CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genemark1.C_10169
(
Coccomyxa subellipsoidea C169
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02319 (E2F_TDP)
IPR003316
estExt_Genemark1.C_10169
T173919_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TFDP1
M08108_2.00
Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA1122.1
0.838
0.838
TFDP1
M09035_2.00
Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB
Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C
0.838
0.838
dpl-1
M09525_2.00
Caenorhabditis elegans
GCGCGYHW
WDRCGCGC
Misc
Heinz et al.(2010)
cElegans-Adult_modEncode
0.750
0.750
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
64119
E2F
191
273
NGKGLRHFSMKVCEKVESKGRTTYNEVADELVQEFSAPSLQAGSPGGAAYDEKNIRRRVYDALNVLMAMDIITKDKKEISWQG
Links
Other
E2F
family TFs
Other
Coccomyxa subellipsoidea C169
TFs
576 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy