scaffold884-EXSNAP2012.1 (Pristionchus exspectatus)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 scaffold884-EXSNAP2012.1 T174382_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
E2F8
M02959_2.00 		Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA		 SELEX
Jolma et al.(2013)
E2F8_1 		0.451 0.451
E2F8
M04703_2.00 		Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW		 SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX 		0.451 0.451
E2F8
M04704_2.00 		Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX 		0.451 0.451
E2F7
M02960_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Jolma et al.(2013)
E2F7_1 		0.444 0.444
E2F7
M04705_2.00 		Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX 		0.444 0.444
E2F7
M09033_2.00 		Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B 		0.444 0.444
E2f7
M09040_2.00 		Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C 		0.444 0.444
E2F7
M09522_2.00 		Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN		 Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673 		0.444 0.444
E2F7
M04706_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX 		0.444 0.444
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold884-EXSNAP2012.1 E2F 92 160
scaffold884-EXSNAP2012.1 E2F 260 340

Links

Other E2F family TFs
Other Pristionchus exspectatus TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PPA21298 Pristionchus pacificus PPA21298 I 0.993
scaffold51-EXSNAP2012.35 Pristionchus exspectatus scaffold51-EXSNAP2012.35 I 0.992
TCNE_0000873901 Toxocara canis TCNE_0000873901 I 0.836
SMUV_0000434101 Syphacia muris SMUV_0000434101 I 0.827
ASU_04096 Ascaris suum ASU_04096 I 0.812
ALUE_0000773501 Ascaris lumbricoides ALUE_0000773501 I 0.812
DICVIV_01764 Dictyocaulus viviparus DICVIV_01764 I 0.793
TELCIR_03927 Teladorsagia circumcincta TELCIR_03927 I 0.793
HCOI01892600 Haemonchus contortus HCOI01892600 I 0.793
ASIM_0001001801 Anisakis simplex ASIM_0001001801 I 0.785
CJA26768 Caenorhabditis japonica CJA26768 I 0.776
efl-3 Caenorhabditis elegans WBGene00009899 I 0.776
HPBE_0000610601 Heligmosomoides bakeri HPBE_0000610601 I 0.774
OESDEN_14635 Oesophagostomum dentatum OESDEN_14635 I 0.772
CBN23380 Caenorhabditis brenneri CBN23380 I 0.770
CRE01589 Caenorhabditis remanei CRE01589 I 0.770
ANCCAN_04600 Ancylostoma caninum ANCCAN_04600 I 0.763
ACAC_0000024001 Angiostrongylus cantonensis ACAC_0000024001 I 0.763
CBG00680 Caenorhabditis briggsae CBG00680 I 0.763
CGOC_0000227901 Cylicostephanus goldi CGOC_0000227901 N 0.762
L898_g3621 Steinernema monticolum L898_g3621 I 0.744
OESDEN_13289 Oesophagostomum dentatum OESDEN_13289 I 0.741
L892_g1818 Steinernema scapterisci L892_g1818 I 0.729
L893_g19965 Steinernema glaseri L893_g19965 I 0.727
L889_g28422 Steinernema feltiae L889_g28422 I 0.714
L596_g12895 Steinernema carpocapsae L596_g12895 I 0.713
augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 I 0.702
BXY_1693900 Bursaphelenchus xylophilus BXY_1693900 I 0.699
Minc04041 Meloidogyne incognita Minc04041 I 0.692
MhA1_Contig130.frz3.gene44 Meloidogyne hapla MhA1_Contig130.frz3.gene44 I 0.692
Minc05731 Meloidogyne incognita Minc05731 I 0.692
maker-nMf.1.1.scaf01659-augustus-gene-0.9 Meloidogyne floridensis maker-nMf.1.1.scaf01659-augustus-gene-0.9 I 0.692
EVEC_0001263301 Enterobius vermicularis EVEC_0001263301 N 0.647
SVUK_0001371201 Strongylus vulgaris SVUK_0001371201 I 0.582
nLs.2.1.2.g03748 Litomosoides sigmodontis nLs.2.1.2.g03748 N 0.561
LOAG_07147 Loa loa LOAG_07147 N 0.556
nDi.2.2.2.g08162 Dirofilaria immitis nDi.2.2.2.g08162 N 0.556
WUBG_01805 Wuchereria bancrofti WUBG_01805 N 0.556
WBGene00247952 Onchocerca volvulus WBGene00247952 N 0.549
Bm4234 Brugia malayi Bm4234 N 0.549
nOo.2.0.1.g06441 Onchocerca ochengi nOo.2.0.1.g06441 N 0.549
OFLC_0000212001 Onchocerca flexuosa OFLC_0000212001 N 0.549
DME_0000727201 Dracunculus medinensis DME_0000727201 I 0.507
TELCIR_22846 Teladorsagia circumcincta TELCIR_22846 I 0.496
TCLT_0000737401 Thelazia callipaeda TCLT_0000737401 N 0.489
NECAME_17546 Necator americanus NECAME_17546 N 0.474
e2f8 Takifugu rubripes ENSTRUG00000015792 I 0.463
Pvit_10252 Pogona vitticeps Pvit_10252 I 0.459
ENSPSIG00000008707 Pelodiscus sinensis ENSPSIG00000008707 I 0.459
e2f8.L Xenopus laevis XB-GENE-1219153 I 0.456
e2f8 Gasterosteus aculeatus ENSGACG00000017086 I 0.456
ENSLOCG00000016279 Lepisosteus oculatus ENSLOCG00000016279 I 0.456
XP_002942881 Xenopus tropicalis XP_002942881 I 0.456
E2F8 Tursiops truncatus ENSTTRG00000005707 I 0.451
E2F8 Pan troglodytes ENSPTRG00000003435 I 0.451
ENSPSIG00000012629 Pelodiscus sinensis ENSPSIG00000012629 I 0.451
Alligator_sinensis_CCG013028.1 Alligator sinensis Alligator_sinensis_CCG013028.1 I 0.451
Alligator_sinensis_CCG013028.2 Alligator sinensis Alligator_sinensis_CCG013028.2 I 0.451
ENSGMOG00000019253 Gadus morhua ENSGMOG00000019253 I 0.449
Tal_R008430 Tyto alba Tal_R008430 I 0.449
ENSONIG00000007135 Oreochromis niloticus ENSONIG00000007135 I 0.449
e2f8 Tetraodon nigroviridis ENSTNIG00000009615 I 0.449
Ogr19156 Ophisaurus gracilis Ogr19156 I 0.449
Aan_R006648 Calypte anna Aan_R006648 I 0.449
E2F8 Equus caballus ENSECAG00000016457 I 0.449
gw.270.22.1 Branchiostoma floridae gw.270.22.1 I 0.449
Afo_R006642 Aptenodytes forsteri Afo_R006642 I 0.449
ENSLOCG00000004831 Lepisosteus oculatus ENSLOCG00000004831 I 0.449
Sakowv30003251m.g Saccoglossus kowalevskii Sakowv30003251m.g I 0.445
LotgiG168338 Lottia gigantea LotgiG168338 I 0.444
ENSSHAG00000002919 Sarcophilus harrisii ENSSHAG00000002919 I 0.444
E2F7 Loxodonta africana ENSLAFG00000017902 I 0.444
E2F8 Meleagris gallopavo ENSMGAG00000002303 I 0.444
E2F7 Oryctolagus cuniculus ENSOCUG00000004932 I 0.444
ENSLACG00000016113 Latimeria chalumnae ENSLACG00000016113 I 0.444
ENSFALG00000010433 Ficedula albicollis ENSFALG00000010433 I 0.444
E2F7 Dasypus novemcinctus ENSDNOG00000001580 I 0.444
E2f8 Mus musculus ENSMUSG00000046179 I 0.444
ENSNLEG00000017803 Nomascus leucogenys ENSNLEG00000017803 I 0.441
ENSPANG00000005225 Papio anubis ENSPANG00000005225 I 0.441
ENSP00000379463 Macaca fascicularis ENSP00000379463 I 0.441
Alligator_sinensis_CCG013467.1 Alligator sinensis Alligator_sinensis_CCG013467.1 I 0.441
Gfo_R003976 Geospiza fortis Gfo_R003976 I 0.441
Cmyd_10011734 Chelonia mydas Cmyd_10011734 I 0.441
Brh_R011115 Buceros rhinoceros Brh_R011115 I 0.441
E2F7 Myotis lucifugus ENSMLUG00000012116 I 0.441
ENSCSAG00000005093 Chlorocebus sabaeus ENSCSAG00000005093 I 0.441
ENSAPLG00000009091 Anas platyrhynchos ENSAPLG00000009091 I 0.441
ENSAMXG00000016864 Astyanax mexicanus ENSAMXG00000016864 I 0.441
ENSDORG00000003404 Dipodomys ordii ENSDORG00000003404 I 0.441
E2F8 Homo sapiens ENSG00000129173 D 0.441
E2F8 Monodelphis domestica ENSMODG00000009029 I 0.441
E2F8 Macaca mulatta ENSMMUG00000010853 I 0.441
Myotis_brandtii_E2F7_10034114 Myotis brandtii Myotis_brandtii_E2F7_10034114 I 0.441
Cmyd_10016427 Chelonia mydas Cmyd_10016427 I 0.441
ENSSHAG00000018372 Sarcophilus harrisii ENSSHAG00000018372 I 0.441
ENSPPYG00000003424 Pongo abelii ENSPPYG00000003424 I 0.441
E2F7 Anolis carolinensis ENSACAG00000005414 I 0.441
ENSONIG00000012070 Oreochromis niloticus ENSONIG00000012070 I 0.436
ENSLACG00000014031 Latimeria chalumnae ENSLACG00000014031 I 0.436
gw1.8.144.1 Ostreococcus RCC809 gw1.8.144.1 I 0.436
E2F7 Procavia capensis ENSPCAG00000000596 I 0.436
ENSGALG00000004023 Gallus gallus ENSGALG00000004023 I 0.434
e2f8 Oryzias latipes ENSORLG00000000786 I 0.434
E2F8 Felis catus ENSFCAG00000010706 I 0.434
E2F7 Felis catus ENSFCAG00000010756 I 0.434
E2F7 Gorilla gorilla ENSGGOG00000012645 I 0.434
E2F7 Homo sapiens ENSG00000165891 D 0.434
E2F7 Pan troglodytes ENSPTRG00000005245 I 0.434
E2F8 Pteropus vampyrus ENSPVAG00000012522 I 0.434
E2F8 Myotis lucifugus ENSMLUG00000015592 I 0.434
E2F7 Pteropus vampyrus ENSPVAG00000000288 I 0.434
ENSMEUG00000008461 Macropus eugenii ENSMEUG00000008461 I 0.434
E2F8 Loxodonta africana ENSLAFG00000022713 I 0.434
ENSPANG00000004929 Papio anubis ENSPANG00000004929 I 0.434
ENSPPYG00000004791 Pongo abelii ENSPPYG00000004791 I 0.434
E2F8 Choloepus hoffmanni ENSCHOG00000006322 I 0.434
E2F8 Callithrix jacchus ENSCJAG00000006811 I 0.434
E2F7 Callithrix jacchus ENSCJAG00000019162 I 0.434
E2F8 Canis familiaris ENSCAFG00000009431 I 0.434
ENSAMEG00000007247 Ailuropoda melanoleuca ENSAMEG00000007247 I 0.434
ENSPFOG00000003272 Poecilia formosa ENSPFOG00000003272 I 0.434
E2F7 Bos taurus ENSBTAG00000016931 I 0.434
E2F7 Cavia porcellus ENSCPOG00000007375 I 0.434
E2F8 Cavia porcellus ENSCPOG00000013766 I 0.434
E2F8 Dasypus novemcinctus ENSDNOG00000003349 I 0.434
E2f8 Rattus norvegicus ENSRNOG00000022537 I 0.434
ENSECAG00000017963 Equus caballus ENSECAG00000017963 I 0.434
e2f8 Danio rerio ENSDARG00000057323 I 0.434
e2f7 Danio rerio ENSDARG00000008986 I 0.434
ENSCSAG00000003998 Chlorocebus sabaeus ENSCSAG00000003998 I 0.434
CapteG198117 Capitella teleta CapteG198117 I 0.434
E2F8 Erinaceus europaeus ENSEEUG00000011472 I 0.434
E2F7 Macaca mulatta ENSMMUG00000022846 I 0.434
ENSNLEG00000004897 Nomascus leucogenys ENSNLEG00000004897 I 0.434
E2F7 Taeniopygia guttata ENSTGUG00000007515 I 0.434
E2F8 Ornithorhynchus anatinus ENSOANG00000011290 I 0.434
Aan_R005623 Calypte anna Aan_R005623 I 0.434
E2F7 Tupaia belangeri ENSTBEG00000005417 I 0.434
Afo_R014077 Aptenodytes forsteri Afo_R014077 I 0.434
E2f7 Mus musculus ENSMUSG00000020185 D 0.434
NV16280 Nasonia vitripennis NV16280 I 0.434
ENSOARG00000008807 Ovis aries ENSOARG00000008807 I 0.434
ENSTSYG00000008243 Tarsius syrichta ENSTSYG00000008243 I 0.434
ENSTSYG00000007279 Tarsius syrichta ENSTSYG00000007279 I 0.434
E2F7 Tursiops truncatus ENSTTRG00000000110 I 0.434
E2F8 Oryctolagus cuniculus ENSOCUG00000004485 I 0.434
ENSXMAG00000006252 Xiphophorus maculatus ENSXMAG00000006252 I 0.434
E2F7 Vicugna pacos ENSVPAG00000011151 I 0.434
ENSMPUG00000017468 Mustela putorius furo ENSMPUG00000017468 I 0.434
ENSMPUG00000013899 Mustela putorius furo ENSMPUG00000013899 I 0.434
E2F7 Sorex araneus ENSSARG00000004122 I 0.434
E2F7 Otolemur garnettii ENSOGAG00000010821 I 0.434
Myotis_brandtii_E2F8_10018668 Myotis brandtii Myotis_brandtii_E2F8_10018668 I 0.434
E2F7 Monodelphis domestica ENSMODG00000020465 I 0.434
Tal_R000495 Tyto alba Tal_R000495 I 0.434
E2f7 Rattus norvegicus ENSRNOG00000026252 I 0.434
E2F8 Otolemur garnettii ENSOGAG00000005774 I 0.434
ENSP00000323246 Macaca fascicularis ENSP00000323246 I 0.434
ENSSTOG00000007887 Ictidomys tridecemlineatus ENSSTOG00000007887 I 0.434
Brh_R005316 Buceros rhinoceros Brh_R005316 I 0.434
ENSSTOG00000008838 Ictidomys tridecemlineatus ENSSTOG00000008838 I 0.434
E2F8 Sus scrofa ENSSSCG00000013352 I 0.434
ENSAMEG00000017950 Ailuropoda melanoleuca ENSAMEG00000017950 I 0.434
E2F7 Sus scrofa ENSSSCG00000000950 I 0.434
ENSBTAP00000022518-D1 Bos grunniens ENSBTAP00000022518-D1 I 0.434
ENSOARG00000014941 Ovis aries ENSOARG00000014941 I 0.431
E2F8 Anolis carolinensis ENSACAG00000015743 I 0.429
ENSBTAP00000023190-D1 Bos grunniens ENSBTAP00000023190-D1 I 0.429
ENSPMAG00000001858 Petromyzon marinus ENSPMAG00000001858 I 0.429
E2F8 Taeniopygia guttata ENSTGUG00000015857 I 0.429
Gfo_R003950 Geospiza fortis Gfo_R003950 I 0.429
E2F8 Bos taurus ENSBTAG00000017446 I 0.429