PPA21298 (Pristionchus pacificus)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 PPA21298 T173433_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
E2F8
M02959_2.00 		Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA		 SELEX
Jolma et al.(2013)
E2F8_1 		0.448 0.448
E2F8
M04703_2.00 		Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW		 SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX 		0.448 0.448
E2F8
M04704_2.00 		Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX 		0.448 0.448
E2F7
M02960_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Jolma et al.(2013)
E2F7_1 		0.440 0.440
E2F7
M04705_2.00 		Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX 		0.440 0.440
E2F7
M09033_2.00 		Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B 		0.440 0.440
E2f7
M09040_2.00 		Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C 		0.440 0.440
E2F7
M09522_2.00 		Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN		 Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673 		0.440 0.440
E2F7
M04706_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX 		0.440 0.440
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA21298 E2F 92 160
PPA21298 E2F 260 341

Links

Other E2F family TFs
Other Pristionchus pacificus TFs

172 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold884-EXSNAP2012.1 Pristionchus exspectatus scaffold884-EXSNAP2012.1 I 0.993
scaffold51-EXSNAP2012.35 Pristionchus exspectatus scaffold51-EXSNAP2012.35 I 0.993
TCNE_0000873901 Toxocara canis TCNE_0000873901 I 0.843
SMUV_0000434101 Syphacia muris SMUV_0000434101 I 0.828
DICVIV_01764 Dictyocaulus viviparus DICVIV_01764 I 0.806
ASU_04096 Ascaris suum ASU_04096 I 0.806
HCOI01892600 Haemonchus contortus HCOI01892600 I 0.806
ALUE_0000773501 Ascaris lumbricoides ALUE_0000773501 I 0.806
TELCIR_03927 Teladorsagia circumcincta TELCIR_03927 I 0.800
ASIM_0001001801 Anisakis simplex ASIM_0001001801 I 0.785
efl-3 Caenorhabditis elegans WBGene00009899 I 0.784
CJA26768 Caenorhabditis japonica CJA26768 I 0.784
CBN23380 Caenorhabditis brenneri CBN23380 I 0.778
CRE01589 Caenorhabditis remanei CRE01589 I 0.778
CBG00680 Caenorhabditis briggsae CBG00680 I 0.770
HPBE_0000610601 Heligmosomoides bakeri HPBE_0000610601 I 0.769
ACAC_0000024001 Angiostrongylus cantonensis ACAC_0000024001 I 0.769
ANCCAN_04600 Ancylostoma caninum ANCCAN_04600 I 0.769
OESDEN_13289 Oesophagostomum dentatum OESDEN_13289 I 0.748
L893_g19965 Steinernema glaseri L893_g19965 I 0.727
L892_g1818 Steinernema scapterisci L892_g1818 I 0.724
L596_g12895 Steinernema carpocapsae L596_g12895 I 0.724
BXY_1693900 Bursaphelenchus xylophilus BXY_1693900 I 0.709
L889_g28422 Steinernema feltiae L889_g28422 I 0.709
augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 I 0.702
