OS06G0245900 (Oryza sativa)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 OS06G0245900 T173389_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
E2FE
M01958_2.00
Arabidopsis thaliana
HDSGCGCSHD

HDSGCGCSHD
PBM
Weirauch et al.(2014)
pTH8176
0.787 0.787
E2FE
M06873_2.00
Arabidopsis thaliana
TTTTGGCGGGAAAWWNWNDDN

NHHNWNWWTTTCCCGCCAAAA
Dap-seq
OMalley et al.(2016)
DEL1_col_a
0.787 0.787
E2FE
M06874_2.00
Arabidopsis thaliana
DTTTTGGCGGGAAAA

TTTTCCCGCCAAAAH
Dap-seq
OMalley et al.(2016)
DEL1_colamp_a
0.787 0.787
E2FD
M06875_2.00
Arabidopsis thaliana
DWWHDDTTTTGGCGGGAAAW

WTTTCCCGCCAAAAHHDWWH
Dap-seq
OMalley et al.(2016)
DEL2_col_a
0.647 0.647
E2FD
M06876_2.00
Arabidopsis thaliana
DTTTTGGCGGGAAAA

TTTTCCCGCCAAAAH
Dap-seq
OMalley et al.(2016)
DEL2_colamp_a
0.647 0.647
E2FD
M10442_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$E2L1_Q2
0.647 0.647
E2FD
M10443_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$E2L_Q2
0.647 0.647
E2F8
M02959_2.00
Homo sapiens
TTTGGCGGGAAA

TTTCCCGCCAAA
SELEX
Jolma et al.(2013)
E2F8_1
0.588 0.588
E2F8
M04703_2.00
Homo sapiens
WDKTGGCGGGARNN

NNYTCCCGCCAMHW
SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX
0.588 0.588
E2F8
M04704_2.00
Homo sapiens
WTTTGGCGGGAAWN

NWTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX
0.588 0.588
E2F7
M02960_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Jolma et al.(2013)
E2F7_1
0.581 0.581
E2F7
M04705_2.00
Homo sapiens
WTTTGGCGGGAAAN

NTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX
0.581 0.581
E2F7
M09033_2.00
Homo sapiens
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B
0.581 0.581
E2f7
M09040_2.00
Mus musculus
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C
0.581 0.581
E2F7
M09522_2.00
Homo sapiens
NSGCGSGAAMNN

NNKTTCSCGCSN
Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673
0.581 0.581
E2F7
M04706_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX
0.581 0.581
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS06T0245900-01 E2F 58 122
OS06T0245900-01 E2F 204 283

Links

Other E2F family TFs
Other Oryza sativa TFs

323 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
1127_YBL066C Saccharomyces bayanus 1127_YBL066C N 0.000
1560_Multiple Saccharomyces mikatae 1560_Multiple N 0.000
593_YBL066C Saccharomyces paradoxus 593_YBL066C N 0.000
AACERI_AaceriAGR369W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGR369W N 0.000
AGOS_AGR369W Ashbya gossypii AGOS_AGR369W N 0.000
BN7_4777 Wickerhamomyces ciferrii BN7_4777 N 0.000
CAGL0A04455g Candida glabrata CAGL0A04455g N 0.000
CANTEDRAFT_137002 Candida tenuis CANTEDRAFT_137002 N 0.000
CLUG_03762 Clavispora lusitaniae CLUG_03762 N 0.000
CLUG_03762 Candida lusitaniae CLUG_03762 N 0.000
CORT_0A01490 Candida orthopsilosis CORT_0A01490 N 0.000
CPAG_04485 Candida parapsilosis CPAG_04485 N 0.000
DEHA2C16676g Debaryomyces hansenii DEHA2C16676g N 0.000
Ecym_4686 Eremothecium cymbalariae Ecym_4686 N 0.000
estExt_gwp_genewisePlus_worm.C_chr_3.10726 Pichia stipitis estExt_gwp_genewisePlus_worm.C_chr_3.10726 N 0.000
GNLVRS01_PISO0K22054g Millerozyma farinosa GNLVRS01_PISO0K22054g N 0.000
GNLVRS01_PISO0L22055g Millerozyma farinosa GNLVRS01_PISO0L22055g N 0.000
HPODL_03022 Ogataea parapolymorpha HPODL_03022 N 0.000
JL09_g740 Pichia kudriavzevii JL09_g740 N 0.000
KLLA0_E20307g Kluyveromyces lactis KLLA0_E20307g N 0.000
KLTH0C06776g Lachancea thermotolerans KLTH0C06776g N 0.000
KLTH0C06776g Kluyveromyces thermotolerans KLTH0C06776g N 0.000
Kpol_1018p92 Vanderwaltozyma polyspora Kpol_1018p92 N 0.000
KUCA_T00001887001 Kuraishia capsulata KUCA_T00001887001 N 0.000
Kwal_10852 Kluyveromyces waltii Kwal_10852 N 0.000
LALA0_S01e06766g Lachancea lanzarotensis LALA0_S01e06766g N 0.000
LELG_00073 Lodderomyces elongisporus LELG_00073 N 0.000
PGUG_03868 Candida guilliermondii PGUG_03868 N 0.000
PGUG_03868 Meyerozyma guilliermondii PGUG_03868 N 0.000
PICST_82707 Scheffersomyces stipitis PICST_82707 N 0.000
SAKL0F12342g Lachancea kluyveri SAKL0F12342g N 0.000
SKUD_188909 Saccharomyces kudriavzevii SKUD_188909 N 0.000
SPAPADRAFT_149277 Spathaspora passalidarum SPAPADRAFT_149277 N 0.000
SU7_0079 Saccharomyces arboricola SU7_0079 N 0.000
TBLA_0D00630 Tetrapisispora blattae TBLA_0D00630 N 0.000
TDEL_0C01580 Torulaspora delbrueckii TDEL_0C01580 N 0.000
XP_002493143.1 Pichia pastoris XP_002493143.1 N 0.000
SEF1 Saccharomyces cerevisiae YBL066C N 0.000
ZBAI_00728 Zygosaccharomyces bailii ZBAI_00728 N 0.000
ZBAI_06026 Zygosaccharomyces bailii ZBAI_06026 N 0.000
ZYRO0B03278g Zygosaccharomyces rouxii ZYRO0B03278g N 0.000