estExt_fgenesh2_pg.C_30256 (Monosiga brevicollis)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 estExt_fgenesh2_pg.C_30256 T173823_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
E2F8
M02959_2.00
Homo sapiens
TTTGGCGGGAAA

TTTCCCGCCAAA
SELEX
Jolma et al.(2013)
E2F8_1
0.500 0.500
E2F8
M04703_2.00
Homo sapiens
WDKTGGCGGGARNN

NNYTCCCGCCAMHW
SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX
0.500 0.500
E2F8
M04704_2.00
Homo sapiens
WTTTGGCGGGAAWN

NWTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX
0.500 0.500
E2F7
M02960_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Jolma et al.(2013)
E2F7_1
0.493 0.493
E2F7
M04705_2.00
Homo sapiens
WTTTGGCGGGAAAN

NTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX
0.493 0.493
E2F7
M09033_2.00
Homo sapiens
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B
0.493 0.493
E2f7
M09040_2.00
Mus musculus
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C
0.493 0.493
E2F7
M09522_2.00
Homo sapiens
NSGCGSGAAMNN

NNKTTCSCGCSN
Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673
0.493 0.493
E2F7
M04706_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX
0.493 0.493
E2FE
M01958_2.00
Arabidopsis thaliana
HDSGCGCSHD

HDSGCGCSHD
PBM
Weirauch et al.(2014)
pTH8176
0.441 0.441
E2FE
M06873_2.00
Arabidopsis thaliana
TTTTGGCGGGAAAWWNWNDDN

NHHNWNWWTTTCCCGCCAAAA
Dap-seq
OMalley et al.(2016)
DEL1_col_a
0.441 0.441
E2FE
M06874_2.00
Arabidopsis thaliana
DTTTTGGCGGGAAAA

TTTTCCCGCCAAAAH
Dap-seq
OMalley et al.(2016)
DEL1_colamp_a
0.441 0.441
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_30256 E2F 167 231
estExt_fgenesh2_pg.C_30256 E2F 267 348

