scaffold51-EXSNAP2012.35 (Pristionchus exspectatus)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 scaffold51-EXSNAP2012.35 T174381_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
E2F8
M02959_2.00
Homo sapiens
TTTGGCGGGAAA

TTTCCCGCCAAA
SELEX
Jolma et al.(2013)
E2F8_1
0.440 0.440
E2F8
M04703_2.00
Homo sapiens
WDKTGGCGGGARNN

NNYTCCCGCCAMHW
SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX
0.440 0.440
E2F8
M04704_2.00
Homo sapiens
WTTTGGCGGGAAWN

NWTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX
0.440 0.440
E2F7
M02960_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Jolma et al.(2013)
E2F7_1
0.433 0.433
E2F7
M04705_2.00
Homo sapiens
WTTTGGCGGGAAAN

NTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX
0.433 0.433
E2F7
M09033_2.00
Homo sapiens
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B
0.433 0.433
E2f7
M09040_2.00
Mus musculus
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C
0.433 0.433
E2F7
M09522_2.00
Homo sapiens
NSGCGSGAAMNN

NNKTTCSCGCSN
Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673
0.433 0.433
E2F7
M04706_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX
0.433 0.433
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold51-EXSNAP2012.35 E2F 92 160
scaffold51-EXSNAP2012.35 E2F 260 341

