 0.508
Cagra.0820s0003 Capsella grandiflora Cagra.0820s0003 I 0.508
Cagra.1062s0034 Capsella grandiflora Cagra.1062s0034 I 0.508
Cagra.12068s0002 Capsella grandiflora Cagra.12068s0002 I 0.508
Cagra.13365s0005 Capsella grandiflora Cagra.13365s0005 I 0.525
Cagra.1372s0028 Capsella grandiflora Cagra.1372s0028 I 0.508
Cagra.1427s0001 Capsella grandiflora Cagra.1427s0001 I 0.508
Carubv10023783m.g Capsella rubella Carubv10023783m.g I 0.508
Carubv10006458m.g Capsella rubella Carubv10006458m.g I 0.508
Carubv10010283m.g Capsella rubella Carubv10010283m.g I 0.525
Carubv10020399m.g Capsella rubella Carubv10020399m.g I 0.508
Carubv10020454m.g Capsella rubella Carubv10020454m.g I 0.508
Carubv10001609m.g Capsella rubella Carubv10001609m.g I 0.508
evm.TU.supercontig_3.115 Carica papaya evm.TU.supercontig_3.115 I 0.508
evm.TU.supercontig_318.1 Carica papaya evm.TU.supercontig_318.1 I 0.508
gw1.4.467.1 Chlorella NC64A gw1.4.467.1 I 0.537
Ca_14610 Cicer arietinum Ca_14610 I 0.508
Ca_19648 Cicer arietinum Ca_19648 I 0.525
Ca_00318 Cicer arietinum Ca_00318 I 0.525
Ca_02510 Cicer arietinum Ca_02510 I 0.508
Ca_00295 Cicer arietinum Ca_00295 I 0.508
Cla000551 Citrullus lanatus Cla000551 I 0.508
Cla001393 Citrullus lanatus Cla001393 I 0.517
Cla005140 Citrullus lanatus Cla005140 I 0.525
Cla006816 Citrullus lanatus Cla006816 I 0.508
Cla009786 Citrullus lanatus Cla009786 I 0.508
Cla020008 Citrullus lanatus Cla020008 I 0.508
Cla004342 Citrullus lanatus Cla004342 I 0.508
Ciclev10015879m.g Citrus clementina Ciclev10015879m.g I 0.508
Ciclev10028912m.g Citrus clementina Ciclev10028912m.g I 0.508
orange1.1g042156m.g Citrus sinensis orange1.1g042156m.g I 0.508
orange1.1g021974m.g Citrus sinensis orange1.1g021974m.g I 0.508
Cucsa.032330 Cucumis sativus Cucsa.032330 I 0.508
Cucsa.052650 Cucumis sativus Cucsa.052650 I 0.508
Cucsa.126800 Cucumis sativus Cucsa.126800 I 0.508
Cucsa.349890 Cucumis sativus Cucsa.349890 I 0.508
Cucsa.207460 Cucumis sativus Cucsa.207460 I 0.525
Cucsa.046040 Cucumis sativus Cucsa.046040 I 0.517
Eucgr.K00405 Eucalyptus grandis Eucgr.K00405 I 0.508
Thhalv10011762m.g Eutrema salsugineum Thhalv10011762m.g I 0.542
Thhalv10010640m.g Eutrema salsugineum Thhalv10010640m.g I 0.508
Thhalv10000425m.g Eutrema salsugineum Thhalv10000425m.g I 0.508
Thhalv10018679m.g Eutrema salsugineum Thhalv10018679m.g I 0.508
Thhalv10017032m.g Eutrema salsugineum Thhalv10017032m.g I 0.508
Thhalv10029492m.g Eutrema salsugineum Thhalv10029492m.g I 0.508
gene02365-v1.0-hybrid Fragaria vesca gene02365-v1.0-hybrid I 0.508
gene12818-v1.0-hybrid Fragaria vesca gene12818-v1.0-hybrid I 0.508
gene30428-v1.0-hybrid Fragaria vesca gene30428-v1.0-hybrid I 0.508
gene25330-v1.0-hybrid Fragaria vesca gene25330-v1.0-hybrid I 0.525
gene20567-v1.0-hybrid Fragaria vesca gene20567-v1.0-hybrid I 0.508
GLYMA15G04980 Glycine max GLYMA15G04980 I 0.508
GLYMA13G40420 Glycine max GLYMA13G40420 I 0.508
GLYMA15G07730 Glycine max GLYMA15G07730 I 0.508
GLYMA13G31560 Glycine max GLYMA13G31560 I 0.508
GLYMA13G31110 Glycine max GLYMA13G31110 I 0.508
GLYMA13G25120 Glycine max GLYMA13G25120 I 0.517
GLYMA12G07710 Glycine max GLYMA12G07710 I 0.508
GLYMA11G15761 Glycine max GLYMA11G15761 I 0.508
GLYMA07G31340 Glycine max GLYMA07G31340 I 0.517
GLYMA06G13671 Glycine max GLYMA06G13671 I 0.508
GLYMA04G41170 Glycine max GLYMA04G41170 I 0.508
GLYMA19G38660 Glycine max GLYMA19G38660 I 0.508
GLYMA19G38750 Glycine max GLYMA19G38750 I 0.508
GLYMA15G08230 Glycine max GLYMA15G08230 I 0.508
Gorai.001G129500 Gossypium raimondii Gorai.001G129500 I 0.508
Gorai.004G122800 Gossypium raimondii Gorai.004G122800 I 0.508
Gorai.009G079400 Gossypium raimondii Gorai.009G079400 I 0.508
Gorai.009G168300 Gossypium raimondii Gorai.009G168300 I 0.508
Gorai.009G168400 Gossypium raimondii Gorai.009G168400 I 0.508
Gorai.011G029200 Gossypium raimondii Gorai.011G029200 I 0.508
Gorai.011G104200 Gossypium raimondii Gorai.011G104200 I 0.508
MLOC_72949 Hordeum vulgare MLOC_72949 I 0.526
MLOC_72873 Hordeum vulgare MLOC_72873 I 0.510
LPERR10G10860 Leersia perrieri LPERR10G10860 I 0.508
Lus10007774.g Linum usitatissimum Lus10007774.g I 0.525
Lus10010113.g Linum usitatissimum Lus10010113.g I 0.508
Lus10012619.g Linum usitatissimum Lus10012619.g I 0.508
Lus10028611.g Linum usitatissimum Lus10028611.g I 0.508
Lus10022373.g Linum usitatissimum Lus10022373.g I 0.508
LjSGA_085650.1 Lotus japonicus LjSGA_085650.1 I 0.508
LjSGA_037282.1 Lotus japonicus LjSGA_037282.1 I 0.508
LjSGA_023870.1 Lotus japonicus LjSGA_023870.1 I 0.508
chr6.CM0114.290.nc Lotus japonicus chr6.CM0114.290.nc I 0.508
LjSGA_132897.1 Lotus japonicus LjSGA_132897.1 I 0.509
MDP0000282021 Malus domestica MDP0000282021 I 0.525
MDP0000553864 Malus domestica MDP0000553864 I 0.508
MDP0000611302 Malus domestica MDP0000611302 I 0.508
MDP0000808238 Malus domestica MDP0000808238 I 0.517
MDP0000866809 Malus domestica MDP0000866809 I 0.508
MDP0000188242 Malus domestica MDP0000188242 I 0.525
MDP0000547254 Malus domestica MDP0000547254 I 0.508
MDP0000925497 Malus domestica MDP0000925497 I 0.517
MDP0000315002 Malus domestica MDP0000315002 I 0.525
MDP0000271624 Malus domestica MDP0000271624 I 0.525
MDP0000429215 Malus domestica MDP0000429215 I 0.525
cassava20128.m1 Manihot esculenta cassava20128.m1 I 0.508
