CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_67050
(
Hordeum vulgare
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
MLOC_67050
T173271_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.38.2.1
M01968_2.00
Physcomitrella patens
NSGCGCBHHN
NDDVGCGCSN
PBM
Weirauch et al.(2014)
pTH5707
0.446
0.446
E2FE
M01958_2.00
Arabidopsis thaliana
HDSGCGCSHD
HDSGCGCSHD
PBM
Weirauch et al.(2014)
pTH8176
0.772
0.772
E2FC
M06870_2.00
Arabidopsis thaliana
AWDDDGGCGCCAAAR
YTTTGGCGCCHHHWT
Dap-seq
OMalley et al.(2016)
E2FC_col_a
0.515
0.515
E2F4
M02961_2.00
Homo sapiens
AATGGCGCCAAA
TTTGGCGCCATT
SELEX
Jolma et al.(2013)
E2F4_1
0.446
0.446
E2FE
M06873_2.00
Arabidopsis thaliana
TTTTGGCGGGAAAWWNWNDDN
NHHNWNWWTTTCCCGCCAAAA
Dap-seq
OMalley et al.(2016)
DEL1_col_a
0.772
0.772
TVAG_062990
M01967_2.00
Trichomonas vaginalis
NNSGCGSBNN
NNVSCGCSNN
PBM
Weirauch et al.(2014)
pTH5727
0.485
0.485
E2F4
M02962_2.00
Homo sapiens
TTTGGCGCCAAA
TTTGGCGCCAAA
SELEX
Jolma et al.(2013)
E2F4_2
0.446
0.446
E2FE
M06874_2.00
Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH
Dap-seq
OMalley et al.(2016)
DEL1_colamp_a
0.772
0.772
E2FD
M06875_2.00
Arabidopsis thaliana
DWWHDDTTTTGGCGGGAAAW
WTTTCCCGCCAAAAHHDWWH
Dap-seq
OMalley et al.(2016)
DEL2_col_a
0.640
0.640
estExt_gwp_gw1.C_220046
M01225_2.00
Physcomitrella patens
VGCGCBHHNN
NNDDVGCGCB
PBM
Lambert et al.(2019)
pTH9809
0.485
0.485
E2F4
M04707_2.00
Homo sapiens
NWWKGGCGCCAAAW
WTTTGGCGCCMWWN
SELEX
Yin et al.(2017)
E2F4_eDBD_HT-SELEX
0.446
0.446
E2FD
M06876_2.00
Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH
Dap-seq
OMalley et al.(2016)
DEL2_colamp_a
0.640
0.640
E2F1
M02952_2.00
Homo sapiens
WWDGGCGCCAAW
WTTGGCGCCHWW
SELEX
Jolma et al.(2013)
E2F1_1
0.455
0.455
E2F4
M08109_2.00
Homo sapiens
NSGCGGGARVN
NBYTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA0470.1
0.446
0.446
E2FD
M10442_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$E2L1_Q2
0.640
0.640
E2F1
M02953_2.00
Homo sapiens
WWKGGCGCCWWW
WWWGGCGCCMWW
SELEX
Jolma et al.(2013)
E2F1_2
0.455
0.455
E2F4
M07942_2.00
Homo sapiens
SGCGSGARDNNBNVN
NBNVNNHYTCSCGCS
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F4_UCD
0.446
0.446
E2FD
M10443_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$E2L_Q2
0.640
0.640
E2F1
M02954_2.00
Homo sapiens
WWWKGGCGCCMWWW
WWWKGGCGCCMWWW
SELEX
Jolma et al.(2013)
E2F1_3
0.455
0.455
E2F4
M07943_2.00
Homo sapiens
SGCGGGARDNNBVVN
NBBVNNHYTCCCGCS
ChIP-seq
Gerstein et al.(2012)
K562b_E2F4_UCD
0.446
0.446
E2F7
M02960_2.00
Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW
SELEX
Jolma et al.(2013)
E2F7_1
0.596
0.596
E2F1
M02955_2.00
Homo sapiens
AAWKGGCGCCAWTW
WAWTGGCGCCMWTT
SELEX
Jolma et al.(2013)
E2F1_4
0.455
0.455
E2F4
M09036_2.00
Homo sapiens
VDRGGCGGGRVND
HNBYCCCGCCYHB
Misc
Kulakovskiy et al.(2013)
E2F4_HUMAN.H11MO.0.A
0.446
0.446
E2f4
M09037_2.00
Mus musculus
NRDDGGCGGGRMNN
NNKYCCCGCCHHYN
Misc