Links

Other E2F family TFs
Other Pristionchus exspectatus TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PPA21298 Pristionchus pacificus PPA21298 I 0.993
scaffold884-EXSNAP2012.1 Pristionchus exspectatus scaffold884-EXSNAP2012.1 I 0.992
TCNE_0000873901 Toxocara canis TCNE_0000873901 I 0.836
SMUV_0000434101 Syphacia muris SMUV_0000434101 I 0.821
ASU_04096 Ascaris suum ASU_04096 I 0.799
ALUE_0000773501 Ascaris lumbricoides ALUE_0000773501 I 0.799
DICVIV_01764 Dictyocaulus viviparus DICVIV_01764 I 0.793
HCOI01892600 Haemonchus contortus HCOI01892600 I 0.793
TELCIR_03927 Teladorsagia circumcincta TELCIR_03927 I 0.793
ASIM_0001001801 Anisakis simplex ASIM_0001001801 I 0.778
efl-3 Caenorhabditis elegans WBGene00009899 I 0.776
CJA26768 Caenorhabditis japonica CJA26768 I 0.776
CBN23380 Caenorhabditis brenneri CBN23380 I 0.770
CGOC_0000227901 Cylicostephanus goldi CGOC_0000227901 N 0.770
CRE01589 Caenorhabditis remanei CRE01589 I 0.770
CBG00680 Caenorhabditis briggsae CBG00680 I 0.763
OESDEN_14635 Oesophagostomum dentatum OESDEN_14635 I 0.762
HPBE_0000610601 Heligmosomoides bakeri HPBE_0000610601 I 0.756
ANCCAN_04600 Ancylostoma caninum ANCCAN_04600 I 0.756
ACAC_0000024001 Angiostrongylus cantonensis ACAC_0000024001 I 0.756
L898_g3621 Steinernema monticolum L898_g3621 I 0.752
OESDEN_13289 Oesophagostomum dentatum OESDEN_13289 I 0.741
L893_g19965 Steinernema glaseri L893_g19965 I 0.720
L892_g1818 Steinernema scapterisci L892_g1818 I 0.716
L596_g12895 Steinernema carpocapsae L596_g12895 I 0.706
L889_g28422 Steinernema feltiae L889_g28422 I 0.701
augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 I 0.693
BXY_1693900 Bursaphelenchus xylophilus BXY_1693900 I 0.691
Minc04041 Meloidogyne incognita Minc04041 I 0.684
maker-nMf.1.1.scaf01659-augustus-gene-0.9 Meloidogyne floridensis maker-nMf.1.1.scaf01659-augustus-gene-0.9 I 0.684
Minc05731 Meloidogyne incognita Minc05731 I 0.684
MhA1_Contig130.frz3.gene44 Meloidogyne hapla MhA1_Contig130.frz3.gene44 I 0.679
EVEC_0001263301 Enterobius vermicularis EVEC_0001263301 N 0.642
SVUK_0001371201 Strongylus vulgaris SVUK_0001371201 I 0.582
nDi.2.2.2.g08162 Dirofilaria immitis nDi.2.2.2.g08162 N 0.556
nLs.2.1.2.g03748 Litomosoides sigmodontis nLs.2.1.2.g03748 N 0.553
WUBG_01805 Wuchereria bancrofti WUBG_01805 N 0.552
LOAG_07147 Loa loa LOAG_07147 N 0.552
OFLC_0000212001 Onchocerca flexuosa OFLC_0000212001 N 0.549
WBGene00247952 Onchocerca volvulus WBGene00247952 N 0.545
Bm4234 Brugia malayi Bm4234 N 0.545
nOo.2.0.1.g06441 Onchocerca ochengi nOo.2.0.1.g06441 N 0.545
DME_0000727201 Dracunculus medinensis DME_0000727201 I 0.500
TELCIR_22846 Teladorsagia circumcincta TELCIR_22846 I 0.485
TCLT_0000737401 Thelazia callipaeda TCLT_0000737401 N 0.481
NECAME_17546 Necator americanus NECAME_17546 N 0.470
e2f8 Takifugu rubripes ENSTRUG00000015792 I 0.456
XP_002942881 Xenopus tropicalis XP_002942881 I 0.449
e2f8 Gasterosteus aculeatus ENSGACG00000017086 I 0.449
ENSLOCG00000016279 Lepisosteus oculatus ENSLOCG00000016279 I 0.449
e2f8.L Xenopus laevis XB-GENE-1219153 I 0.449
gw.270.22.1 Branchiostoma floridae gw.270.22.1 I 0.449
ENSPSIG00000008707 Pelodiscus sinensis ENSPSIG00000008707 I 0.448
Pvit_10252 Pogona vitticeps Pvit_10252 I 0.448
Tal_R008430 Tyto alba Tal_R008430 I 0.441
Ogr19156 Ophisaurus gracilis Ogr19156 I 0.441
Afo_R006642 Aptenodytes forsteri Afo_R006642 I 0.441
e2f8 Tetraodon nigroviridis ENSTNIG00000009615 I 0.441
ENSLOCG00000004831 Lepisosteus oculatus ENSLOCG00000004831 I 0.441
ENSONIG00000007135 Oreochromis niloticus ENSONIG00000007135 I 0.441
E2F8 Equus caballus ENSECAG00000016457 I 0.441
ENSGMOG00000019253 Gadus morhua ENSGMOG00000019253 I 0.441
Aan_R006648 Calypte anna Aan_R006648 I 0.441
E2F8 Pan troglodytes ENSPTRG00000003435 I 0.440
Alligator_sinensis_CCG013028.1 Alligator sinensis Alligator_sinensis_CCG013028.1 I 0.440
Alligator_sinensis_CCG013028.2 Alligator sinensis Alligator_sinensis_CCG013028.2 I 0.440
E2F8 Tursiops truncatus ENSTTRG00000005707 I 0.440
Sakowv30003251m.g Saccoglossus kowalevskii Sakowv30003251m.g I 0.438
Alligator_sinensis_CCG013467.1 Alligator sinensis Alligator_sinensis_CCG013467.1 I 0.434
E2F8 Monodelphis domestica ENSMODG00000009029 I 0.434
Myotis_brandtii_E2F7_10034114 Myotis brandtii Myotis_brandtii_E2F7_10034114 I 0.434
ENSNLEG00000017803 Nomascus leucogenys ENSNLEG00000017803 I 0.434
ENSAMXG00000016864 Astyanax mexicanus ENSAMXG00000016864 I 0.434
E2F8 Macaca mulatta ENSMMUG00000010853 I 0.434
E2F7 Myotis lucifugus ENSMLUG00000012116 I 0.434
E2F8 Homo sapiens ENSG00000129173 D 0.434
ENSCSAG00000005093 Chlorocebus sabaeus ENSCSAG00000005093 I 0.434
ENSAPLG00000009091 Anas platyrhynchos ENSAPLG00000009091 I 0.434
ENSPANG00000005225 Papio anubis ENSPANG00000005225 I 0.434
ENSPPYG00000003424 Pongo abelii ENSPPYG00000003424 I 0.434
Cmyd_10011734 Chelonia mydas Cmyd_10011734 I 0.434
Cmyd_10016427 Chelonia mydas Cmyd_10016427 I 0.434
ENSP00000379463 Macaca fascicularis ENSP00000379463 I 0.434
Gfo_R003976 Geospiza fortis Gfo_R003976 I 0.434
ENSDORG00000003404 Dipodomys ordii ENSDORG00000003404 I 0.434
Brh_R011115 Buceros rhinoceros Brh_R011115 I 0.434
ENSPSIG00000012629 Pelodiscus sinensis ENSPSIG00000012629 I 0.434
CapteG198117 Capitella teleta CapteG198117 I 0.434
E2F7 Anolis carolinensis ENSACAG00000005414 I 0.434
ENSSHAG00000018372 Sarcophilus harrisii ENSSHAG00000018372 I 0.434
E2F7 Dasypus novemcinctus ENSDNOG00000001580 I 0.433
E2f8 Mus musculus ENSMUSG00000046179 I 0.433
ENSSHAG00000002919 Sarcophilus harrisii ENSSHAG00000002919 I 0.433
LotgiG168338 Lottia gigantea LotgiG168338 I 0.433
E2F7 Oryctolagus cuniculus ENSOCUG00000004932 I 0.433
E2F8 Meleagris gallopavo ENSMGAG00000002303 I 0.433
ENSLACG00000016113 Latimeria chalumnae ENSLACG00000016113 I 0.433
E2F7 Loxodonta africana ENSLAFG00000017902 I 0.433
ENSFALG00000010433 Ficedula albicollis ENSFALG00000010433 I 0.433