Links

Other E2F family TFs
Other Monosiga brevicollis TFs

252 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
gw.270.22.1 Branchiostoma floridae gw.270.22.1 I 0.551
PTSG_03407 Salpingoeca rosetta PTSG_03407 I 0.541
Sakowv30003251m.g Saccoglossus kowalevskii Sakowv30003251m.g I 0.531
e2f8 Danio rerio ENSDARG00000057323 I 0.529
ENSAMXG00000016864 Astyanax mexicanus ENSAMXG00000016864 I 0.515
Myotis_brandtii_E2F8_10018668 Myotis brandtii Myotis_brandtii_E2F8_10018668 I 0.507
E2F8 Pan troglodytes ENSPTRG00000003435 I 0.507
E2F8 Myotis lucifugus ENSMLUG00000015592 I 0.507
E2F8 Anolis carolinensis ENSACAG00000015743 I 0.507
EuGene.0800010516 Micromonas sp RCC299 EuGene.0800010516 I 0.507
e2f7 Danio rerio ENSDARG00000008986 I 0.507
ENSSTOG00000008838 Ictidomys tridecemlineatus ENSSTOG00000008838 I 0.507
ENSLOCG00000004831 Lepisosteus oculatus ENSLOCG00000004831 I 0.507
e2f8 Gasterosteus aculeatus ENSGACG00000017086 I 0.500
E2F8 Homo sapiens ENSG00000129173 D 0.500
ENSTSYG00000007279 Tarsius syrichta ENSTSYG00000007279 I 0.500
ENSCSAG00000005093 Chlorocebus sabaeus ENSCSAG00000005093 I 0.500
E2F8 Dasypus novemcinctus ENSDNOG00000003349 I 0.500
E2F8 Tursiops truncatus ENSTTRG00000005707 I 0.500
e2f7 Takifugu rubripes ENSTRUG00000001843 I 0.500
e2f7 Tetraodon nigroviridis ENSTNIG00000005126 I 0.500
E2F8 Loxodonta africana ENSLAFG00000022713 I 0.500
ENSNLEG00000017803 Nomascus leucogenys ENSNLEG00000017803 I 0.500
ENSONIG00000012070 Oreochromis niloticus ENSONIG00000012070 I 0.500
ENSONIG00000007135 Oreochromis niloticus ENSONIG00000007135 I 0.500
ENSOARG00000008807 Ovis aries ENSOARG00000008807 I 0.500
E2F8 Oryctolagus cuniculus ENSOCUG00000004485 I 0.500
E2f8 Mus musculus ENSMUSG00000046179 I 0.500
e2f8 Oryzias latipes ENSORLG00000000786 I 0.500
E2F8 Pteropus vampyrus ENSPVAG00000012522 I 0.500
E2f8 Rattus norvegicus ENSRNOG00000022537 I 0.500
ENSXMAG00000010237 Xiphophorus maculatus ENSXMAG00000010237 I 0.500
ENSLOCG00000016279 Lepisosteus oculatus ENSLOCG00000016279 I 0.500
ENSPPYG00000003424 Pongo abelii ENSPPYG00000003424 I 0.500
E2F8 Sus scrofa ENSSSCG00000013352 I 0.500
E2f8 Dipodomys ordii ENSDORG00000000040 I 0.500
ENSCING00000014484 Ciona intestinalis ENSCING00000014484 I 0.500
Pvit_06409 Pogona vitticeps Pvit_06409 I 0.500
Ogr19156 Ophisaurus gracilis Ogr19156 I 0.500
E2F8 Cavia porcellus ENSCPOG00000013766 I 0.500
E2F8 Choloepus hoffmanni ENSCHOG00000006322 I 0.500
EuGene.0000050713 Micromonas pusilla EuGene.0000050713 I 0.500
E2F7 Anolis carolinensis ENSACAG00000005414 I 0.500
fgenesh1_pg.scaffold_172000049 Physcomitrella patens fgenesh1_pg.scaffold_172000049 I 0.500
ENSPSIG00000012629 Pelodiscus sinensis ENSPSIG00000012629 I 0.493
Myotis_brandtii_E2F7_10034114 Myotis brandtii Myotis_brandtii_E2F7_10034114 I 0.493
Gfo_R003976 Geospiza fortis Gfo_R003976 I 0.493
E2F7 Pan troglodytes ENSPTRG00000005245 I 0.493
ENSPPYG00000004791 Pongo abelii ENSPPYG00000004791 I 0.493
ENSP00000379463 Macaca fascicularis ENSP00000379463 I 0.493
E2F7 Pteropus vampyrus ENSPVAG00000000288 I 0.493
ENSP00000323246 Macaca fascicularis ENSP00000323246 I 0.493
ENSPANG00000004929 Papio anubis ENSPANG00000004929 I 0.493
Tal_R008430 Tyto alba Tal_R008430 I 0.493
E2F7 Otolemur garnettii ENSOGAG00000010821 I 0.493
0800010288 Ostreococcus tauri 0800010288 I 0.493
Tal_R000495 Tyto alba Tal_R000495 I 0.493
Pvit_10252 Pogona vitticeps Pvit_10252 I 0.493
ENSPANG00000005225 Papio anubis ENSPANG00000005225 I 0.493
ENSBTAP00000022518-D1 Bos grunniens ENSBTAP00000022518-D1 I 0.493
E2F7 Ochotona princeps ENSOPRG00000001896 I 0.493
E2F7 Procavia capensis ENSPCAG00000000596 I 0.493
E2f7 Rattus norvegicus ENSRNOG00000026252 I 0.493
Afo_R006642 Aptenodytes forsteri Afo_R006642 I 0.493
e2f8 Takifugu rubripes ENSTRUG00000015792 I 0.493
Afo_R014077 Aptenodytes forsteri Afo_R014077 I 0.493
e2f8 Tetraodon nigroviridis ENSTNIG00000009615 I 0.493
E2F8 Otolemur garnettii ENSOGAG00000005774 I 0.493
Aan_R006648 Calypte anna Aan_R006648 I 0.493
GUITHDRAFT_133924 Guillardia theta GUITHDRAFT_133924 I 0.493
Aan_R005623 Calypte anna Aan_R005623 I 0.493
E2F7 Vicugna pacos ENSVPAG00000011151 I 0.493
Alligator_sinensis_CCG013028.1 Alligator sinensis Alligator_sinensis_CCG013028.1 I 0.493
E2F7 Taeniopygia guttata ENSTGUG00000007515 I 0.493
Brh_R011115 Buceros rhinoceros Brh_R011115 I 0.493
ENSSHAG00000018372 Sarcophilus harrisii ENSSHAG00000018372 I 0.493
ENSSHAG00000002919 Sarcophilus harrisii ENSSHAG00000002919 I 0.493
E2F7 Sorex araneus ENSSARG00000004122 I 0.493
ENSSTOG00000007887 Ictidomys tridecemlineatus ENSSTOG00000007887 I 0.493
Brh_R005316 Buceros rhinoceros Brh_R005316 I 0.493
E2F7 Tupaia belangeri ENSTBEG00000005417 I 0.493
Alligator_sinensis_CCG013028.2 Alligator sinensis Alligator_sinensis_CCG013028.2 I 0.493
Alligator_sinensis_CCG013467.1 Alligator sinensis Alligator_sinensis_CCG013467.1 I 0.493
Cmyd_10011734 Chelonia mydas Cmyd_10011734 I 0.493
E2F7 Tursiops truncatus ENSTTRG00000000110 I 0.493
E2F7 Gorilla gorilla ENSGGOG00000012645 I 0.493
ENSAMEG00000007247 Ailuropoda melanoleuca ENSAMEG00000007247 I 0.493
ENSGALG00000004023 Gallus gallus ENSGALG00000004023 I 0.493
ENSGMOG00000019253 Gadus morhua ENSGMOG00000019253 I 0.493
ENSAMEG00000017950 Ailuropoda melanoleuca ENSAMEG00000017950 I 0.493
ENSAPLG00000014506 Anas platyrhynchos ENSAPLG00000014506 I 0.493
E2F7 Dasypus novemcinctus ENSDNOG00000001580 I 0.493
E2F7 Loxodonta africana ENSLAFG00000017902 I 0.493
E2F7 Homo sapiens ENSG00000165891 D 0.493
E2F7 Felis catus ENSFCAG00000010756 I 0.493
ENSECAG00000017963 Equus caballus ENSECAG00000017963 I 0.493
ENSCSAG00000003998 Chlorocebus sabaeus ENSCSAG00000003998 I 0.493
ENSDORG00000003404 Dipodomys ordii ENSDORG00000003404 I 0.493
E2F8 Erinaceus europaeus ENSEEUG00000011472 I 0.493
E2F7 Cavia porcellus ENSCPOG00000007375 I 0.493
E2F8 Felis catus ENSFCAG00000010706 I 0.493
ENSFALG00000010433 Ficedula albicollis ENSFALG00000010433 I 0.493
E2F7 Bos taurus ENSBTAG00000016931 I 0.493
ENSMEUG00000008461 Macropus eugenii ENSMEUG00000008461 I 0.493
ENSMPUG00000013899 Mustela putorius furo ENSMPUG00000013899 I 0.493
E2F7 Monodelphis domestica ENSMODG00000020465 I 0.493
E2F7 Myotis lucifugus ENSMLUG00000012116 I 0.493
E2F7 Callithrix jacchus ENSCJAG00000019162 I 0.493
ENSMPUG00000017468 Mustela putorius furo ENSMPUG00000017468 I 0.493
E2F8 Ornithorhynchus anatinus ENSOANG00000011290 I 0.493
ENSNLEG00000004897 Nomascus leucogenys ENSNLEG00000004897 I 0.493
E2f7 Mus musculus ENSMUSG00000020185 D 0.493
E2F7 Oryctolagus cuniculus ENSOCUG00000004932 I 0.493
E2F8 Monodelphis domestica ENSMODG00000009029 I 0.493
E2F7 Macaca mulatta ENSMMUG00000022846 I 0.493
E2F8 Macaca mulatta ENSMMUG00000010853 I 0.493
E2F8 Canis familiaris ENSCAFG00000009431 I 0.493
E2F8 Callithrix jacchus ENSCJAG00000006811 I 0.493
ENSOARG00000014941 Ovis aries ENSOARG00000014941 I 0.489
e2f7 Xenopus tropicalis XB-GENE-1018445 I 0.485
E2F8 Bos taurus ENSBTAG00000017446 I 0.485
ENSAPLG00000009091 Anas platyrhynchos ENSAPLG00000009091 I 0.485
gw1.8.144.1 Ostreococcus RCC809 gw1.8.144.1 I 0.485
Cmyd_10016427 Chelonia mydas Cmyd_10016427 I 0.485
fgenesh2_pg.scaffold_132000019 Physcomitrella patens fgenesh2_pg.scaffold_132000019 I 0.485
E2F7 Canis familiaris ENSCAFG00000005718 I 0.485
ENSBTAP00000023190-D1 Bos grunniens ENSBTAP00000023190-D1 I 0.485
ENSXMAG00000006252 Xiphophorus maculatus ENSXMAG00000006252 I 0.485
ENSLACG00000016113 Latimeria chalumnae ENSLACG00000016113 I 0.485
ENSGALG00000010265 Gallus gallus ENSGALG00000010265 I 0.485
e2f7 Gasterosteus aculeatus ENSGACG00000019468 I 0.485
E2F7 Echinops telfairi ENSETEG00000014750 I 0.485
ENSTSYG00000008243 Tarsius syrichta ENSTSYG00000008243 I 0.485
E2F8 Meleagris gallopavo ENSMGAG00000002303 I 0.485
E2F8 Equus caballus ENSECAG00000016457 I 0.485
ENSORLG00000012301 Oryzias latipes ENSORLG00000012301 I 0.485
E2F7 Meleagris gallopavo ENSMGAG00000010943 I 0.485
ENSPFOG00000003272 Poecilia formosa ENSPFOG00000003272 I 0.485
ENSPSIG00000008707 Pelodiscus sinensis ENSPSIG00000008707 I 0.485
ENSFALG00000001625 Ficedula albicollis ENSFALG00000001625 I 0.478
E2F8 Taeniopygia guttata ENSTGUG00000015857 I 0.478
LotgiG168338 Lottia gigantea LotgiG168338 I 0.478
ENSLACG00000014031 Latimeria chalumnae ENSLACG00000014031 I 0.478
CMT433C Cyanidioschyzon merolae CMT433C I 0.478
Gfo_R003950 Geospiza fortis Gfo_R003950 I 0.478
e2f8.L Xenopus laevis XB-GENE-1219153 I 0.478
e2f7.L Xenopus laevis XB-GENE-1018449 I 0.478
E2F8 Procavia capensis ENSPCAG00000003996 I 0.473
SPU_023346 Strongylocentrotus purpuratus SPU_023346 I 0.471
ENSPMAG00000001858 Petromyzon marinus ENSPMAG00000001858 I 0.471
XP_002942881 Xenopus tropicalis XP_002942881 I 0.471
CGI_10023548 Crassostrea gigas CGI_10023548 I 0.471
GRMZM2G378665 Zea mays GRMZM2G378665 I 0.471
ENSPMAG00000007204 Petromyzon marinus ENSPMAG00000007204 I 0.468
Pavir.Da01202 Panicum virgatum Pavir.Da01202 I 0.464
OPUNC06G08860 Oryza punctata OPUNC06G08860 I 0.463
F775_15908 Aegilops tauschii F775_15908 I 0.463
MLOC_67050 Hordeum vulgare MLOC_67050 I 0.463
30147.m014015 Ricinus communis 30147.m014015 I 0.463
Traes_7BS_CCA195724 Triticum aestivum Traes_7BS_CCA195724 I 0.463
BGIOSGA022619 Oryza indica BGIOSGA022619 I 0.457
Si006412m.g Setaria italica Si006412m.g I 0.456
SELMODRAFT_451530 Selaginella moellendorffii SELMODRAFT_451530 I 0.456
SELMODRAFT_421405 Selaginella moellendorffii SELMODRAFT_421405 I 0.456
Sb04g028440 Sorghum bicolor Sb04g028440 I 0.456
Lus10032439.g Linum usitatissimum Lus10032439.g I 0.456
CapteG198117 Capitella teleta CapteG198117 I 0.456
BRADI1G44520 Brachypodium distachyon BRADI1G44520 I 0.456
cassava23001.valid.m1 Manihot esculenta cassava23001.valid.m1 I 0.456
Aqu1.219226 Amphimedon queenslandica Aqu1.219226 I 0.456
Aquca_025_00187 Aquilegia coerulea Aquca_025_00187 I 0.456
Ocbimv22037571m.g Octopus bimaculoides Ocbimv22037571m.g I 0.456
Gorai.004G114000 Gossypium raimondii Gorai.004G114000 I 0.456
PDK_20s1335201g002 Phoenix dactylifera PDK_20s1335201g002 I 0.456
Lus10042941.g Linum usitatissimum Lus10042941.g I 0.456
ORUFI06G09470 Oryza rufipogon ORUFI06G09470 I 0.456
OGLUM06G09840 Oryza glumaepatula OGLUM06G09840 I 0.456
ONIVA06G10700 Oryza nivara ONIVA06G10700 I 0.456
ORGLA06G0087600 Oryza glaberrima ORGLA06G0087600 I 0.456
OBART06G09260 Oryza barthii OBART06G09260 I 0.456
HelroG187766 Helobdella robusta HelroG187766 I 0.456
E2F7 Sus scrofa ENSSSCG00000000950 I 0.456
GRMZM2G361659 Zea mays GRMZM2G361659 I 0.456
OS06G0245900 Oryza sativa OS06G0245900 I 0.456
LPERR06G08240 Leersia perrieri LPERR06G08240 I 0.456
OSTLU_42726 Ostreococcus lucimarinus OSTLU_42726 I 0.456
fgenesh_scip_prom.28083.1342 Phytophthora lateralis fgenesh_scip_prom.28083.1342 I 0.454
Eucgr.I01881 Eucalyptus grandis Eucgr.I01881 I 0.449
GLYMA17G10130 Glycine max GLYMA17G10130 I 0.449
Si019635m.g Setaria italica Si019635m.g I 0.449
GRMZM2G060000 Zea mays GRMZM2G060000 I 0.449
Sb10g008800 Sorghum bicolor Sb10g008800 I 0.449
cassava17583.valid.m1 Manihot esculenta cassava17583.valid.m1 I 0.449
ISCW021939 Ixodes scapularis ISCW021939 I 0.449
GLYMA05G01760 Glycine max GLYMA05G01760 I 0.449
GLYMA06G19843 Glycine max GLYMA06G19843 I 0.449
Pavir.Db01700 Panicum virgatum Pavir.Db01700 I 0.449
chr4.LjT30K03.50.nc Lotus japonicus chr4.LjT30K03.50.nc I 0.449
TCM_011971 Theobroma cacao TCM_011971 I 0.448
TRIUR3_19744 Triticum urartu TRIUR3_19744 I 0.448
ALNC14_032570 Albugo laibachii ALNC14_032570 I 0.441
