CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc06g074010.2
(
Solanum lycopersicum
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
Solyc06g074010.2
T173492_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.38.2.1
M01968_2.00
Physcomitrella patens
NSGCGCBHHN
NDDVGCGCSN
PBM
Weirauch et al.(2014)
pTH5707
0.431
0.431
estExt_gwp_gw1.C_220046
M01225_2.00
Physcomitrella patens
VGCGCBHHNN
NNDDVGCGCB
PBM
Lambert et al.(2019)
pTH9809
0.431
0.431
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc06g074010.2.1
E2F
125
189
YDNSLGLLTKKFINLLKHAKDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNMIQWKG
Solyc06g074010.2.1
E2F
529
593
YDNSLGFLTKKFINLIKHSEDGVLDLNKAADTLEVKKRRLYDVTSVLEGIGLIEKKSLNMIQWEG
Links
Other
E2F
family TFs
Other
Solanum lycopersicum
TFs
108 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy