CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NEMVEDRAFT_v1g96966
(
Nematostella vectensis
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
NEMVEDRAFT_v1g96966
T173294_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
E2f3
M00153_2.00
Mus musculus
NNNNGCGSNN
NNSCGCNNNN
PBM
Badis et al.(2009)
E2F3_3752
0.431
0.431
E2F3
M02956_2.00
Homo sapiens
RAAAAKGGCGCCAAAANN
NNTTTTGGCGCCMTTTTY
SELEX
Jolma et al.(2013)
E2F3_1
0.431
0.431
E2F3
M02957_2.00
Homo sapiens
DAAAADGGCGCCMWWTTY
RAAWWKGGCGCCHTTTTH
SELEX
Jolma et al.(2013)
E2F3_2
0.431
0.431
E2F3
M02958_2.00
Homo sapiens
NDTTTTGGCGCCAAAABH
DVTTTTGGCGCCAAAAHN
SELEX
Jolma et al.(2013)
E2F3_3
0.431
0.431
E2F3
M04701_2.00
Homo sapiens
DWTTTGGCGCCAAAWH
DWTTTGGCGCCAAAWH
SELEX
Yin et al.(2017)
E2F3_eDBD_HT-SELEX
0.431
0.431
E2f
M08196_2.00
Drosophila melanogaster
AAWWBSSCGSCAA
TTGSCGSSVWWTT
ChIP-seq
Contrino et al.(2012)
Mf10
0.431
0.431
E2F3
M09031_2.00
Homo sapiens
NDGGCGGGAAR
YTTCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F3_HUMAN.H11MO.0.A
0.431
0.431
E2f3
M09038_2.00
Mus musculus
DSGCGGGARV
BYTCCCGCSH
Misc
Kulakovskiy et al.(2013)
E2F3_MOUSE.H11MO.0.A
0.431
0.431
E2F3
M10454_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q6_01
0.431
0.431
E2F3
M10455_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F3_Q6
0.431
0.431
E2F3
M04702_2.00
Homo sapiens
DTTTTGGCGCCAAAAH
DTTTTGGCGCCAAAAH
SELEX
Yin et al.(2017)
E2F3_eDBD_Methyl-HT-SELEX
0.431
0.431
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO43783
E2F
1
58
MTKSLISLMNNSPNGVADINEAATRMCVDKRRIYDIVNIMEGAGVVQRLTKTSVKMRT
Links
Other
E2F
family TFs
Other
Nematostella vectensis
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy