SMUV_0000434101 (Syphacia muris)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 SMUV_0000434101 T174387_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
E2F8
M02959_2.00
Homo sapiens
TTTGGCGGGAAA

TTTCCCGCCAAA
SELEX
Jolma et al.(2013)
E2F8_1
0.467 0.467
E2F8
M04703_2.00
Homo sapiens
WDKTGGCGGGARNN

NNYTCCCGCCAMHW
SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX
0.467 0.467
E2F8
M04704_2.00
Homo sapiens
WTTTGGCGGGAAWN

NWTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX
0.467 0.467
E2F7
M02960_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Jolma et al.(2013)
E2F7_1
0.452 0.452
E2F7
M04705_2.00
Homo sapiens
WTTTGGCGGGAAAN

NTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX
0.452 0.452
E2F7
M09033_2.00
Homo sapiens
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B
0.452 0.452
E2f7
M09040_2.00
Mus musculus
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C
0.452 0.452
E2F7
M09522_2.00
Homo sapiens
NSGCGSGAAMNN

NNKTTCSCGCSN
Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673
0.452 0.452
E2F7
M04706_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX
0.452 0.452
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000434101-mRNA-1 E2F 59 125
SMUV_0000434101-mRNA-1 E2F 196 278

Links

Other E2F family TFs
Other Syphacia muris TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
EmuJ_001189700 Echinococcus multilocularis EmuJ_001189700 N 0.000
D915_03045 Fasciola hepatica D915_03045 N 0.000
TTAC_0000960501 Hydatigera taeniaeformis TTAC_0000960501 N 0.000
HDID_0000423901 Hymenolepis diminuta HDID_0000423901 N 0.000
HmN_000199100 Hymenolepis microstoma HmN_000199100 N 0.000
HNAJ_0000415201 Hymenolepis nana HNAJ_0000415201 N 0.000
OFLC_0000380401 Onchocerca flexuosa OFLC_0000380401 I 0.000
TASK_0000366101 Taenia asiatica TASK_0000366101 N 0.000
TsM_000871200 Taenia solium TsM_000871200 N 0.000