CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI06G10800
(
Oryza meridionalis
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
OMERI06G10800
T173344_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
E2FC
M06870_2.00
Arabidopsis thaliana
AWDDDGGCGCCAAAR
YTTTGGCGCCHHHWT
Dap-seq
OMalley et al.(2016)
E2FC_col_a
0.451
0.451
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI06G10800.1
E2F
96
175
KEKSLGLLTQNFVKLFLTMEIETISLDEAAKRLLGEGHAANNMRTKVRRLYDIANVLSSLNLIEKTQQADSRKPAFRWLG
OMERI06G10800.2
E2F
96
175
KEKSLGLLTQNFVKLFLTMEIETISLDEAAKRLLGEGHAANNMRTKVRRLYDIANVLSSLNLIEKTQQADSRKPAFRWLG
OMERI06G10800.3
E2F
96
175
KEKSLGLLTQNFVKLFLTMEIETISLDEAAKRLLGEGHAANNMRTKVRRLYDIANVLSSLNLIEKTQQADSRKPAFRWLG
OMERI06G10800.4
E2F
83
162
KEKSLGLLTQNFVKLFLTMEIETISLDEAAKRLLGEGHAANNMRTKVRRLYDIANVLSSLNLIEKTQQADSRKPAFRWLG
Links
Other
E2F
family TFs
Other
Oryza meridionalis
TFs
374 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy