CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L898_g3621
(
Steinernema monticolum
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02319 (E2F_TDP)
IPR003316
L898_g3621
T174320_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
E2F7
M02960_2.00
Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW
SELEX
Jolma et al.(2013)
E2F7_1
0.430
0.430
E2F7
M04705_2.00
Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX
0.430
0.430
E2F7
M09033_2.00
Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B
0.430
0.430
E2f7
M09040_2.00
Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C
0.430
0.430
E2F7
M09522_2.00
Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN
Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673
0.430
0.430
E2F7
M04706_2.00
Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX
0.430
0.430
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L898_g3621.t1
E2F
1
52
MQEEENKGHDIHLETVAKSMNVEKRRIYDIVNVMEALDAMAKTNKSYYRWHG
L898_g3621.t1
E2F
147
229
GQNSLANLCRRFLMVLLCNPNAGRKVSLDVASTVLIKDPETEGFEPPSRSRCRRLYDIANVLVAMNLIKKVHYLFGTKKIPLF
Links
Other
E2F
family TFs
Other
Steinernema monticolum
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L892_g1818
Steinernema scapterisci
L892_g1818
I
0.860
L889_g28422
Steinernema feltiae
L889_g28422
I
0.851
HCOI01892600
Haemonchus contortus
HCOI01892600
I
0.826
DICVIV_01764
Dictyocaulus viviparus
DICVIV_01764
I
0.818
SMUV_0000434101
Syphacia muris
SMUV_0000434101
I
0.810
CGOC_0000227901
Cylicostephanus goldi
CGOC_0000227901
N
0.802
CJA26768
Caenorhabditis japonica
CJA26768
I
0.802
TCNE_0000873901
Toxocara canis
TCNE_0000873901
I
0.793
L893_g19965
Steinernema glaseri
L893_g19965
I
0.780
HPBE_0000610601
Heligmosomoides bakeri
HPBE_0000610601
I
0.777
ACAC_0000024001
Angiostrongylus cantonensis
ACAC_0000024001
I
0.769
L596_g12895
Steinernema carpocapsae
L596_g12895
I
0.757
ASU_04096
Ascaris suum
ASU_04096
I
0.752
ALUE_0000773501
Ascaris lumbricoides
ALUE_0000773501
I
0.752
scaffold51-EXSNAP2012.35
Pristionchus exspectatus
scaffold51-EXSNAP2012.35
I
0.752
scaffold884-EXSNAP2012.1
Pristionchus exspectatus
scaffold884-EXSNAP2012.1
I
0.744
TELCIR_03927
Teladorsagia circumcincta
TELCIR_03927
I
0.733
Minc04041
Meloidogyne incognita
Minc04041
I
0.727
MhA1_Contig130.frz3.gene44
Meloidogyne hapla
MhA1_Contig130.frz3.gene44
I
0.727
maker-nMf.1.1.scaf01659-augustus-gene-0.9
Meloidogyne floridensis
maker-nMf.1.1.scaf01659-augustus-gene-0.9
I
0.727
Minc05731
Meloidogyne incognita
Minc05731
I
0.727
efl-3
Caenorhabditis elegans
WBGene00009899
I
0.724
CBN23380
Caenorhabditis brenneri
CBN23380
I
0.719
CBG00680
Caenorhabditis briggsae
CBG00680
I
0.719
CRE01589
Caenorhabditis remanei
CRE01589
I
0.719
ANCCAN_04600
Ancylostoma caninum
ANCCAN_04600
I
0.696
ASIM_0001001801
Anisakis simplex
ASIM_0001001801
I
0.689
PPA21298
Pristionchus pacificus
PPA21298
I
0.679
augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0
I
0.658
OESDEN_13289
Oesophagostomum dentatum
OESDEN_13289
I
0.652
OESDEN_14635
Oesophagostomum dentatum
OESDEN_14635
I
0.644
BXY_1693900
Bursaphelenchus xylophilus
BXY_1693900
I
0.610
EVEC_0001263301
Enterobius vermicularis
EVEC_0001263301
N
0.603
WUBG_01805
Wuchereria bancrofti
WUBG_01805
N
0.603
LOAG_07147
Loa loa
LOAG_07147
N
0.595
nOo.2.0.1.g06441
Onchocerca ochengi
nOo.2.0.1.g06441
N
0.587
WBGene00247952
Onchocerca volvulus
WBGene00247952
N
0.587
Bm4234
Brugia malayi
Bm4234
N
0.587
SVUK_0001371201
Strongylus vulgaris
SVUK_0001371201
I
0.582
NECAME_17546
Necator americanus
NECAME_17546
N
0.554
nLs.2.1.2.g03748
Litomosoides sigmodontis
nLs.2.1.2.g03748
N
0.538
OFLC_0000212001
Onchocerca flexuosa
OFLC_0000212001
N
0.526
nDi.2.2.2.g08162
Dirofilaria immitis
nDi.2.2.2.g08162
N
0.526
TCLT_0000737401
Thelazia callipaeda
TCLT_0000737401
N
0.496
DME_0000727201
Dracunculus medinensis
DME_0000727201
I
0.471
TELCIR_22846
Teladorsagia circumcincta
TELCIR_22846
I
0.455
ENSLOCG00000016279
Lepisosteus oculatus
ENSLOCG00000016279
I
0.438
E2F7
Oryctolagus cuniculus
ENSOCUG00000004932
I
0.430
E2F7
Bos taurus
ENSBTAG00000016931
I
0.430
Pvit_10252
Pogona vitticeps
Pvit_10252
I
0.430
E2F7
Monodelphis domestica
ENSMODG00000020465
I
0.430
ENSSHAG00000002919
Sarcophilus harrisii
ENSSHAG00000002919
I
0.430
E2F7
Dasypus novemcinctus
ENSDNOG00000001580
I
0.430
ENSBTAP00000022518-D1
Bos grunniens
ENSBTAP00000022518-D1
I
0.430
ENSMEUG00000008461
Macropus eugenii
ENSMEUG00000008461
I
0.430
E2F7
Loxodonta africana
ENSLAFG00000017902
I
0.430
E2F7
Vicugna pacos
ENSVPAG00000011151
I
0.430