PEQ_0000364301 (Parascaris equorum)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 PEQ_0000364301 T174366_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
E2F4
M02961_2.00
Homo sapiens
AATGGCGCCAAA

TTTGGCGCCATT
SELEX
Jolma et al.(2013)
E2F4_1
0.500 0.500
E2F4
M02962_2.00
Homo sapiens
TTTGGCGCCAAA

TTTGGCGCCAAA
SELEX
Jolma et al.(2013)
E2F4_2
0.500 0.500
E2F4
M04707_2.00
Homo sapiens
NWWKGGCGCCAAAW

WTTTGGCGCCMWWN
SELEX
Yin et al.(2017)
E2F4_eDBD_HT-SELEX
0.500 0.500
efl-1
M08110_2.00
Caenorhabditis elegans
HNHNSGCGSSAAWWN

NWWTTSSCGCSNDND
ChIP-seq
Mathelier et al.(2014)
MA0541.1
0.500 0.500
E2F4
M08109_2.00
Homo sapiens
NSGCGGGARVN

NBYTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA0470.1
0.500 0.500
E2F4
M07942_2.00
Homo sapiens
SGCGSGARDNNBNVN

NBNVNNHYTCSCGCS
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F4_UCD
0.500 0.500
E2F4
M07943_2.00
Homo sapiens
SGCGGGARDNNBVVN

NBBVNNHYTCCCGCS
ChIP-seq
Gerstein et al.(2012)
K562b_E2F4_UCD
0.500 0.500
efl-1
M08197_2.00
Caenorhabditis elegans
BGCGSSAAWW

WWTTSSCGCV
ChIP-seq
Contrino et al.(2012)
Mw140
0.500 0.500
E2F4
M09036_2.00
Homo sapiens
VDRGGCGGGRVND

HNBYCCCGCCYHB
Misc
Kulakovskiy et al.(2013)
E2F4_HUMAN.H11MO.0.A
0.500 0.500
E2f4
M09037_2.00
Mus musculus
NRDDGGCGGGRMNN

NNKYCCCGCCHHYN
Misc
Kulakovskiy et al.(2013)
E2F4_MOUSE.H11MO.0.A
0.500 0.500
E2f5
M09042_2.00
Mus musculus
NGCGCSAAAN

NTTTSGCGCN
Misc
Kulakovskiy et al.(2013)
E2F5_MOUSE.H11MO.0.B
0.500 0.500
efl-1
M09526_2.00
Caenorhabditis elegans
WGCAARYGCGCTCYA

TRGAGCGCRYTTGCW
Misc
Heinz et al.(2010)
cElegans-L1-EFL1_modEncode
0.500 0.500
E2F4
M09524_2.00
Homo sapiens
VGCGSGAADH

DHTTCSCGCB
Misc
Heinz et al.(2010)
K562-E2F4_GSE31477
0.500 0.500
E2F4
M10457_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_05
0.500 0.500
E2F4
M10458_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_Q3
0.500 0.500
E2F4
M10459_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_Q6
0.500 0.500
E2F1
M02952_2.00
Homo sapiens
WWDGGCGCCAAW

WTTGGCGCCHWW
SELEX
Jolma et al.(2013)
E2F1_1
0.469 0.469
E2F1
M02953_2.00
Homo sapiens
WWKGGCGCCWWW

WWWGGCGCCMWW
SELEX
Jolma et al.(2013)
E2F1_2
0.469 0.469
E2F1
M02954_2.00
Homo sapiens
WWWKGGCGCCMWWW

WWWKGGCGCCMWWW
SELEX
Jolma et al.(2013)
E2F1_3
0.469 0.469
E2F1
M02955_2.00
Homo sapiens
AAWKGGCGCCAWTW

WAWTGGCGCCMWTT
SELEX
Jolma et al.(2013)
E2F1_4
0.469 0.469
E2F1
M04700_2.00
Homo sapiens
NWWWDGGCGCCAAAWH

DWTTTGGCGCCHWWWN
SELEX
Yin et al.(2017)
E2F1_FL_HT-SELEX
0.469 0.469
E2F1
M07938_2.00
Homo sapiens
VRRVNRVGCGSGMDS

SHKCSCGCBYNBYYB
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F1_UCD
0.469 0.469
E2f
M08196_2.00
Drosophila melanogaster
AAWWBSSCGSCAA

TTGSCGSSVWWTT
ChIP-seq
Contrino et al.(2012)
Mf10
0.469 0.469
E2F1
M09030_2.00
Homo sapiens
NVNDGGCGGGARVN

NBYTCCCGCCHNBN
Misc
Kulakovskiy et al.(2013)
E2F1_HUMAN.H11MO.0.A
0.469 0.469
E2f1
M09041_2.00
Mus musculus
NDDGGCGGGRVN

NBYCCCGCCHHN
Misc
Kulakovskiy et al.(2013)
E2F1_MOUSE.H11MO.0.A
0.469 0.469
E2F1
M09521_2.00
Homo sapiens
NNGGCGGGAA

TTCCCGCCNN
Misc
Heinz et al.(2010)
Hela-E2F1_GSE22478
0.469 0.469
E2F1
M10444_2.00
Homo sapiens
THVGCGCGAAAAHKR

YMDTTTTCGCGCBDA
Transfac
Matys et al.(2006)
V$E2F_01
0.469 0.469
E2F1
M10445_2.00
Homo sapiens
BHKSGCGCSAAA

TTTSGCGCSMDV
Transfac
Matys et al.(2006)
V$E2F_03
0.469 0.469
E2F1
M10446_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_01
0.469 0.469
E2F1
M10447_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_02
0.469 0.469
E2F1
M10448_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3_01
0.469 0.469
E2F1
M10449_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3
0.469 0.469
E2F1
M10450_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_01
0.469 0.469
E2F1
M10451_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_02
0.469 0.469
E2F1
M10452_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4
0.469 0.469
E2F1
M10453_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q6
0.469 0.469
E2F2
M01963_2.00
Tupaia belangeri
WDVGCGCBHW

WDVGCGCBHW
PBM
Weirauch et al.(2014)
pTH9291
0.438 0.438
efl-2
M01966_2.00
Caenorhabditis elegans
NDBGCGSBNN

NNVSCGCVHN
PBM
Weirauch et al.(2014)
pTH5916
0.438 0.438
efl-2
M00662_2.00
Caenorhabditis elegans
NSGCGSNNDN

NHNNSCGCSN
PBM
Narasimhan et al.(2015)
pTH9173
0.438 0.438
E2FC
M06870_2.00
Arabidopsis thaliana
AWDDDGGCGCCAAAR

YTTTGGCGCCHHHWT
Dap-seq
OMalley et al.(2016)
E2FC_col_a
0.438 0.438
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PEQ_0000364301-mRNA-1 E2F 56 92

Links

Other E2F family TFs
Other Parascaris equorum TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
E2f4 Mus musculus ENSMUSG00000014859 D 0.500
efl-2 Caenorhabditis elegans WBGene00001162 D 0.438
E2f Drosophila melanogaster FBgn0011766 D 0.469
E2F4 Homo sapiens ENSG00000205250 D 0.500
OPUNC12G03430 Oryza punctata OPUNC12G03430 I 0.531
ORGLA04G0006000 Oryza glaberrima ORGLA04G0006000 I 0.438
ORGLA12G0034600 Oryza glaberrima ORGLA12G0034600 I 0.531
ORUFI04G00690 Oryza rufipogon ORUFI04G00690 I 0.438
ORUFI12G04170 Oryza rufipogon ORUFI12G04170 I 0.531
LPERR04G00320 Leersia perrieri LPERR04G00320 I 0.438
OS04G0112200 Oryza sativa OS04G0112200 I 0.438
OS12G0158800 Oryza sativa OS12G0158800 I 0.531
PITG_01579 Phytophthora infestans PITG_01579 I 0.500
POPTR_0004s21100 Populus trichocarpa POPTR_0004s21100 I 0.438
RPRC007256 Rhodnius prolixus RPRC007256 I 0.562
Sb06g000890 Sorghum bicolor Sb06g000890 I 0.438
OPUNC04G00710 Oryza punctata OPUNC04G00710 I 0.438
ONIVA12G03230 Oryza nivara ONIVA12G03230 I 0.531
LPERR12G03370 Leersia perrieri LPERR12G03370 I 0.531
ML14475a Mnemiopsis leidyi ML14475a I 0.531
MTR_4g052000 Medicago truncatula MTR_4g052000 I 0.438
OB06G18550 Oryza brachyantha OB06G18550 I 0.438
OB12G13530 Oryza brachyantha OB12G13530 I 0.531
OBART04G00680 Oryza barthii OBART04G00680 I 0.438
OBART12G03570 Oryza barthii OBART12G03570 I 0.531
OGLUM04G00590 Oryza glumaepatula OGLUM04G00590 I 0.438
OGLUM12G04270 Oryza glumaepatula OGLUM12G04270 I 0.531
OLONG_000194 Oryza longistaminata OLONG_000194 I 0.531
OLONG_026747 Oryza longistaminata OLONG_026747 I 0.438
OMERI04G00620 Oryza meridionalis OMERI04G00620 I 0.438
OMERI12G01820 Oryza meridionalis OMERI12G01820 I 0.531
ONIVA10G05260 Oryza nivara ONIVA10G05260 I 0.438
Sb08g003670 Sorghum bicolor Sb08g003670 I 0.531
Si010044m.g Setaria italica Si010044m.g I 0.531
30170.m014171 Ricinus communis 30170.m014171 I 0.438
HHAL006519-PA Halyomorpha halys HHAL006519-PA I 0.500
estExt_fgenesh1_pg.C_1330005 Phytophthora capsici estExt_fgenesh1_pg.C_1330005 I 0.500
ASIM_0000970501 Anisakis simplex ASIM_0000970501 I 0.964
ASU_07245 Ascaris suum ASU_07245 I 0.431
D917_10139 Trichinella nativa D917_10139 I 0.625
L596_g3361 Steinernema carpocapsae L596_g3361 I 0.812
L889_g4761 Steinernema feltiae L889_g4761 I 0.812
L892_g31325 Steinernema scapterisci L892_g31325 I 0.812
L893_g15895 Steinernema glaseri L893_g15895 I 0.812
L898_g29355 Steinernema monticolum L898_g29355 I 0.812
nDi.2.2.2.g03085 Dirofilaria immitis nDi.2.2.2.g03085 I 0.657
PXEA_0001181501 Protopolystoma xenopodis PXEA_0001181501 I 0.438
SMTD_0001300001 Schistosoma mattheei SMTD_0001300001 I 0.531
SapurV1A.0125s0090 Salix purpurea SapurV1A.0125s0090 I 0.438
Pavir.J38646 Panicum virgatum Pavir.J38646 I 0.469
Traes_6AL_DD0E18465 Triticum aestivum Traes_6AL_DD0E18465 I 0.438
ENSP00000368686-D1 Bos grunniens ENSP00000368686-D1 I 0.500
Myotis_brandtii_E2f4_10015050 Myotis brandtii Myotis_brandtii_E2f4_10015050 I 0.500
Pvit_02135 Pogona vitticeps Pvit_02135 I 0.500
Pvit_05435 Pogona vitticeps Pvit_05435 I 0.469
Pvit_14741 Pogona vitticeps Pvit_14741 I 0.500
gw.680.60.1 Branchiostoma floridae gw.680.60.1 I 0.469
Aquca_072_00025 Aquilegia coerulea Aquca_072_00025 I 0.438
orange1.1g015878m.g Citrus sinensis orange1.1g015878m.g I 0.438
Pavir.Aa00738 Panicum virgatum Pavir.Aa00738 I 0.469
Pavir.Ca00172 Panicum virgatum Pavir.Ca00172 I 0.531
Pavir.J28624 Panicum virgatum Pavir.J28624 I 0.531
Pavir.J29330 Panicum virgatum Pavir.J29330 I 0.438
TCNE_0000648301 Toxocara canis TCNE_0000648301 I 0.431
AMSG_11596 Thecamonas trahens AMSG_11596 I 0.438
E2F4 Dasypus novemcinctus ENSDNOG00000041139 I 0.500
ENSDORG00000015131 Dipodomys ordii ENSDORG00000015131 I 0.500
E2F4 Equus caballus ENSECAG00000015595 I 0.500
E2F1 Erinaceus europaeus ENSEEUG00000009987 I 0.469
ENSFALG00000007077 Ficedula albicollis ENSFALG00000007077 I 0.500
ENSFALG00000010803 Ficedula albicollis ENSFALG00000010803 I 0.469
E2F4 Felis catus ENSFCAG00000009268 I 0.500
E2F4 Gallus gallus ENSGALG00000001722 I 0.500
E2F4 Gorilla gorilla ENSGGOG00000011924 I 0.500
ENSMEUG00000015656 Macropus eugenii ENSMEUG00000015656 I 0.438
E2F4 Meleagris gallopavo ENSMGAG00000002517 I 0.500
E2F4 Myotis lucifugus ENSMLUG00000023162 I 0.500
E2F4 Macaca mulatta ENSMMUG00000020258 I 0.500
e2f5 Danio rerio ENSDARG00000038812 I 0.500
ENSCSAG00000003814 Chlorocebus sabaeus ENSCSAG00000003814 I 0.500
BGIOSGA015708 Oryza indica BGIOSGA015708 I 0.438
BGIOSGA036595 Oryza indica BGIOSGA036595 I 0.531
Bo3g029900 Brassica oleracea Bo3g029900 I 0.438
BRADI5G01920 Brachypodium distachyon BRADI5G01920 I 0.438
CGI_10007193 Crassostrea gigas CGI_10007193 I 0.500
EFV59050 Trichinella spiralis EFV59050 I 0.625
ENSACAG00000000263 Anolis carolinensis ENSACAG00000000263 I 0.500
E2F4 Anolis carolinensis ENSACAG00000028484 I 0.500
ENSAMEG00000017275 Ailuropoda melanoleuca ENSAMEG00000017275 I 0.500
E2F4 Bos taurus ENSBTAG00000012063 I 0.500
E2F4 Canis familiaris ENSCAFG00000020375 I 0.500
E2F4 Callithrix jacchus ENSCJAG00000016403 I 0.500
E2F4 Cavia porcellus ENSCPOG00000010845 I 0.500
E2F4 Monodelphis domestica ENSMODG00000006150 I 0.500
ENSMPUG00000005564 Mustela putorius furo ENSMPUG00000005564 I 0.500
ENSNLEG00000002804 Nomascus leucogenys ENSNLEG00000002804 I 0.500
E2F1 Takifugu rubripes ENSTRUG00000011188 I 0.438
ENSTSYG00000007645 Tarsius syrichta ENSTSYG00000007645 I 0.500
ENSXMAG00000000446 Xiphophorus maculatus ENSXMAG00000000446 I 0.438
F443_00888 Phytophthora parasitica F443_00888 I 0.500
GG14417 Drosophila erecta FBgn0106676 I 0.469
GM11000 Drosophila sechellia FBgn0165945 I 0.469
GD19970 Drosophila simulans FBgn0191453 I 0.469
GE24969 Drosophila yakuba FBgn0242063 I 0.469
GLOINDRAFT_4310 Rhizophagus irregularis GLOINDRAFT_4310 I 0.469
GLYMA04G02720 Glycine max GLYMA04G02720 I 0.438
GRMZM2G052515 Zea mays GRMZM2G052515 I 0.531
GSMUA_Achr6G07100_001 Musa acuminata GSMUA_Achr6G07100_001 I 0.469
GSMUA_Achr6G18220_001 Musa acuminata GSMUA_Achr6G18220_001 I 0.500
e2f5 Takifugu rubripes ENSTRUG00000002354 I 0.500
E2F4 Taeniopygia guttata ENSTGUG00000005417 I 0.500
ENSNLEG00000004342 Nomascus leucogenys ENSNLEG00000004342 I 0.500
ENSOCUG00000010022 Oryctolagus cuniculus ENSOCUG00000010022 I 0.500
E2F4 Otolemur garnettii ENSOGAG00000000010 I 0.500
E2F4 Ochotona princeps ENSOPRG00000015165 I 0.500
ENSPANG00000016794 Papio anubis ENSPANG00000016794 I 0.500
E2F4 Procavia capensis ENSPCAG00000013266 I 0.500
ENSPPYG00000007445 Pongo abelii ENSPPYG00000007445 I 0.500
ENSPSIG00000015377 Pelodiscus sinensis ENSPSIG00000015377 I 0.469
E2F4 Pan troglodytes ENSPTRG00000031180 I 0.500
E2F4 Pteropus vampyrus ENSPVAG00000005274 I 0.500
E2f4 Rattus norvegicus ENSRNOG00000015708 I 0.500
E2F4 Sus scrofa ENSSSCG00000002787 I 0.500
ENSSTOG00000016434 Ictidomys tridecemlineatus ENSSTOG00000016434 I 0.500
LotgiG171492 Lottia gigantea LotgiG171492 I 0.469
PDK_20s1507381g001 Phoenix dactylifera PDK_20s1507381g001 N 0.438