Pavir.J03431 (Panicum virgatum)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 Pavir.J03431 T174003_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TFDP1
M08108_2.00
Homo sapiens
NSGCGGGAAVN

NBTTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA1122.1
0.588 0.588
TFDP1
M09035_2.00
Homo sapiens
VRDDGGCGGGAMDN

NHKTCCCGCCHHYB
Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C
0.588 0.588
dpl-1
M09525_2.00
Caenorhabditis elegans
GCGCGYHW

WDRCGCGC
Misc
Heinz et al.(2010)
cElegans-Adult_modEncode
0.574 0.574
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J03431.1.p E2F 67 143

Links

Other E2F family TFs
Other Panicum virgatum TFs

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516 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action