CBN23380 (Caenorhabditis brenneri)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 CBN23380 T172368_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
E2F7
M02960_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Jolma et al.(2013)
E2F7_1
0.444 0.444
E2F8
M02959_2.00
Homo sapiens
TTTGGCGGGAAA

TTTCCCGCCAAA
SELEX
Jolma et al.(2013)
E2F8_1
0.444 0.444
E2F7
M04705_2.00
Homo sapiens
WTTTGGCGGGAAAN

NTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX
0.444 0.444
E2F8
M04703_2.00
Homo sapiens
WDKTGGCGGGARNN

NNYTCCCGCCAMHW
SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX
0.444 0.444
E2F7
M09033_2.00
Homo sapiens
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B
0.444 0.444
E2f7
M09040_2.00
Mus musculus
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C
0.444 0.444
E2F7
M09522_2.00
Homo sapiens
NSGCGSGAAMNN

NNKTTCSCGCSN
Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673
0.444 0.444
E2F7
M04706_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX
0.444 0.444
E2F8
M04704_2.00
Homo sapiens
WTTTGGCGGGAAWN

NWTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX
0.444 0.444
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN23380 E2F 98 166
CBN23380 E2F 253 335

Links

Other E2F family TFs
Other Caenorhabditis brenneri TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
E2F8 Homo sapiens ENSG00000129173 D 0.444
E2f7 Mus musculus ENSMUSG00000020185 D 0.444
E2F7 Homo sapiens ENSG00000165891 D 0.444
Cmyd_10016427 Chelonia mydas Cmyd_10016427 I 0.444
SELMODRAFT_451530 Selaginella moellendorffii SELMODRAFT_451530 I 0.430
SELMODRAFT_421405 Selaginella moellendorffii SELMODRAFT_421405 I 0.430
PPA21298 Pristionchus pacificus PPA21298 I 0.778
NV16280 Nasonia vitripennis NV16280 I 0.459
LotgiG168338 Lottia gigantea LotgiG168338 I 0.444
ISCW021939 Ixodes scapularis ISCW021939 I 0.474
HelroG187766 Helobdella robusta HelroG187766 I 0.437
efl-3 Caenorhabditis elegans WBGene00009899 I 0.963
Aan_R005623 Calypte anna Aan_R005623 I 0.444
Aan_R006648 Calypte anna Aan_R006648 I 0.444
Cmyd_10011734 Chelonia mydas Cmyd_10011734 I 0.444
Brh_R011115 Buceros rhinoceros Brh_R011115 I 0.452
Brh_R005316 Buceros rhinoceros Brh_R005316 I 0.444
Afo_R006642 Aptenodytes forsteri Afo_R006642 I 0.444
Alligator_sinensis_CCG013467.1 Alligator sinensis Alligator_sinensis_CCG013467.1 I 0.452
Alligator_sinensis_CCG013028.2 Alligator sinensis Alligator_sinensis_CCG013028.2 I 0.444
Alligator_sinensis_CCG013028.1 Alligator sinensis Alligator_sinensis_CCG013028.1 I 0.444
Afo_R014077 Aptenodytes forsteri Afo_R014077 I 0.444
ENSXMAG00000010237 Xiphophorus maculatus ENSXMAG00000010237 I 0.444
ENSXMAG00000006252 Xiphophorus maculatus ENSXMAG00000006252 I 0.452
ENSSTOG00000008838 Ictidomys tridecemlineatus ENSSTOG00000008838 I 0.437
ENSSTOG00000007887 Ictidomys tridecemlineatus ENSSTOG00000007887 I 0.444
E2F8 Sus scrofa ENSSSCG00000013352 I 0.437
E2F7 Sus scrofa ENSSSCG00000000950 I 0.437
ENSSHAG00000018372 Sarcophilus harrisii ENSSHAG00000018372 I 0.444
ENSSHAG00000002919 Sarcophilus harrisii ENSSHAG00000002919 I 0.444
E2F7 Sorex araneus ENSSARG00000004122 I 0.444
E2f7 Rattus norvegicus ENSRNOG00000026252 I 0.444
E2f8 Rattus norvegicus ENSRNOG00000022537 I 0.437
E2F7 Tupaia belangeri ENSTBEG00000005417 I 0.444
E2F7 Taeniopygia guttata ENSTGUG00000007515 I 0.444
E2F8 Taeniopygia guttata ENSTGUG00000015857 I 0.437
E2F7 Vicugna pacos ENSVPAG00000011151 I 0.444
E2F8 Tursiops truncatus ENSTTRG00000005707 I 0.444
E2F7 Tursiops truncatus ENSTTRG00000000110 I 0.444
ENSTSYG00000008243 Tarsius syrichta ENSTSYG00000008243 I 0.444
ENSTSYG00000007279 Tarsius syrichta ENSTSYG00000007279 I 0.437
e2f8 Takifugu rubripes ENSTRUG00000015792 I 0.452
e2f7 Takifugu rubripes ENSTRUG00000001843 I 0.444
e2f8 Tetraodon nigroviridis ENSTNIG00000009615 I 0.444
e2f7 Tetraodon nigroviridis ENSTNIG00000005126 I 0.434
E2F8 Pteropus vampyrus ENSPVAG00000012522 I 0.437
ENSBTAP00000022518-D1 Bos grunniens ENSBTAP00000022518-D1 I 0.444
TELCIR_03927 Teladorsagia circumcincta TELCIR_03927 I 0.941
L889_g28422 Steinernema feltiae L889_g28422 I 0.748
L596_g12895 Steinernema carpocapsae L596_g12895 I 0.763
HPBE_0000610601 Heligmosomoides bakeri HPBE_0000610601 I 0.889
HCOI01892600 Haemonchus contortus HCOI01892600 I 0.941
TELCIR_22846 Teladorsagia circumcincta TELCIR_22846 I 0.563
DME_0000727201 Dracunculus medinensis DME_0000727201 I 0.526
DICVIV_01764 Dictyocaulus viviparus DICVIV_01764 I 0.933
BXY_1693900 Bursaphelenchus xylophilus BXY_1693900 I 0.726
augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 I 0.630
L892_g1818 Steinernema scapterisci L892_g1818 I 0.748
L893_g19965 Steinernema glaseri L893_g19965 I 0.741
TCNE_0000873901 Toxocara canis TCNE_0000873901 I 0.800
SMUV_0000434101 Syphacia muris SMUV_0000434101 I 0.800
scaffold884-EXSNAP2012.1 Pristionchus exspectatus scaffold884-EXSNAP2012.1 I 0.770
scaffold51-EXSNAP2012.35 Pristionchus exspectatus scaffold51-EXSNAP2012.35 I 0.770
OESDEN_14635 Oesophagostomum dentatum OESDEN_14635 I 0.689
OESDEN_13289 Oesophagostomum dentatum OESDEN_13289 I 0.822
MhA1_Contig130.frz3.gene44 Meloidogyne hapla MhA1_Contig130.frz3.gene44 I 0.719
maker-nMf.1.1.scaf01659-augustus-gene-0.9 Meloidogyne floridensis maker-nMf.1.1.scaf01659-augustus-gene-0.9 I 0.719
L898_g3621 Steinernema monticolum L898_g3621 I 0.719
ASU_04096 Ascaris suum ASU_04096 I 0.763
ASIM_0001001801 Anisakis simplex ASIM_0001001801 I 0.763
Tal_R000495 Tyto alba Tal_R000495 I 0.444
Pvit_10252 Pogona vitticeps Pvit_10252 I 0.452
Pvit_06409 Pogona vitticeps Pvit_06409 I 0.437
Ogr19156 Ophisaurus gracilis Ogr19156 I 0.452
Myotis_brandtii_E2F8_10018668 Myotis brandtii Myotis_brandtii_E2F8_10018668 I 0.437
Myotis_brandtii_E2F7_10034114 Myotis brandtii Myotis_brandtii_E2F7_10034114 I 0.444
Gfo_R003976 Geospiza fortis Gfo_R003976 I 0.452
Gfo_R003950 Geospiza fortis Gfo_R003950 I 0.437
ENSP00000379463 Macaca fascicularis ENSP00000379463 I 0.444
Tal_R008430 Tyto alba Tal_R008430 I 0.444
gw1.8.144.1 Ostreococcus RCC809 gw1.8.144.1 I 0.444
ANCCAN_04600 Ancylostoma caninum ANCCAN_04600 I 0.896
ALUE_0000773501 Ascaris lumbricoides ALUE_0000773501 I 0.763
ACAC_0000024001 Angiostrongylus cantonensis ACAC_0000024001 I 0.889
Minc05731 Meloidogyne incognita Minc05731 I 0.719
Minc04041 Meloidogyne incognita Minc04041 I 0.719
XP_002942881 Xenopus tropicalis XP_002942881 I 0.459
e2f8.L Xenopus laevis XB-GENE-1219153 I 0.459
e2f7.L Xenopus laevis XB-GENE-1018449 I 0.430
Ocbimv22037571m.g Octopus bimaculoides Ocbimv22037571m.g I 0.437
ENSP00000323246 Macaca fascicularis ENSP00000323246 I 0.444
E2F7 Pteropus vampyrus ENSPVAG00000000288 I 0.444
ENSGMOG00000019253 Gadus morhua ENSGMOG00000019253 I 0.459
E2F8 Equus caballus ENSECAG00000016457 I 0.437
ENSDORG00000003404 Dipodomys ordii ENSDORG00000003404 I 0.441
E2f8 Dipodomys ordii ENSDORG00000000040 I 0.430
E2F8 Dasypus novemcinctus ENSDNOG00000003349 I 0.437
E2F7 Dasypus novemcinctus ENSDNOG00000001580 I 0.444
e2f8 Danio rerio ENSDARG00000057323 I 0.444
e2f7 Danio rerio ENSDARG00000008986 I 0.437
ENSCSAG00000005093 Chlorocebus sabaeus ENSCSAG00000005093 I 0.444
ENSCSAG00000003998 Chlorocebus sabaeus ENSCSAG00000003998 I 0.444
ENSECAG00000017963 Equus caballus ENSECAG00000017963 I 0.444
E2F8 Erinaceus europaeus ENSEEUG00000011472 I 0.437
ENSGALG00000010265 Gallus gallus ENSGALG00000010265 I 0.430
ENSGALG00000004023 Gallus gallus ENSGALG00000004023 I 0.444
e2f7 Gasterosteus aculeatus ENSGACG00000019468 I 0.437
e2f8 Gasterosteus aculeatus ENSGACG00000017086 I 0.452
E2F7 Felis catus ENSFCAG00000010756 I 0.444
E2F8 Felis catus ENSFCAG00000010706 I 0.437
ENSFALG00000010433 Ficedula albicollis ENSFALG00000010433 I 0.444
ENSFALG00000001625 Ficedula albicollis ENSFALG00000001625 I 0.444
E2F7 Echinops telfairi ENSETEG00000014750 I 0.444
E2F8 Cavia porcellus ENSCPOG00000013766 I 0.437
E2F7 Cavia porcellus ENSCPOG00000007375 I 0.444
ENSAMEG00000007247 Ailuropoda melanoleuca ENSAMEG00000007247 I 0.444
E2F8 Anolis carolinensis ENSACAG00000015743 I 0.444
E2F7 Anolis carolinensis ENSACAG00000005414 I 0.444
CRE01589 Caenorhabditis remanei CRE01589 I 0.978
CJA26768 Caenorhabditis japonica CJA26768 I 0.956
CGI_10023548 Crassostrea gigas CGI_10023548 I 0.437
CBG00680 Caenorhabditis briggsae CBG00680 I 0.978
CapteG198117 Capitella teleta CapteG198117 I 0.467
BGIBMGA007534 Bombyx mori BGIBMGA007534 I 0.430
ENSAMEG00000017950 Ailuropoda melanoleuca ENSAMEG00000017950 I 0.437
ENSAMXG00000016864 Astyanax mexicanus ENSAMXG00000016864 I 0.444
E2F7 Callithrix jacchus ENSCJAG00000019162 I 0.444
E2F8 Callithrix jacchus ENSCJAG00000006811 I 0.437
ENSCING00000014484 Ciona intestinalis ENSCING00000014484 I 0.437
E2F8 Choloepus hoffmanni ENSCHOG00000006322 I 0.437
E2F8 Canis familiaris ENSCAFG00000009431 I 0.437
E2F7 Canis familiaris ENSCAFG00000005718 I 0.444
E2F7 Bos taurus ENSBTAG00000016931 I 0.444
ENSAPLG00000014506 Anas platyrhynchos ENSAPLG00000014506 I 0.437
ENSAPLG00000009091 Anas platyrhynchos ENSAPLG00000009091 I 0.444
E2F7 Gorilla gorilla ENSGGOG00000012645 I 0.444
E2F7 Pan troglodytes ENSPTRG00000005245 I 0.444