Kulakovskiy et al.(2013)
E2F4_MOUSE.H11MO.0.A
0.446
0.446
E2F7
M04705_2.00
Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX
0.596
0.596
E2F4
M09524_2.00
Homo sapiens
VGCGSGAADH
DHTTCSCGCB
Misc
Heinz et al.(2010)
K562-E2F4_GSE31477
0.446
0.446
E2F7
M09033_2.00
Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B
0.596
0.596
E2F4
M10457_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_05
0.446
0.446
E2f7
M09040_2.00
Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C
0.596
0.596
E2F1
M04700_2.00
Homo sapiens
NWWWDGGCGCCAAAWH
DWTTTGGCGCCHWWWN
SELEX
Yin et al.(2017)
E2F1_FL_HT-SELEX
0.455
0.455
E2F7
M09522_2.00
Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN
Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673
0.596
0.596
E2F4
M10458_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_Q3
0.446
0.446
E2F7
M04706_2.00
Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX
0.596
0.596
E2FA
M06871_2.00
Arabidopsis thaliana
NDDDGGCGCCAWWW
WWWTGGCGCCHHHN
Dap-seq
OMalley et al.(2016)
E2FA_col_a
0.455
0.455
E2F4
M10459_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_Q6
0.446
0.446
E2F8
M02959_2.00
Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA
SELEX
Jolma et al.(2013)
E2F8_1
0.588
0.588
E2FA
M06872_2.00
Arabidopsis thaliana
DDWDGGCGCCAWAD
HTWTGGCGCCHWHH
Dap-seq
OMalley et al.(2016)
E2FA_colamp_a
0.455
0.455
E2F8
M04703_2.00
Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW
SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX
0.588
0.588
E2FA
M08106_2.00
Arabidopsis thaliana
NVGCGCCAHN
NDTGGCGCBN
ChIP-seq
Mathelier et al.(2014)
MA1414.1
0.455
0.455
E2F8
M04704_2.00
Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX
0.588
0.588
efl-1
M08110_2.00
Caenorhabditis elegans
HNHNSGCGSSAAWWN
NWWTTSSCGCSNDND
ChIP-seq
Mathelier et al.(2014)
MA0541.1
0.455
0.455
E2F6
M08107_2.00
Homo sapiens
DGGMGGGARVN
NBYTCCCKCCH
ChIP-seq
Mathelier et al.(2014)
MA0471.1
0.455
0.455
E2F1
M07938_2.00
Homo sapiens
VRRVNRVGCGSGMDS
SHKCSCGCBYNBYYB
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F1_UCD
0.455
0.455
E2f
M08196_2.00
Drosophila melanogaster
AAWWBSSCGSCAA
TTGSCGSSVWWTT
ChIP-seq
Contrino et al.(2012)
Mf10
0.431
0.431
E2F6
M07939_2.00
Homo sapiens
NDSGCGGGARV
BYTCCCGCSHN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F6_UCD
0.455
0.455
efl-1
M08197_2.00
Caenorhabditis elegans
BGCGSSAAWW
WWTTSSCGCV
ChIP-seq
Contrino et al.(2012)
Mw140
0.431
0.431
E2f5
M09042_2.00
Mus musculus
NGCGCSAAAN
NTTTSGCGCN
Misc
Kulakovskiy et al.(2013)
E2F5_MOUSE.H11MO.0.B
0.431
0.431
E2F6
M07940_2.00
Homo sapiens
NDVGCGGGARV
BYTCCCGCBHN
ChIP-seq
Gerstein et al.(2012)
K562b_E2F6_UCD
0.455
0.455
efl-1
M09526_2.00
Caenorhabditis elegans
WGCAARYGCGCTCYA
TRGAGCGCRYTTGCW
Misc
Heinz et al.(2010)
cElegans-L1-EFL1_modEncode
0.431
0.431
E2F6
M07941_2.00
Homo sapiens
NDSGCGGGARV
BYTCCCGCSHN
ChIP-seq
Gerstein et al.(2012)
K562_E2F6_HudsonAlpha
0.455
0.455
E2F1
M09030_2.00
Homo sapiens
NVNDGGCGGGARVN
NBYTCCCGCCHNBN
Misc
Kulakovskiy et al.(2013)
E2F1_HUMAN.H11MO.0.A
0.455
0.455
E2F6
M09034_2.00
Homo sapiens
NRGGMGGGARRNN
NNYYTCCCKCCYN
Misc
Kulakovskiy et al.(2013)
E2F6_HUMAN.H11MO.0.A
0.455
0.455
E2f1
M09041_2.00
Mus musculus
NDDGGCGGGRVN
NBYCCCGCCHHN
Misc
Kulakovskiy et al.(2013)
E2F1_MOUSE.H11MO.0.A
0.455
0.455
E2f6
M09043_2.00
Mus musculus
NDGGCGGGARVV
BBYTCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F6_MOUSE.H11MO.0.A
0.455
0.455
dpl-1
M09525_2.00
Caenorhabditis elegans
GCGCGYHW
WDRCGCGC
Misc
Heinz et al.(2010)
cElegans-Adult_modEncode
0.455
0.455
E2F1
M09521_2.00
Homo sapiens
NNGGCGGGAA
TTCCCGCCNN
Misc
Heinz et al.(2010)
Hela-E2F1_GSE22478
0.455
0.455
E2F6
M09523_2.00
Homo sapiens
VGCGGGARNN
NNYTCCCGCB
Misc
Heinz et al.(2010)
Hela-E2F6_GSE31477
0.455
0.455
E2F1
M10444_2.00
Homo sapiens
THVGCGCGAAAAHKR
YMDTTTTCGCGCBDA
Transfac
Matys et al.(2006)
V$E2F_01
0.455
0.455
E2F1
M10445_2.00
Homo sapiens
BHKSGCGCSAAA
TTTSGCGCSMDV
Transfac
Matys et al.(2006)
V$E2F_03
0.455
0.455
E2F1
M10446_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_01
0.455
0.455
E2F1
M10447_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_02
0.455
0.455
E2F1
M10448_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3_01
0.455
0.455
E2F1
M10449_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3
0.455
0.455
E2F1
M10450_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_01
0.455
0.455
E2F1
M10451_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_02
0.455
0.455
E2F1
M10452_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4
0.455
0.455
E2F1
M10453_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q6
0.455
0.455
E2F6
M10456_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F6_01
0.455
0.455
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_67050.1
E2F
18
82
KQKSLGLLCSNFVALYDRDDVETVGLDDAARRLGVERRRIYDIVNVLESVGILVRRAKNRYTWIG
MLOC_67050.1
E2F
163
242
KEKSLGLLTQNFVKLFLTMEVETVSLDEAARLLLGERHAESNMRTKVRRLYDIANVLSSLNLIEKTQQVDSRKPAFRWLG
MLOC_67050.2
E2F
18
82
KQKSLGLLCSNFVALYDRDDVETVGLDDAARRLGVERRRIYDIVNVLESVGILVRRAKNRYTWIG
MLOC_67050.2
E2F
162
241
KEKSLGLLTQNFVKLFLTMEVETVSLDEAARLLLGERHAESNMRTKVRRLYDIANVLSSLNLIEKTQQVDSRKPAFRWLG
MLOC_67050.3
E2F
17
81
KQKSLGLLCSNFVALYDRDDVETVGLDDAARRLGVERRRIYDIVNVLESVGILVRRAKNRYTWIG
MLOC_67050.3
E2F
162
205
KEKSLGLLTQNFVKLFLTMEVETVSLDEAARLLLGERHAESNMR
MLOC_67050.4
E2F
17
81
KQKSLGLLCSNFVALYDRDDVETVGLDDAARRLGVERRRIYDIVNVLESVGILVRRAKNRYTWIG
MLOC_67050.4
E2F
161
204
KEKSLGLLTQNFVKLFLTMEVETVSLDEAARLLLGERHAESNMR
MLOC_67050.5
E2F
1
38
MRTKVRRLYDIANVLSSLNLIEKTQQVDSRKPAFRWLG
MLOC_67050.6
E2F
1
62
MEVETVSLDEAARLLLGERHAESNMRTKVRRLYDIANVLSSLNLIEKTQQVDSRKPAFRWLG
MLOC_67050.7
E2F
18
82
KQKSLGLLCSNFVALYDRDDVETVGLDDAARRLGVERRRIYDIVNVLESVGILVRRAKNRYTWIG
Links
Other
E2F
family TFs
Other
Hordeum vulgare
TFs
963 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy