NEMVEDRAFT_v1g200125 (Nematostella vectensis)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 NEMVEDRAFT_v1g200125 T173289_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ENSACAG00000013716
M01960_2.00
Anolis carolinensis
HNVGCGCBND

HNVGCGCBND
PBM
Weirauch et al.(2014)
pTH9221
0.450 0.450
E2F2
M01961_2.00
Homo sapiens
DNSGCGCSNH

DNSGCGCSNH
PBM
Weirauch et al.(2014)
pTH9195
0.450 0.450
E2f2
M00154_2.00
Mus musculus
NDNNGCGSBN

NVSCGCNNHN
PBM
Badis et al.(2009)
E2F2_1022
0.450 0.450
E2F2
M02949_2.00
Homo sapiens
AAAAATGGCGCCAAAAWD

HWTTTTGGCGCCATTTTT
SELEX
Jolma et al.(2013)
E2F2_1
0.450 0.450
E2F2
M02950_2.00
Homo sapiens
VDTTTTGGCGCCAAAAHN

NDTTTTGGCGCCAAAAHB
SELEX
Jolma et al.(2013)
E2F2_2
0.450 0.450
E2F2
M02951_2.00
Homo sapiens
AAAWWGGCGCCAWTTT

AAAWTGGCGCCWWTTT
SELEX
Jolma et al.(2013)
E2F2_3
0.450 0.450
E2F2
M04696_2.00
Homo sapiens
GCGCGCGCSYW

WRSGCGCGCGC
SELEX
Yin et al.(2017)
E2F2_eDBD_HT-SELEX_1
0.450 0.450
E2F2
M04697_2.00
Homo sapiens
NDWWDGGCGCCWWHWN

NWDWWGGCGCCHWWHN
SELEX
Yin et al.(2017)
E2F2_eDBD_HT-SELEX_2
0.450 0.450
E2F2
M09029_2.00
Homo sapiens
GGCGCGMAWC

GWTKCGCGCC
Misc
Kulakovskiy et al.(2013)
E2F2_HUMAN.H11MO.0.B
0.450 0.450
E2f2
M09039_2.00
Mus musculus
GGCGCGMAWC

GWTKCGCGCC
Misc
Kulakovskiy et al.(2013)
E2F2_MOUSE.H11MO.0.B
0.450 0.450
E2F2
M04698_2.00
Homo sapiens
SGBGSGCGCGS

SCGCGCSCVCS
SELEX
Yin et al.(2017)
E2F2_eDBD_Methyl-HT-SELEX_1
0.450 0.450
E2F2
M04699_2.00
Homo sapiens
DWWWDGGCGCCAAAWH

DWTTTGGCGCCHWWWH
SELEX
Yin et al.(2017)
E2F2_eDBD_Methyl-HT-SELEX_2
0.450 0.450
ENSOANG00000014967
M01962_2.00
Ornithorhynchus anatinus
NDSGCGCSHN

NDSGCGCSHN
PBM
Weirauch et al.(2014)
pTH9382
0.433 0.433
estExt_gwp_gw1.C_220046
M01225_2.00
Physcomitrella patens
VGCGCBHHNN

NNDDVGCGCB
PBM
Lambert et al.(2019)
pTH9809
0.433 0.433
estExt_gwp_GeneWisePlus.C_Chr_02.00010270
M01969_2.00
Ostreococcus tauri
HRVGCGCCNN

NNGGCGCBYD
PBM
Weirauch et al.(2014)
pTH5701
0.433 0.433
E2F1
M02952_2.00
Homo sapiens
WWDGGCGCCAAW

WTTGGCGCCHWW
SELEX
Jolma et al.(2013)
E2F1_1
0.433 0.433
E2F1
M02953_2.00
Homo sapiens
WWKGGCGCCWWW

WWWGGCGCCMWW
SELEX
Jolma et al.(2013)
E2F1_2
0.433 0.433
E2F1
M02954_2.00
Homo sapiens
WWWKGGCGCCMWWW

WWWKGGCGCCMWWW
SELEX
Jolma et al.(2013)
E2F1_3
0.433 0.433
E2F1
M02955_2.00
Homo sapiens
AAWKGGCGCCAWTW

WAWTGGCGCCMWTT
SELEX
Jolma et al.(2013)
E2F1_4
0.433 0.433
E2F1
M04700_2.00
Homo sapiens
NWWWDGGCGCCAAAWH

DWTTTGGCGCCHWWWN
SELEX
Yin et al.(2017)
E2F1_FL_HT-SELEX
0.433 0.433
E2F1
M07938_2.00
Homo sapiens
VRRVNRVGCGSGMDS

SHKCSCGCBYNBYYB
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F1_UCD
0.433 0.433
E2F1
M09030_2.00
Homo sapiens
NVNDGGCGGGARVN

NBYTCCCGCCHNBN
Misc
Kulakovskiy et al.(2013)
E2F1_HUMAN.H11MO.0.A
0.433 0.433
E2f1
M09041_2.00
Mus musculus
NDDGGCGGGRVN

NBYCCCGCCHHN
Misc
Kulakovskiy et al.(2013)
E2F1_MOUSE.H11MO.0.A
0.433 0.433
E2F1
M09521_2.00
Homo sapiens
NNGGCGGGAA

TTCCCGCCNN
Misc
Heinz et al.(2010)
Hela-E2F1_GSE22478
0.433 0.433
E2F1
M10444_2.00
Homo sapiens
THVGCGCGAAAAHKR

YMDTTTTCGCGCBDA
Transfac
Matys et al.(2006)
V$E2F_01
0.433 0.433
E2F1
M10445_2.00
Homo sapiens
BHKSGCGCSAAA

TTTSGCGCSMDV
Transfac
Matys et al.(2006)
V$E2F_03
0.433 0.433
E2F1
M10446_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_01
0.433 0.433
E2F1
M10447_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_02
0.433 0.433
E2F1
M10448_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3_01
0.433 0.433
E2F1
M10449_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3
0.433 0.433
E2F1
M10450_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_01
0.433 0.433
E2F1
M10451_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_02
0.433 0.433
E2F1
M10452_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4
0.433 0.433
E2F1
M10453_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q6
0.433 0.433
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDO46727 E2F 19 79

Links

Other E2F family TFs
Other Nematostella vectensis TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL012817 Aedes aegypti AAEL012817 I 0.431
Aan_R005837 Calypte anna Aan_R005837 I 0.431
Aquca_072_00025 Aquilegia coerulea Aquca_072_00025 I 0.450
ASIM_0000970501 Anisakis simplex ASIM_0000970501 I 0.429
BGIOSGA036595 Oryza indica BGIOSGA036595 I 0.431
BRADI4G42050 Brachypodium distachyon BRADI4G42050 I 0.431
D917_10139 Trichinella nativa D917_10139 I 0.433
DI09_107p20 Microsporidia sp DI09_107p20 I 0.462
DILT_0000042001 Diphyllobothrium latum DILT_0000042001 I 0.433
DME_0000040101 Dracunculus medinensis DME_0000040101 I 0.446
EFV59050 Trichinella spiralis EFV59050 I 0.433
E2F1 Erinaceus europaeus ENSEEUG00000009987 I 0.433
ENSFALG00000006710 Ficedula albicollis ENSFALG00000006710 I 0.446
ENSFALG00000010803 Ficedula albicollis ENSFALG00000010803 I 0.450
E2F3 Macaca mulatta ENSMMUG00000017649 I 0.444
ENSPSIG00000015377 Pelodiscus sinensis ENSPSIG00000015377 I 0.433
ENSSHAG00000007275 Sarcophilus harrisii ENSSHAG00000007275 I 0.433
e2f5 Takifugu rubripes ENSTRUG00000002354 I 0.433
E2F3 Tursiops truncatus ENSTTRG00000009038 I 0.429
F775_13418 Aegilops tauschii F775_13418 I 0.431
Gfo_R015254 Geospiza fortis Gfo_R015254 I 0.431
GRMZM2G052515 Zea mays GRMZM2G052515 I 0.431
GSMUA_Achr6G07100_001 Musa acuminata GSMUA_Achr6G07100_001 I 0.450
gw.680.60.1 Branchiostoma floridae gw.680.60.1 I 0.433
HPBE_0002272401 Heligmosomoides bakeri HPBE_0002272401 I 0.450
ISCW005631 Ixodes scapularis ISCW005631 I 0.435
LPERR12G03370 Leersia perrieri LPERR12G03370 I 0.431
maker-piw_contig_136-snap-gene-0.25 Pythium iwayamai maker-piw_contig_136-snap-gene-0.25 I 0.433
ML14475a Mnemiopsis leidyi ML14475a I 0.450
MLOC_11415 Hordeum vulgare MLOC_11415 I 0.431
MTR_4g052000 Medicago truncatula MTR_4g052000 I 0.433
NERG_02347 Nematocida sp NERG_02347 I 0.446
nRc.2.0.1.g30898 Romanomermis culicivorax nRc.2.0.1.g30898 I 0.446
OB12G13530 Oryza brachyantha OB12G13530 I 0.431
OBART12G03570 Oryza barthii OBART12G03570 I 0.431
Ocbimv22032616m.g Octopus bimaculoides Ocbimv22032616m.g I 0.431
OGLUM12G04270 Oryza glumaepatula OGLUM12G04270 I 0.431
OLONG_000194 Oryza longistaminata OLONG_000194 I 0.431
OMERI12G01820 Oryza meridionalis OMERI12G01820 I 0.431
ONIVA12G03230 Oryza nivara ONIVA12G03230 I 0.431
OPUNC12G03430 Oryza punctata OPUNC12G03430 I 0.431
ORGLA12G0034600 Oryza glaberrima ORGLA12G0034600 I 0.431
ORUFI12G04170 Oryza rufipogon ORUFI12G04170 I 0.431
OS12G0158800 Oryza sativa OS12G0158800 I 0.431
Pavir.Ca00172 Panicum virgatum Pavir.Ca00172 I 0.431
Pavir.J28624 Panicum virgatum Pavir.J28624 I 0.431
Pavir.J38646 Panicum virgatum Pavir.J38646 I 0.433
POPTR_0004s21100 Populus trichocarpa POPTR_0004s21100 I 0.433
Pvit_05435 Pogona vitticeps Pvit_05435 I 0.433
SapurV1A.0125s0090 Salix purpurea SapurV1A.0125s0090 I 0.433
Sb08g003670 Sorghum bicolor Sb08g003670 I 0.431
Si010044m.g Setaria italica Si010044m.g I 0.431
Traes_5AL_7FFD17EDE Triticum aestivum Traes_5AL_7FFD17EDE I 0.431
Traes_5BL_9F73E599F Triticum aestivum Traes_5BL_9F73E599F I 0.431
Traes_5DL_26C867084 Triticum aestivum Traes_5DL_26C867084 I 0.431
TRIUR3_33184 Triticum urartu TRIUR3_33184 I 0.431