CBG00680 (Caenorhabditis briggsae)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 CBG00680 T172364_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
E2F7
M02960_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Jolma et al.(2013)
E2F7_1
0.444 0.444
E2F8
M02959_2.00
Homo sapiens
TTTGGCGGGAAA

TTTCCCGCCAAA
SELEX
Jolma et al.(2013)
E2F8_1
0.444 0.444
E2F7
M04705_2.00
Homo sapiens
WTTTGGCGGGAAAN

NTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX
0.444 0.444
E2F8
M04703_2.00
Homo sapiens
WDKTGGCGGGARNN

NNYTCCCGCCAMHW
SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX
0.444 0.444
E2F7
M09033_2.00
Homo sapiens
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B
0.444 0.444
E2f7
M09040_2.00
Mus musculus
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C
0.444 0.444
E2F7
M09522_2.00
Homo sapiens
NSGCGSGAAMNN

NNKTTCSCGCSN
Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673
0.444 0.444
E2F7
M04706_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX
0.444 0.444
E2F8
M04704_2.00
Homo sapiens
WTTTGGCGGGAAWN

NWTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX
0.444 0.444
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG00680 E2F 99 167
CBG00680 E2F 254 336

Links

Other E2F family TFs
Other Caenorhabditis briggsae TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_102_00001 Aquilegia coerulea Aquca_102_00001 N 0.000
Aquca_039_00001 Aquilegia coerulea Aquca_039_00001 N 0.000
Bostr.10273s0360 Boechera stricta Bostr.10273s0360 N 0.000
Bo6g110620 Brassica oleracea Bo6g110620 N 0.000
PK13949.1 Cannabis sativa PK13949.1 N 0.000
Cagra.10840s0006 Capsella grandiflora Cagra.10840s0006 N 0.000
Carubv10022346m.g Capsella rubella Carubv10022346m.g N 0.000
Cucsa.185330 Cucumis sativus Cucsa.185330 N 0.000
Eucgr.K01194 Eucalyptus grandis Eucgr.K01194 N 0.000
Thhalv10018229m.g Eutrema salsugineum Thhalv10018229m.g N 0.000
gene24495-v1.0-hybrid Fragaria vesca gene24495-v1.0-hybrid N 0.000
GLYMA18G12556 Glycine max GLYMA18G12556 N 0.000
GLYMA08G42321 Glycine max GLYMA08G42321 N 0.000
Gorai.012G042700 Gossypium raimondii Gorai.012G042700 N 0.000
cassava21091.m1 Manihot esculenta cassava21091.m1 N 0.000
mgf000829m Mimulus guttatus mgf000829m N 0.000
Pm014562 Prunus mume Pm014562 N 0.000
PRUPE_ppa002590mg Prunus persica PRUPE_ppa002590mg N 0.000
Solyc10g007810.2 Solanum lycopersicum Solyc10g007810.2 N 0.000
PGSC0003DMG400021240 Solanum tuberosum PGSC0003DMG400021240 N 0.000
TCM_001836 Theobroma cacao TCM_001836 N 0.000
VIT_12s0142g00390 Vitis vinifera VIT_12s0142g00390 N 0.000