LPERR02G26130 Leersia perrieri LPERR02G26130 I 0.441
E2FE Arabidopsis thaliana AT3G48160 D 0.441
Bostr.18473s0137 Boechera stricta Bostr.18473s0137 I 0.441
Aqu1.202157 Amphimedon queenslandica Aqu1.202157 I 0.441
Thhalv10010430m.g Eutrema salsugineum Thhalv10010430m.g I 0.441
Bo8g076700 Brassica oleracea Bo8g076700 I 0.441
F775_06335 Aegilops tauschii F775_06335 I 0.441
BGIOSGA005653 Oryza indica BGIOSGA005653 I 0.441
ONIVA06G05110 Oryza nivara ONIVA06G05110 I 0.441
OMERI02G30620 Oryza meridionalis OMERI02G30620 I 0.441
OPUNC02G29630 Oryza punctata OPUNC02G29630 I 0.441
ORGLA02G0274600 Oryza glaberrima ORGLA02G0274600 I 0.441
OS02G0739700 Oryza sativa OS02G0739700 I 0.441
ORUFI02G33610 Oryza rufipogon ORUFI02G33610 I 0.441
OBART02G31930 Oryza barthii OBART02G31930 I 0.441
OLONG_014374 Oryza longistaminata OLONG_014374 I 0.441
BRADI3G59740 Brachypodium distachyon BRADI3G59740 I 0.436
PK00080.1 Cannabis sativa PK00080.1 I 0.434
DEL1 Arabidopsis lyrata fgenesh2_kg.5__1169__AT3G48160.2 I 0.434
Thhalv10021032m.g Eutrema salsugineum Thhalv10021032m.g I 0.434
SapurV1A.0161s0320 Salix purpurea SapurV1A.0161s0320 I 0.434
Bo1g074680 Brassica oleracea Bo1g074680 I 0.434
Bra033767 Brassica rapa Bra033767 I 0.434
Bo5g155250 Brassica oleracea Bo5g155250 I 0.434
F443_02115 Phytophthora parasitica F443_02115 I 0.434
POPTR_0015s08160 Populus trichocarpa POPTR_0015s08160 I 0.434
XP_002164164.1 Hydra magnipapillata XP_002164164.1 I 0.434
e_gw1.178.5.1 Phytophthora capsici e_gw1.178.5.1 I 0.434
VIT_14s0066g02370 Vitis vinifera VIT_14s0066g02370 I 0.434
DEL1 Vitis vinifera VIT_17s0000g07630 I 0.434
chr1.CM1956.640.nc Lotus japonicus chr1.CM1956.640.nc I 0.434
L798_00191 Zootermopsis nevadensis L798_00191 I 0.434
Bra039127 Brassica rapa Bra039127 I 0.434
Physo156920 Phytophthora sojae Physo156920 I 0.434
OB02G38920 Oryza brachyantha OB02G38920 I 0.434
Cucsa.098190 Cucumis sativus Cucsa.098190 I 0.434
GSMUA_Achr7G02220_001 Musa acuminata GSMUA_Achr7G02220_001 I 0.434
MTR_4g106540 Medicago truncatula MTR_4g106540 I 0.434
maker-pve_contig_484-snap-gene-0.19 Pythium vexans maker-pve_contig_484-snap-gene-0.19 I 0.434
PGSC0003DMG402024469 Solanum tuberosum PGSC0003DMG402024469 I 0.434
maker-pag1_scaffold_45-snap-gene-0.28 Pythium aphanidermatum maker-pag1_scaffold_45-snap-gene-0.28 I 0.434
Cagra.4239s0004 Capsella grandiflora Cagra.4239s0004 I 0.434
OLONG_012839 Oryza longistaminata OLONG_012839 I 0.434
Bra018080 Brassica rapa Bra018080 I 0.434
Lus10039455.g Linum usitatissimum Lus10039455.g I 0.434
Carubv10018365m.g Capsella rubella Carubv10018365m.g I 0.434
Solyc03g113760.2 Solanum lycopersicum Solyc03g113760.2 I 0.434
E2F8 Vicugna pacos ENSVPAG00000012423 I 0.433
Traes_6DL_90C72AE92 Triticum aestivum Traes_6DL_90C72AE92 I 0.429
Contig14878.0.g72 Oxytricha trifallax Contig14878.0.g72 I 0.429
Contig13804.0.g1 Oxytricha trifallax Contig13804.0.g1 I 0.429