CGOC_0000227901 Cylicostephanus goldi CGOC_0000227901 N 0.701
Minc04041 Meloidogyne incognita Minc04041 I 0.687
Minc05731 Meloidogyne incognita Minc05731 I 0.687
MhA1_Contig130.frz3.gene44 Meloidogyne hapla MhA1_Contig130.frz3.gene44 I 0.687
maker-nMf.1.1.scaf01659-augustus-gene-0.9 Meloidogyne floridensis maker-nMf.1.1.scaf01659-augustus-gene-0.9 I 0.687
L898_g3621 Steinernema monticolum L898_g3621 I 0.679
EVEC_0001263301 Enterobius vermicularis EVEC_0001263301 N 0.649
OESDEN_14635 Oesophagostomum dentatum OESDEN_14635 I 0.582
SVUK_0001371201 Strongylus vulgaris SVUK_0001371201 I 0.582
nDi.2.2.2.g08162 Dirofilaria immitis nDi.2.2.2.g08162 N 0.564
nLs.2.1.2.g03748 Litomosoides sigmodontis nLs.2.1.2.g03748 N 0.561
LOAG_07147 Loa loa LOAG_07147 N 0.560
WUBG_01805 Wuchereria bancrofti WUBG_01805 N 0.560
OFLC_0000212001 Onchocerca flexuosa OFLC_0000212001 N 0.556
nOo.2.0.1.g06441 Onchocerca ochengi nOo.2.0.1.g06441 N 0.552
WBGene00247952 Onchocerca volvulus WBGene00247952 N 0.552
Bm4234 Brugia malayi Bm4234 N 0.552
DME_0000727201 Dracunculus medinensis DME_0000727201 I 0.515
TELCIR_22846 Teladorsagia circumcincta TELCIR_22846 I 0.493
TCLT_0000737401 Thelazia callipaeda TCLT_0000737401 N 0.493
NECAME_17546 Necator americanus NECAME_17546 N 0.470
e2f8 Takifugu rubripes ENSTRUG00000015792 I 0.463
ENSLOCG00000016279 Lepisosteus oculatus ENSLOCG00000016279 I 0.463
e2f8.L Xenopus laevis XB-GENE-1219153 I 0.463
e2f8 Gasterosteus aculeatus ENSGACG00000017086 I 0.456
XP_002942881 Xenopus tropicalis XP_002942881 I 0.456
ENSONIG00000007135 Oreochromis niloticus ENSONIG00000007135 I 0.455
ENSPSIG00000008707 Pelodiscus sinensis ENSPSIG00000008707 I 0.455
Afo_R006642 Aptenodytes forsteri Afo_R006642 I 0.455
Pvit_10252 Pogona vitticeps Pvit_10252 I 0.455
ENSLOCG00000004831 Lepisosteus oculatus ENSLOCG00000004831 I 0.455
e2f8 Tetraodon nigroviridis ENSTNIG00000009615 I 0.449
Ogr19156 Ophisaurus gracilis Ogr19156 I 0.449
E2F8 Equus caballus ENSECAG00000016457 I 0.449
Tal_R008430 Tyto alba Tal_R008430 I 0.449
Aan_R006648 Calypte anna Aan_R006648 I 0.449
ENSGMOG00000019253 Gadus morhua ENSGMOG00000019253 I 0.449
Cmyd_10011734 Chelonia mydas Cmyd_10011734 I 0.448
Brh_R011115 Buceros rhinoceros Brh_R011115 I 0.448
E2F8 Pan troglodytes ENSPTRG00000003435 I 0.448
Alligator_sinensis_CCG013028.1 Alligator sinensis Alligator_sinensis_CCG013028.1 I 0.448
Alligator_sinensis_CCG013028.2 Alligator sinensis Alligator_sinensis_CCG013028.2 I 0.448
ENSPSIG00000012629 Pelodiscus sinensis ENSPSIG00000012629 I 0.448
Cmyd_10016427 Chelonia mydas Cmyd_10016427 I 0.448
Gfo_R003976 Geospiza fortis Gfo_R003976 I 0.448
E2F8 Tursiops truncatus ENSTTRG00000005707 I 0.448
ENSAMXG00000016864 Astyanax mexicanus ENSAMXG00000016864 I 0.448
ENSAPLG00000009091 Anas platyrhynchos ENSAPLG00000009091 I 0.448
E2F7 Anolis carolinensis ENSACAG00000005414 I 0.441
E2F8 Homo sapiens ENSG00000129173 D 0.441
ENSSHAG00000018372 Sarcophilus harrisii ENSSHAG00000018372 I 0.441
ENSCSAG00000005093 Chlorocebus sabaeus ENSCSAG00000005093 I 0.441
ENSDORG00000003404 Dipodomys ordii ENSDORG00000003404 I 0.441
ENSPANG00000005225 Papio anubis ENSPANG00000005225 I 0.441
ENSNLEG00000017803 Nomascus leucogenys ENSNLEG00000017803 I 0.441
ENSP00000379463 Macaca fascicularis ENSP00000379463 I 0.441
Myotis_brandtii_E2F7_10034114 Myotis brandtii Myotis_brandtii_E2F7_10034114 I 0.441
E2F8 Macaca mulatta ENSMMUG00000010853 I 0.441
Alligator_sinensis_CCG013467.1 Alligator sinensis Alligator_sinensis_CCG013467.1 I 0.441
ENSPPYG00000003424 Pongo abelii ENSPPYG00000003424 I 0.441
E2F8 Monodelphis domestica ENSMODG00000009029 I 0.441
E2F7 Myotis lucifugus ENSMLUG00000012116 I 0.441
ENSTSYG00000007279 Tarsius syrichta ENSTSYG00000007279 I 0.440
E2F7 Vicugna pacos ENSVPAG00000011151 I 0.440
ENSTSYG00000008243 Tarsius syrichta ENSTSYG00000008243 I 0.440
Myotis_brandtii_E2F8_10018668 Myotis brandtii Myotis_brandtii_E2F8_10018668 I 0.440
Brh_R005316 Buceros rhinoceros Brh_R005316 I 0.440
ENSBTAP00000022518-D1 Bos grunniens ENSBTAP00000022518-D1 I 0.440
Afo_R014077 Aptenodytes forsteri Afo_R014077 I 0.440
LotgiG168338 Lottia gigantea LotgiG168338 I 0.440
Tal_R000495 Tyto alba Tal_R000495 I 0.440
E2F8 Pteropus vampyrus ENSPVAG00000012522 I 0.440
E2F8 Myotis lucifugus ENSMLUG00000015592 I 0.440
E2F7 Monodelphis domestica ENSMODG00000020465 I 0.440
E2F8 Meleagris gallopavo ENSMGAG00000002303 I 0.440
ENSMEUG00000008461 Macropus eugenii ENSMEUG00000008461 I 0.440
E2F8 Loxodonta africana ENSLAFG00000022713 I 0.440
E2F7 Taeniopygia guttata ENSTGUG00000007515 I 0.440
E2f8 Mus musculus ENSMUSG00000046179 I 0.440
E2F8 Oryctolagus cuniculus ENSOCUG00000004485 I 0.440
ENSOARG00000014941 Ovis aries ENSOARG00000014941 I 0.440
ENSOARG00000008807 Ovis aries ENSOARG00000008807 I 0.440
E2F8 Ornithorhynchus anatinus ENSOANG00000011290 I 0.440
E2F7 Loxodonta africana ENSLAFG00000017902 I 0.440
ENSLACG00000016113 Latimeria chalumnae ENSLACG00000016113 I 0.440
E2F8 Cavia porcellus ENSCPOG00000013766 I 0.440
e2f7 Danio rerio ENSDARG00000008986 I 0.440
E2F8 Canis familiaris ENSCAFG00000009431 I 0.440
E2F7 Bos taurus ENSBTAG00000016931 I 0.440
ENSAMEG00000017950 Ailuropoda melanoleuca ENSAMEG00000017950 I 0.440
e2f8 Danio rerio ENSDARG00000057323 I 0.440
E2F7 Dasypus novemcinctus ENSDNOG00000001580 I 0.440
ENSGALG00000004023 Gallus gallus ENSGALG00000004023 I 0.440
ENSFALG00000010433 Ficedula albicollis ENSFALG00000010433 I 0.440
E2F8 Erinaceus europaeus ENSEEUG00000011472 I 0.440
E2F8 Dasypus novemcinctus ENSDNOG00000003349 I 0.440
E2F7 Oryctolagus cuniculus ENSOCUG00000004932 I 0.440
ENSMPUG00000013899 Mustela putorius furo ENSMPUG00000013899 I 0.440
E2f8 Rattus norvegicus ENSRNOG00000022537 I 0.440
E2F7 Sus scrofa ENSSSCG00000000950 I 0.440
E2F8 Sus scrofa ENSSSCG00000013352 I 0.440
ENSPFOG00000003272 Poecilia formosa ENSPFOG00000003272 I 0.440
e2f8 Oryzias latipes ENSORLG00000000786 I 0.440
ENSSTOG00000008838 Ictidomys tridecemlineatus ENSSTOG00000008838 I 0.440
ENSSHAG00000002919 Sarcophilus harrisii ENSSHAG00000002919 I 0.440
E2F8 Otolemur garnettii ENSOGAG00000005774 I 0.440
E2F8 Felis catus ENSFCAG00000010706 I 0.434
E2F7 Sorex araneus ENSSARG00000004122 I 0.434
ENSXMAG00000006252 Xiphophorus maculatus ENSXMAG00000006252 I 0.434
ENSECAG00000017963 Equus caballus ENSECAG00000017963 I 0.434
E2F7 Tursiops truncatus ENSTTRG00000000110 I 0.434
ENSSTOG00000007887 Ictidomys tridecemlineatus ENSSTOG00000007887 I 0.434
E2F7 Tupaia belangeri ENSTBEG00000005417 I 0.434
ENSAMEG00000007247 Ailuropoda melanoleuca ENSAMEG00000007247 I 0.434
CapteG198117 Capitella teleta CapteG198117 I 0.434
E2F8 Choloepus hoffmanni ENSCHOG00000006322 I 0.434
E2F8 Callithrix jacchus ENSCJAG00000006811 I 0.434
ENSP00000323246 Macaca fascicularis ENSP00000323246 I 0.434
E2F7 Cavia porcellus ENSCPOG00000007375 I 0.434
E2F7 Callithrix jacchus ENSCJAG00000019162 I 0.434
ENSCSAG00000003998 Chlorocebus sabaeus ENSCSAG00000003998 I 0.434
E2F7 Felis catus ENSFCAG00000010756 I 0.434
E2F7 Homo sapiens ENSG00000165891 D 0.434
ENSPPYG00000004791 Pongo abelii ENSPPYG00000004791 I 0.434
E2F7 Pan troglodytes ENSPTRG00000005245 I 0.434
ENSMPUG00000017468 Mustela putorius furo ENSMPUG00000017468 I 0.434
E2f7 Mus musculus ENSMUSG00000020185 D 0.434
E2F7 Otolemur garnettii ENSOGAG00000010821 I 0.434
ENSNLEG00000004897 Nomascus leucogenys ENSNLEG00000004897 I 0.434
ENSPANG00000004929 Papio anubis ENSPANG00000004929 I 0.434
E2F7 Pteropus vampyrus ENSPVAG00000000288 I 0.434
E2F7 Macaca mulatta ENSMMUG00000022846 I 0.434
Aan_R005623 Calypte anna Aan_R005623 I 0.434
E2F7 Gorilla gorilla ENSGGOG00000012645 I 0.434
E2f7 Rattus norvegicus ENSRNOG00000026252 I 0.434
NV16280 Nasonia vitripennis NV16280 I 0.434
E2F7 Ochotona princeps ENSOPRG00000001896 I 0.433
ENSONIG00000012070 Oreochromis niloticus ENSONIG00000012070 I 0.433
CGI_10023548 Crassostrea gigas CGI_10023548 I 0.433
E2F7 Canis familiaris ENSCAFG00000005718 I 0.433
e2f7 Takifugu rubripes ENSTRUG00000001843 I 0.433
ENSFALG00000001625 Ficedula albicollis ENSFALG00000001625 I 0.433
E2f8 Dipodomys ordii ENSDORG00000000040 I 0.433
E2F7 Procavia capensis ENSPCAG00000000596 I 0.433
ENSLACG00000014031 Latimeria chalumnae ENSLACG00000014031 I 0.433
gw1.8.144.1 Ostreococcus RCC809 gw1.8.144.1 I 0.433
E2F7 Echinops telfairi ENSETEG00000014750 I 0.433