L898_g3621 (Steinernema monticolum)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 L898_g3621 T174320_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
E2F7
M02960_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Jolma et al.(2013)
E2F7_1 		0.430 0.430
E2F7
M04705_2.00 		Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX 		0.430 0.430
E2F7
M09033_2.00 		Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B 		0.430 0.430
E2f7
M09040_2.00 		Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C 		0.430 0.430
E2F7
M09522_2.00 		Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN		 Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673 		0.430 0.430
E2F7
M04706_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX 		0.430 0.430
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g3621.t1 E2F 1 52
L898_g3621.t1 E2F 147 229

Links

Other E2F family TFs
Other Steinernema monticolum TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L892_g1818 Steinernema scapterisci L892_g1818 I 0.860
L889_g28422 Steinernema feltiae L889_g28422 I 0.851
HCOI01892600 Haemonchus contortus HCOI01892600 I 0.826
DICVIV_01764 Dictyocaulus viviparus DICVIV_01764 I 0.818
SMUV_0000434101 Syphacia muris SMUV_0000434101 I 0.810
CGOC_0000227901 Cylicostephanus goldi CGOC_0000227901 N 0.802
CJA26768 Caenorhabditis japonica CJA26768 I 0.802
TCNE_0000873901 Toxocara canis TCNE_0000873901 I 0.793
L893_g19965 Steinernema glaseri L893_g19965 I 0.780
HPBE_0000610601 Heligmosomoides bakeri HPBE_0000610601 I 0.777
ACAC_0000024001 Angiostrongylus cantonensis ACAC_0000024001 I 0.769
L596_g12895 Steinernema carpocapsae L596_g12895 I 0.757
ASU_04096 Ascaris suum ASU_04096 I 0.752
ALUE_0000773501 Ascaris lumbricoides ALUE_0000773501 I 0.752
scaffold51-EXSNAP2012.35 Pristionchus exspectatus scaffold51-EXSNAP2012.35 I 0.752
scaffold884-EXSNAP2012.1 Pristionchus exspectatus scaffold884-EXSNAP2012.1 I 0.744
TELCIR_03927 Teladorsagia circumcincta TELCIR_03927 I 0.733
Minc04041 Meloidogyne incognita Minc04041 I 0.727
MhA1_Contig130.frz3.gene44 Meloidogyne hapla MhA1_Contig130.frz3.gene44 I 0.727
maker-nMf.1.1.scaf01659-augustus-gene-0.9 Meloidogyne floridensis maker-nMf.1.1.scaf01659-augustus-gene-0.9 I 0.727
Minc05731 Meloidogyne incognita Minc05731 I 0.727
efl-3 Caenorhabditis elegans WBGene00009899 I 0.724
CBN23380 Caenorhabditis brenneri CBN23380 I 0.719
CBG00680 Caenorhabditis briggsae CBG00680 I 0.719
CRE01589 Caenorhabditis remanei CRE01589 I 0.719
ANCCAN_04600 Ancylostoma caninum ANCCAN_04600 I 0.696
ASIM_0001001801 Anisakis simplex ASIM_0001001801 I 0.689
PPA21298 Pristionchus pacificus PPA21298 I 0.679
augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 I 0.658
OESDEN_13289 Oesophagostomum dentatum OESDEN_13289 I 0.652
OESDEN_14635 Oesophagostomum dentatum OESDEN_14635 I 0.644
BXY_1693900 Bursaphelenchus xylophilus BXY_1693900 I 0.610
EVEC_0001263301 Enterobius vermicularis EVEC_0001263301 N 0.603
WUBG_01805 Wuchereria bancrofti WUBG_01805 N 0.603
LOAG_07147 Loa loa LOAG_07147 N 0.595
nOo.2.0.1.g06441 Onchocerca ochengi nOo.2.0.1.g06441 N 0.587
WBGene00247952 Onchocerca volvulus WBGene00247952 N 0.587
Bm4234 Brugia malayi Bm4234 N 0.587
SVUK_0001371201 Strongylus vulgaris SVUK_0001371201 I 0.582
NECAME_17546 Necator americanus NECAME_17546 N 0.554
nLs.2.1.2.g03748 Litomosoides sigmodontis nLs.2.1.2.g03748 N 0.538
OFLC_0000212001 Onchocerca flexuosa OFLC_0000212001 N 0.526
nDi.2.2.2.g08162 Dirofilaria immitis nDi.2.2.2.g08162 N 0.526
TCLT_0000737401 Thelazia callipaeda TCLT_0000737401 N 0.496
DME_0000727201 Dracunculus medinensis DME_0000727201 I 0.471
TELCIR_22846 Teladorsagia circumcincta TELCIR_22846 I 0.455
ENSLOCG00000016279 Lepisosteus oculatus ENSLOCG00000016279 I 0.438
E2F7 Oryctolagus cuniculus ENSOCUG00000004932 I 0.430
E2F7 Bos taurus ENSBTAG00000016931 I 0.430
Pvit_10252 Pogona vitticeps Pvit_10252 I 0.430
E2F7 Monodelphis domestica ENSMODG00000020465 I 0.430
ENSSHAG00000002919 Sarcophilus harrisii ENSSHAG00000002919 I 0.430
E2F7 Dasypus novemcinctus ENSDNOG00000001580 I 0.430
ENSBTAP00000022518-D1 Bos grunniens ENSBTAP00000022518-D1 I 0.430
ENSMEUG00000008461 Macropus eugenii ENSMEUG00000008461 I 0.430
E2F7 Loxodonta africana ENSLAFG00000017902 I 0.430
E2F7 Vicugna pacos ENSVPAG00000011151 I 0.430