cassava3570.m1 Manihot esculenta cassava3570.m1 I 0.508
cassava36233.valid.m1 Manihot esculenta cassava36233.valid.m1 I 0.508
cassava42841.valid.m1 Manihot esculenta cassava42841.valid.m1 I 0.508
cassava45583.m1 Manihot esculenta cassava45583.m1 I 0.508
cassava15550.m1 Manihot esculenta cassava15550.m1 I 0.508
MTR_2g013370 Medicago truncatula MTR_2g013370 I 0.517
MTR_2g093220 Medicago truncatula MTR_2g093220 I 0.508
MTR_3g091820 Medicago truncatula MTR_3g091820 I 0.508
MTR_4g089095 Medicago truncatula MTR_4g089095 I 0.517
MTR_4g461080 Medicago truncatula MTR_4g461080 I 0.508
mgf010674m Mimulus guttatus mgf010674m I 0.508
mgf026075m Mimulus guttatus mgf026075m I 0.508
mgf026037m Mimulus guttatus mgf026037m I 0.508
mgf012457m Mimulus guttatus mgf012457m I 0.508
mgf012900m Mimulus guttatus mgf012900m I 0.508
mgf015387m Mimulus guttatus mgf015387m I 0.542
mgf020971m Mimulus guttatus mgf020971m I 0.508
GSMUA_Achr10G03030_001 Musa acuminata GSMUA_Achr10G03030_001 I 0.508
GSMUA_Achr10G05890_001 Musa acuminata GSMUA_Achr10G05890_001 I 0.508
GSMUA_Achr11G10790_001 Musa acuminata GSMUA_Achr11G10790_001 I 0.508
GSMUA_Achr11G23850_001 Musa acuminata GSMUA_Achr11G23850_001 I 0.525
GSMUA_Achr4G27160_001 Musa acuminata GSMUA_Achr4G27160_001 I 0.525
GSMUA_Achr11G21760_001 Musa acuminata GSMUA_Achr11G21760_001 I 0.525
GSMUA_Achr4G30470_001 Musa acuminata GSMUA_Achr4G30470_001 I 0.508
GSMUA_Achr9G25010_001 Musa acuminata GSMUA_Achr9G25010_001 I 0.508
OBART02G10830 Oryza barthii OBART02G10830 I 0.508
OBART10G14440 Oryza barthii OBART10G14440 I 0.517
ORGLA02G0097900 Oryza glaberrima ORGLA02G0097900 I 0.508
OGLUM10G14340 Oryza glumaepatula OGLUM10G14340 I 0.517
OGLUM02G10780 Oryza glumaepatula OGLUM02G10780 I 0.508
BGIOSGA006773 Oryza indica BGIOSGA006773 I 0.508
BGIOSGA031626 Oryza indica BGIOSGA031626 I 0.517
BGIOSGA031618 Oryza indica BGIOSGA031618 I 0.517
ONIVA10G16300 Oryza nivara ONIVA10G16300 I 0.517
ONIVA02G12020 Oryza nivara ONIVA02G12020 I 0.508
OPUNC10G12930 Oryza punctata OPUNC10G12930 I 0.517
OPUNC02G09630 Oryza punctata OPUNC02G09630 I 0.508
ORUFI10G15400 Oryza rufipogon ORUFI10G15400 I 0.517
OS02G0252400 Oryza sativa OS02G0252400 I 0.508
OS10G0496000 Oryza sativa OS10G0496000 I 0.517
OS12G0590700 Oryza sativa OS12G0590700 I 0.545
Pavir.Ga00239 Panicum virgatum Pavir.Ga00239 I 0.508
Pavir.J16630 Panicum virgatum Pavir.J16630 I 0.508
Pavir.J13869 Panicum virgatum Pavir.J13869 I 0.508
Pavir.J05377 Panicum virgatum Pavir.J05377 I 0.508
Pavir.Ia01590 Panicum virgatum Pavir.Ia01590 I 0.526
gw1.12.257.1 Physcomitrella patens gw1.12.257.1 D 0.542
gw1.69.138.1 Physcomitrella patens gw1.69.138.1 I 0.517
gw1.341.75.1 Physcomitrella patens gw1.341.75.1 I 0.545
estExt_fgenesh1_pg.C_1240078 Physcomitrella patens estExt_fgenesh1_pg.C_1240078 I 0.508
fgenesh1_pg.scaffold_169000096 Physcomitrella patens fgenesh1_pg.scaffold_169000096 I 0.508
estExt_fgenesh1_pg.C_1990054 Physcomitrella patens estExt_fgenesh1_pg.C_1990054 I 0.508
e_gw1.170.52.1 Physcomitrella patens e_gw1.170.52.1 D 0.542
POPTR_0012s02570 Populus trichocarpa POPTR_0012s02570 I 0.508
POPTR_0004s04590 Populus trichocarpa POPTR_0004s04590 I 0.508
Pm005741 Prunus mume Pm005741 I 0.508
Pm010073 Prunus mume Pm010073 I 0.508
Pm009975 Prunus mume Pm009975 I 0.508
PRUPE_ppa018188mg Prunus persica PRUPE_ppa018188mg I 0.508
PRUPE_ppa008939mg Prunus persica PRUPE_ppa008939mg I 0.508
PRUPE_ppa020903mg Prunus persica PRUPE_ppa020903mg I 0.508
29688.m000255 Ricinus communis 29688.m000255 I 0.508
30098.m001709 Ricinus communis 30098.m001709 I 0.508
30190.m011334 Ricinus communis 30190.m011334 I 0.508
29851.m002375 Ricinus communis 29851.m002375 I 0.508
SapurV1A.0498s0050 Salix purpurea SapurV1A.0498s0050 I 0.508
SapurV1A.0250s0210 Salix purpurea SapurV1A.0250s0210 I 0.508
SELMODRAFT_409864 Selaginella moellendorffii SELMODRAFT_409864 I 1.000
SELMODRAFT_19636 Selaginella moellendorffii SELMODRAFT_19636 I 0.981
SELMODRAFT_19643 Selaginella moellendorffii SELMODRAFT_19643 I 0.915
SELMODRAFT_19637 Selaginella moellendorffii SELMODRAFT_19637 I 0.981
SELMODRAFT_19640 Selaginella moellendorffii SELMODRAFT_19640 I 0.915
SELMODRAFT_28956 Selaginella moellendorffii SELMODRAFT_28956 I 0.915
SELMODRAFT_425609 Selaginella moellendorffii SELMODRAFT_425609 I 1.000
SELMODRAFT_28959 Selaginella moellendorffii SELMODRAFT_28959 I 0.898
SELMODRAFT_29096 Selaginella moellendorffii SELMODRAFT_29096 I 0.965
SELMODRAFT_29097 Selaginella moellendorffii SELMODRAFT_29097 I 0.947
SELMODRAFT_29099 Selaginella moellendorffii SELMODRAFT_29099 I 0.965
SELMODRAFT_29567 Selaginella moellendorffii SELMODRAFT_29567 I 0.782
SELMODRAFT_425596 Selaginella moellendorffii SELMODRAFT_425596 I 0.897
SELMODRAFT_410014 Selaginella moellendorffii SELMODRAFT_410014 I 0.983
SELMODRAFT_414369 Selaginella moellendorffii SELMODRAFT_414369 I 1.000
SELMODRAFT_418000 Selaginella moellendorffii SELMODRAFT_418000 N 0.661
SELMODRAFT_419294 Selaginella moellendorffii SELMODRAFT_419294 I 1.000
SELMODRAFT_19633 Selaginella moellendorffii SELMODRAFT_19633 I 0.542
SELMODRAFT_19630 Selaginella moellendorffii SELMODRAFT_19630 I 0.509
SELMODRAFT_429122 Selaginella moellendorffii SELMODRAFT_429122 I 0.983
SELMODRAFT_429125 Selaginella moellendorffii SELMODRAFT_429125 I 1.000
SELMODRAFT_430854 Selaginella moellendorffii SELMODRAFT_430854 I 0.966
SELMODRAFT_439283 Selaginella moellendorffii SELMODRAFT_439283 I 0.525
SELMODRAFT_9042 Selaginella moellendorffii SELMODRAFT_9042 I 0.780
SELMODRAFT_419297 Selaginella moellendorffii SELMODRAFT_419297 I 1.000
SELMODRAFT_19628 Selaginella moellendorffii SELMODRAFT_19628 I 0.508
SELMODRAFT_19629 Selaginella moellendorffii SELMODRAFT_19629 I 0.509
SELMODRAFT_425594 Selaginella moellendorffii SELMODRAFT_425594 I 0.983
Si026626m.g Setaria italica Si026626m.g I 0.508
Si026678m.g Setaria italica Si026678m.g I 0.508
Si019139m.g Setaria italica Si019139m.g I 0.508
Si026692m.g Setaria italica Si026692m.g I 0.508
Si027437m.g Setaria italica Si027437m.g I 0.508
Si040117m.g Setaria italica Si040117m.g I 0.547
Si023256m.g Setaria italica Si023256m.g I 0.508
Solyc02g077960.1 Solanum lycopersicum Solyc02g077960.1 I 0.508
Solyc02g065290.1 Solanum lycopersicum Solyc02g065290.1 I 0.508
Solyc06g075370.2 Solanum lycopersicum Solyc06g075370.2 I 0.508
Solyc04g079570.1 Solanum lycopersicum Solyc04g079570.1 I 0.508
Solyc06g005130.2 Solanum lycopersicum Solyc06g005130.2 I 0.525
Solyc08g082910.1 Solanum lycopersicum Solyc08g082910.1 I 0.508
Solyc10g009360.2 Solanum lycopersicum Solyc10g009360.2 I 0.508
Solyc01g096120.2 Solanum lycopersicum Solyc01g096120.2 I 0.508
PGSC0003DMG400029191 Solanum tuberosum PGSC0003DMG400029191 I 0.525
PGSC0003DMG400000120 Solanum tuberosum PGSC0003DMG400000120 I 0.508
PGSC0003DMG400007506 Solanum tuberosum PGSC0003DMG400007506 I 0.508
PGSC0003DMG400011680 Solanum tuberosum PGSC0003DMG400011680 I 0.508
PGSC0003DMG400012249 Solanum tuberosum PGSC0003DMG400012249 I 0.508
PGSC0003DMG400012825 Solanum tuberosum PGSC0003DMG400012825 I 0.508
PGSC0003DMG400013105 Solanum tuberosum PGSC0003DMG400013105 I 0.508
PGSC0003DMG400018886 Solanum tuberosum PGSC0003DMG400018886 I 0.508
PGSC0003DMG400025372 Solanum tuberosum PGSC0003DMG400025372 I 0.508
PGSC0003DMG400029708 Solanum tuberosum PGSC0003DMG400029708 I 0.508
Sb01g018240 Sorghum bicolor Sb01g018240 I 0.517
Sb04g029300 Sorghum bicolor Sb04g029300 I 0.508
TCM_015456 Theobroma cacao TCM_015456 I 0.508
TCM_041105 Theobroma cacao TCM_041105 I 0.508
TCM_029836 Theobroma cacao TCM_029836 I 0.508
Traes_1DL_56A46D571 Triticum aestivum Traes_1DL_56A46D571 I 0.519
VIT_10s0003g00030 Vitis vinifera VIT_10s0003g00030 I 0.508
VIT_15s0046g00150 Vitis vinifera VIT_15s0046g00150 I 0.508
VIT_00s0218g00040 Vitis vinifera VIT_00s0218g00040 I 0.508
VIT_16s0098g01420 Vitis vinifera VIT_16s0098g01420 I 0.508
VIT_06s0004g03420 Vitis vinifera VIT_06s0004g03420 I 0.508
GRMZM2G137502 Zea mays GRMZM2G137502 I 0.508