gene18382-v1.0-hybrid (Fragaria vesca)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 gene18382-v1.0-hybrid T173943_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
dpl-1
M09525_2.00
Caenorhabditis elegans
GCGCGYHW

WDRCGCGC
Misc
Heinz et al.(2010)
cElegans-Adult_modEncode
0.662 0.662
TFDP1
M08108_2.00
Homo sapiens
NSGCGGGAAVN

NBTTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA1122.1
0.647 0.647
TFDP1
M09035_2.00
Homo sapiens
VRDDGGCGGGAMDN

NHKTCCCGCCHHYB
Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C
0.647 0.647
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna18382.1-v1.0-hybrid E2F 60 140

Links

Other E2F family TFs
Other Fragaria vesca TFs

532 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action