PEQ_0000364301 (Parascaris equorum)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 PEQ_0000364301 T174366_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
E2F4
M02961_2.00
Homo sapiens
AATGGCGCCAAA

TTTGGCGCCATT
SELEX
Jolma et al.(2013)
E2F4_1
0.500 0.500
E2F4
M02962_2.00
Homo sapiens
TTTGGCGCCAAA

TTTGGCGCCAAA
SELEX
Jolma et al.(2013)
E2F4_2
0.500 0.500
E2F4
M04707_2.00
Homo sapiens
NWWKGGCGCCAAAW

WTTTGGCGCCMWWN
SELEX
Yin et al.(2017)
E2F4_eDBD_HT-SELEX
0.500 0.500
efl-1
M08110_2.00
Caenorhabditis elegans
HNHNSGCGSSAAWWN

NWWTTSSCGCSNDND
ChIP-seq
Mathelier et al.(2014)
MA0541.1
0.500 0.500
E2F4
M08109_2.00
Homo sapiens
NSGCGGGARVN

NBYTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA0470.1
0.500 0.500
E2F4
M07942_2.00
Homo sapiens
SGCGSGARDNNBNVN

NBNVNNHYTCSCGCS
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F4_UCD
0.500 0.500
E2F4
M07943_2.00
Homo sapiens
SGCGGGARDNNBVVN

NBBVNNHYTCCCGCS
ChIP-seq
Gerstein et al.(2012)
K562b_E2F4_UCD
0.500 0.500
efl-1
M08197_2.00
Caenorhabditis elegans
BGCGSSAAWW

WWTTSSCGCV
ChIP-seq
Contrino et al.(2012)
Mw140
0.500 0.500
E2F4
M09036_2.00
Homo sapiens
VDRGGCGGGRVND

HNBYCCCGCCYHB
Misc
Kulakovskiy et al.(2013)
E2F4_HUMAN.H11MO.0.A
0.500 0.500
E2f4
M09037_2.00
Mus musculus
NRDDGGCGGGRMNN

NNKYCCCGCCHHYN
Misc
Kulakovskiy et al.(2013)
E2F4_MOUSE.H11MO.0.A
0.500 0.500
E2f5
M09042_2.00
Mus musculus
NGCGCSAAAN

NTTTSGCGCN
Misc
Kulakovskiy et al.(2013)
E2F5_MOUSE.H11MO.0.B
0.500 0.500
efl-1
M09526_2.00
Caenorhabditis elegans
WGCAARYGCGCTCYA

TRGAGCGCRYTTGCW
Misc
Heinz et al.(2010)
cElegans-L1-EFL1_modEncode
0.500 0.500
E2F4
M09524_2.00
Homo sapiens
VGCGSGAADH

DHTTCSCGCB
Misc
Heinz et al.(2010)
K562-E2F4_GSE31477
0.500 0.500
E2F4
M10457_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_05
0.500 0.500
E2F4
M10458_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_Q3
0.500 0.500
E2F4
M10459_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_Q6
0.500 0.500
E2F1
M02952_2.00
Homo sapiens
WWDGGCGCCAAW

WTTGGCGCCHWW
SELEX
Jolma et al.(2013)
E2F1_1
0.469 0.469
E2F1
M02953_2.00
Homo sapiens
WWKGGCGCCWWW

WWWGGCGCCMWW
SELEX
Jolma et al.(2013)
E2F1_2
0.469 0.469
E2F1
M02954_2.00
Homo sapiens
WWWKGGCGCCMWWW

WWWKGGCGCCMWWW
SELEX
Jolma et al.(2013)
E2F1_3
0.469 0.469
E2F1
M02955_2.00
Homo sapiens
AAWKGGCGCCAWTW

WAWTGGCGCCMWTT
SELEX
Jolma et al.(2013)
E2F1_4
0.469 0.469
E2F1
M04700_2.00
Homo sapiens
NWWWDGGCGCCAAAWH

DWTTTGGCGCCHWWWN
SELEX
Yin et al.(2017)
E2F1_FL_HT-SELEX
0.469 0.469
E2F1
M07938_2.00
Homo sapiens
VRRVNRVGCGSGMDS

SHKCSCGCBYNBYYB
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F1_UCD
0.469 0.469
E2f
M08196_2.00
Drosophila melanogaster
AAWWBSSCGSCAA

TTGSCGSSVWWTT
ChIP-seq
Contrino et al.(2012)
Mf10
0.469 0.469
E2F1
M09030_2.00
Homo sapiens
NVNDGGCGGGARVN

NBYTCCCGCCHNBN
Misc
Kulakovskiy et al.(2013)
E2F1_HUMAN.H11MO.0.A
0.469 0.469
E2f1
M09041_2.00
Mus musculus
NDDGGCGGGRVN

NBYCCCGCCHHN
Misc
Kulakovskiy et al.(2013)
E2F1_MOUSE.H11MO.0.A
0.469 0.469
E2F1
M09521_2.00
Homo sapiens
NNGGCGGGAA

TTCCCGCCNN
Misc
Heinz et al.(2010)
Hela-E2F1_GSE22478
0.469 0.469
E2F1
M10444_2.00
Homo sapiens
THVGCGCGAAAAHKR

YMDTTTTCGCGCBDA
Transfac
Matys et al.(2006)
V$E2F_01
0.469 0.469
E2F1
M10445_2.00
Homo sapiens
BHKSGCGCSAAA

TTTSGCGCSMDV
Transfac
Matys et al.(2006)
V$E2F_03
0.469 0.469
E2F1
M10446_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_01
0.469 0.469
E2F1
M10447_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_02
0.469 0.469
E2F1
M10448_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3_01
0.469 0.469
E2F1
M10449_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3
0.469 0.469
E2F1
M10450_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_01
0.469 0.469
E2F1
M10451_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_02
0.469 0.469
E2F1
M10452_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4
0.469 0.469
E2F1
M10453_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q6
0.469 0.469
E2F2
M01963_2.00
Tupaia belangeri
WDVGCGCBHW

WDVGCGCBHW
PBM
Weirauch et al.(2014)
pTH9291
0.438 0.438
efl-2
M01966_2.00
Caenorhabditis elegans
NDBGCGSBNN

NNVSCGCVHN
PBM
Weirauch et al.(2014)
pTH5916
0.438 0.438
efl-2
M00662_2.00
Caenorhabditis elegans
NSGCGSNNDN

NHNNSCGCSN
PBM
Narasimhan et al.(2015)
pTH9173
0.438 0.438
E2FC
M06870_2.00
Arabidopsis thaliana
AWDDDGGCGCCAAAR

YTTTGGCGCCHHHWT
Dap-seq
OMalley et al.(2016)
E2FC_col_a
0.438 0.438
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PEQ_0000364301-mRNA-1 E2F 56 92

Links

Other E2F family TFs
Other Parascaris equorum TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MGA Homo sapiens ENSG00000174197 D 0.000
MGA Tupaia belangeri ENSTBEG00000002010 I 0.000
ENSSTOG00000000653 Ictidomys tridecemlineatus ENSSTOG00000000653 I 0.000
MGA Sorex araneus ENSSARG00000007043 I 0.000
Mga Rattus norvegicus ENSRNOG00000006378 I 0.000
MGA Pteropus vampyrus ENSPVAG00000013732 I 0.000
MGA Pan troglodytes ENSPTRG00000006953 I 0.000
ENSPPYG00000006380 Pongo abelii ENSPPYG00000006380 I 0.000
MGA Procavia capensis ENSPCAG00000013131 I 0.000
MGA Otolemur garnettii ENSOGAG00000016028 I 0.000
MGA Oryctolagus cuniculus ENSOCUG00000006505 I 0.000
XP_002933783 Xenopus tropicalis XP_002933783 I 0.000
ENSTSYG00000014605 Tarsius syrichta ENSTSYG00000014605 I 0.000
MGA Tursiops truncatus ENSTTRG00000002514 I 0.000
Pvit_03503 Pogona vitticeps Pvit_03503 I 0.000
Ogr06446 Ophisaurus gracilis Ogr06446 I 0.000
Gfo_R014126 Geospiza fortis Gfo_R014126 I 0.000
ENSP00000219905 Macaca fascicularis ENSP00000219905 I 0.000
ENSP00000219905-D1 Bos grunniens ENSP00000219905-D1 I 0.000
Cmyd_10013542 Chelonia mydas Cmyd_10013542 I 0.000
Afo_R002341 Aptenodytes forsteri Afo_R002341 I 0.000
Aan_R008874 Calypte anna Aan_R008874 I 0.000
MGA Vicugna pacos ENSVPAG00000006239 I 0.000
ENSOARG00000020404 Ovis aries ENSOARG00000020404 I 0.000
MGA Ornithorhynchus anatinus ENSOANG00000004502 I 0.000
ENSFALG00000006030 Ficedula albicollis ENSFALG00000006030 I 0.000
MGA Erinaceus europaeus ENSEEUG00000004604 I 0.000
MGA Equus caballus ENSECAG00000006544 I 0.000
ENSCSAG00000007832 Chlorocebus sabaeus ENSCSAG00000007832 I 0.000
MGA Callithrix jacchus ENSCJAG00000020688 I 0.000
MGA Choloepus hoffmanni ENSCHOG00000012044 I 0.000
MGA Canis familiaris ENSCAFG00000009662 I 0.000
MGA Bos taurus ENSBTAG00000015138 I 0.000
ENSAPLG00000010304 Anas platyrhynchos ENSAPLG00000010304 I 0.000
MGA Felis catus ENSFCAG00000007347 I 0.000
ENSGALG00000008653 Gallus gallus ENSGALG00000008653 I 0.000
MGA Gorilla gorilla ENSGGOG00000001640 I 0.000
ENSNLEG00000003750 Nomascus leucogenys ENSNLEG00000003750 I 0.000
Mga Mus musculus ENSMUSG00000033943 I 0.000
ENSMPUG00000008968 Mustela putorius furo ENSMPUG00000008968 I 0.000
MGA Monodelphis domestica ENSMODG00000000052 I 0.000
MGA Myotis lucifugus ENSMLUG00000015227 I 0.000
MGA Microcebus murinus ENSMICG00000001788 I 0.000
MGA Meleagris gallopavo ENSMGAG00000011293 I 0.000
ENSLOCG00000011689 Lepisosteus oculatus ENSLOCG00000011689 I 0.000
ENSLACG00000002619 Latimeria chalumnae ENSLACG00000002619 I 0.000
ENSAMEG00000016587 Ailuropoda melanoleuca ENSAMEG00000016587 I 0.000