E2F7 Ochotona princeps ENSOPRG00000001896 I 0.437
ENSONIG00000012070 Oreochromis niloticus ENSONIG00000012070 I 0.452
ENSONIG00000007135 Oreochromis niloticus ENSONIG00000007135 I 0.444
E2F7 Otolemur garnettii ENSOGAG00000010821 I 0.444
E2F8 Otolemur garnettii ENSOGAG00000005774 I 0.437
e2f8 Oryzias latipes ENSORLG00000000786 I 0.444
E2F7 Oryctolagus cuniculus ENSOCUG00000004932 I 0.452
E2F8 Oryctolagus cuniculus ENSOCUG00000004485 I 0.437
ENSOARG00000014941 Ovis aries ENSOARG00000014941 I 0.444
ENSORLG00000012301 Oryzias latipes ENSORLG00000012301 I 0.444
ENSPANG00000004929 Papio anubis ENSPANG00000004929 I 0.444
E2F8 Pan troglodytes ENSPTRG00000003435 I 0.444
ENSPSIG00000012629 Pelodiscus sinensis ENSPSIG00000012629 I 0.444
ENSPPYG00000004791 Pongo abelii ENSPPYG00000004791 I 0.444
ENSPPYG00000003424 Pongo abelii ENSPPYG00000003424 I 0.444
ENSPSIG00000008707 Pelodiscus sinensis ENSPSIG00000008707 I 0.452
ENSPMAG00000001858 Petromyzon marinus ENSPMAG00000001858 I 0.459
ENSPFOG00000003272 Poecilia formosa ENSPFOG00000003272 I 0.452
E2F7 Procavia capensis ENSPCAG00000000596 I 0.437
ENSPANG00000005225 Papio anubis ENSPANG00000005225 I 0.444
ENSOARG00000008807 Ovis aries ENSOARG00000008807 I 0.437
E2F8 Ornithorhynchus anatinus ENSOANG00000011290 I 0.444
ENSNLEG00000017803 Nomascus leucogenys ENSNLEG00000017803 I 0.444
E2F7 Myotis lucifugus ENSMLUG00000012116 I 0.444
E2F7 Meleagris gallopavo ENSMGAG00000010943 I 0.430
E2F8 Meleagris gallopavo ENSMGAG00000002303 I 0.437
ENSMEUG00000008461 Macropus eugenii ENSMEUG00000008461 I 0.444
ENSLOCG00000016279 Lepisosteus oculatus ENSLOCG00000016279 I 0.452
ENSLOCG00000004831 Lepisosteus oculatus ENSLOCG00000004831 I 0.452
E2F8 Loxodonta africana ENSLAFG00000022713 I 0.437
E2F7 Loxodonta africana ENSLAFG00000017902 I 0.444
ENSLACG00000016113 Latimeria chalumnae ENSLACG00000016113 I 0.452
E2F8 Myotis lucifugus ENSMLUG00000015592 I 0.437
ENSMPUG00000017468 Mustela putorius furo ENSMPUG00000017468 I 0.444
ENSNLEG00000004897 Nomascus leucogenys ENSNLEG00000004897 I 0.444
E2F8 Macaca mulatta ENSMMUG00000010853 I 0.444
E2F7 Macaca mulatta ENSMMUG00000022846 I 0.444
E2F8 Monodelphis domestica ENSMODG00000009029 I 0.444
E2F7 Monodelphis domestica ENSMODG00000020465 I 0.444
E2f8 Mus musculus ENSMUSG00000046179 I 0.437
ENSMPUG00000013899 Mustela putorius furo ENSMPUG00000013899 I 0.437
Bm4234 Brugia malayi Bm4234 N 0.578
TCLT_0000737401 Thelazia callipaeda TCLT_0000737401 N 0.548
WUBG_01805 Wuchereria bancrofti WUBG_01805 N 0.600
NECAME_17546 Necator americanus NECAME_17546 N 0.504
OFLC_0000212001 Onchocerca flexuosa OFLC_0000212001 N 0.578
LOAG_07147 Loa loa LOAG_07147 N 0.585
WBGene00247952 Onchocerca volvulus WBGene00247952 N 0.585
nOo.2.0.1.g06441 Onchocerca ochengi nOo.2.0.1.g06441 N 0.585
nLs.2.1.2.g03748 Litomosoides sigmodontis nLs.2.1.2.g03748 N 0.570
nDi.2.2.2.g08162 Dirofilaria immitis nDi.2.2.2.g08162 N 0.578
CGOC_0000227901 Cylicostephanus goldi CGOC_0000227901 N 0.815
EVEC_0001263301 Enterobius vermicularis EVEC_0001263301 N 0.615