SROB_0001283101 (Schistosoma rodhaini)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 SROB_0001283101 T174396_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
E2F4
M02961_2.00
Homo sapiens
AATGGCGCCAAA

TTTGGCGCCATT
SELEX
Jolma et al.(2013)
E2F4_1
0.862 0.862
E2F4
M02962_2.00
Homo sapiens
TTTGGCGCCAAA

TTTGGCGCCAAA
SELEX
Jolma et al.(2013)
E2F4_2
0.862 0.862
E2F4
M04707_2.00
Homo sapiens
NWWKGGCGCCAAAW

WTTTGGCGCCMWWN
SELEX
Yin et al.(2017)
E2F4_eDBD_HT-SELEX
0.862 0.862
E2F4
M08109_2.00
Homo sapiens
NSGCGGGARVN

NBYTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA0470.1
0.862 0.862
E2F4
M07942_2.00
Homo sapiens
SGCGSGARDNNBNVN

NBNVNNHYTCSCGCS
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F4_UCD
0.862 0.862
E2F4
M07943_2.00
Homo sapiens
SGCGGGARDNNBVVN

NBBVNNHYTCCCGCS
ChIP-seq
Gerstein et al.(2012)
K562b_E2F4_UCD
0.862 0.862
E2F4
M09036_2.00
Homo sapiens
VDRGGCGGGRVND

HNBYCCCGCCYHB
Misc
Kulakovskiy et al.(2013)
E2F4_HUMAN.H11MO.0.A
0.862 0.862
E2f4
M09037_2.00
Mus musculus
NRDDGGCGGGRMNN

NNKYCCCGCCHHYN
Misc
Kulakovskiy et al.(2013)
E2F4_MOUSE.H11MO.0.A
0.862 0.862
E2F4
M09524_2.00
Homo sapiens
VGCGSGAADH

DHTTCSCGCB
Misc
Heinz et al.(2010)
K562-E2F4_GSE31477
0.862 0.862
E2F4
M10457_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_05
0.862 0.862
E2F4
M10458_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_Q3
0.862 0.862
E2F4
M10459_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_Q6
0.862 0.862
E2f5
M09042_2.00
Mus musculus
NGCGCSAAAN

NTTTSGCGCN
Misc
Kulakovskiy et al.(2013)
E2F5_MOUSE.H11MO.0.B
0.846 0.846
e_gw1.38.2.1
M01968_2.00
Physcomitrella patens
NSGCGCBHHN

NDDVGCGCSN
PBM
Weirauch et al.(2014)
pTH5707
0.723 0.723
estExt_gwp_gw1.C_220046
M01225_2.00
Physcomitrella patens
VGCGCBHHNN

NNDDVGCGCB
PBM
Lambert et al.(2019)
pTH9809
0.723 0.723
E2FC
M06870_2.00
Arabidopsis thaliana
AWDDDGGCGCCAAAR

YTTTGGCGCCHHHWT
Dap-seq
OMalley et al.(2016)
E2FC_col_a
0.723 0.723
E2FA
M06871_2.00
Arabidopsis thaliana
NDDDGGCGCCAWWW

WWWTGGCGCCHHHN
Dap-seq
OMalley et al.(2016)
E2FA_col_a
0.708 0.708
E2FA
M06872_2.00
Arabidopsis thaliana
DDWDGGCGCCAWAD

HTWTGGCGCCHWHH
Dap-seq
OMalley et al.(2016)
E2FA_colamp_a
0.708 0.708
E2FA
M08106_2.00
Arabidopsis thaliana
NVGCGCCAHN

NDTGGCGCBN
ChIP-seq
Mathelier et al.(2014)
MA1414.1
0.708 0.708
ENSACAG00000013716
M01960_2.00
Anolis carolinensis
HNVGCGCBND

HNVGCGCBND
PBM
Weirauch et al.(2014)
pTH9221
0.692 0.692
E2F2
M01963_2.00
Tupaia belangeri
WDVGCGCBHW

WDVGCGCBHW
PBM
Weirauch et al.(2014)
pTH9291
0.692 0.692
E2F3
M01964_2.00
Taeniopygia guttata
NNSGCGCGMN

NKCGCGCSNN
PBM
Weirauch et al.(2014)
pTH9288
0.692 0.692
E2F2
M01961_2.00
Homo sapiens
DNSGCGCSNH

DNSGCGCSNH
PBM
Weirauch et al.(2014)
pTH9195
0.677 0.677
E2f3
M00153_2.00
Mus musculus
NNNNGCGSNN

NNSCGCNNNN
PBM
Badis et al.(2009)
E2F3_3752
0.677 0.677
E2f2
M00154_2.00
Mus musculus
NDNNGCGSBN

NVSCGCNNHN
PBM
Badis et al.(2009)
E2F2_1022
0.677 0.677
ENSOANG00000014967
M01962_2.00
Ornithorhynchus anatinus
NDSGCGCSHN

NDSGCGCSHN
PBM
Weirauch et al.(2014)
pTH9382
0.677 0.677
E2F2
M02949_2.00
Homo sapiens
AAAAATGGCGCCAAAAWD

HWTTTTGGCGCCATTTTT
SELEX
Jolma et al.(2013)
E2F2_1
0.677 0.677
E2F2
M02950_2.00
Homo sapiens
VDTTTTGGCGCCAAAAHN

NDTTTTGGCGCCAAAAHB
SELEX
Jolma et al.(2013)
E2F2_2
0.677 0.677
E2F2
M02951_2.00
Homo sapiens
AAAWWGGCGCCAWTTT

AAAWTGGCGCCWWTTT
SELEX
Jolma et al.(2013)
E2F2_3
0.677 0.677
E2F3
M02956_2.00
Homo sapiens
RAAAAKGGCGCCAAAANN

NNTTTTGGCGCCMTTTTY
SELEX
Jolma et al.(2013)
E2F3_1
0.677 0.677
E2F3
M02957_2.00
Homo sapiens
DAAAADGGCGCCMWWTTY

RAAWWKGGCGCCHTTTTH
SELEX
Jolma et al.(2013)
E2F3_2
0.677 0.677
E2F3
M02958_2.00
Homo sapiens
NDTTTTGGCGCCAAAABH

DVTTTTGGCGCCAAAAHN
SELEX
Jolma et al.(2013)
E2F3_3
0.677 0.677
E2F3
M04701_2.00
Homo sapiens
DWTTTGGCGCCAAAWH

DWTTTGGCGCCAAAWH
SELEX
Yin et al.(2017)
E2F3_eDBD_HT-SELEX
0.677 0.677
E2F2
M04696_2.00
Homo sapiens
GCGCGCGCSYW

WRSGCGCGCGC
SELEX
Yin et al.(2017)
E2F2_eDBD_HT-SELEX_1
0.677 0.677
E2F2
M04697_2.00
Homo sapiens
NDWWDGGCGCCWWHWN

NWDWWGGCGCCHWWHN
SELEX
Yin et al.(2017)
E2F2_eDBD_HT-SELEX_2
0.677 0.677
E2F2
M09029_2.00
Homo sapiens
GGCGCGMAWC

GWTKCGCGCC
Misc
Kulakovskiy et al.(2013)
E2F2_HUMAN.H11MO.0.B
0.677 0.677
E2F3
M09031_2.00
Homo sapiens
NDGGCGGGAAR

YTTCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F3_HUMAN.H11MO.0.A
0.677 0.677
E2f2
M09039_2.00
Mus musculus
GGCGCGMAWC

GWTKCGCGCC
Misc
Kulakovskiy et al.(2013)
E2F2_MOUSE.H11MO.0.B
0.677 0.677
E2f3
M09038_2.00
Mus musculus
DSGCGGGARV

BYTCCCGCSH
Misc
Kulakovskiy et al.(2013)
E2F3_MOUSE.H11MO.0.A
0.677 0.677
E2F3
M10454_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q6_01
0.677 0.677
E2F3
M10455_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F3_Q6
0.677 0.677
E2F3
M04702_2.00
Homo sapiens
DTTTTGGCGCCAAAAH

DTTTTGGCGCCAAAAH
SELEX
Yin et al.(2017)
E2F3_eDBD_Methyl-HT-SELEX
0.677 0.677
E2F2
M04698_2.00
Homo sapiens
SGBGSGCGCGS

SCGCGCSCVCS
SELEX
Yin et al.(2017)
E2F2_eDBD_Methyl-HT-SELEX_1
0.677 0.677
E2F2
M04699_2.00
Homo sapiens
DWWWDGGCGCCAAAWH

DWTTTGGCGCCHWWWH
SELEX
Yin et al.(2017)
E2F2_eDBD_Methyl-HT-SELEX_2
0.677 0.677
efl-1
M08110_2.00
Caenorhabditis elegans
HNHNSGCGSSAAWWN

NWWTTSSCGCSNDND
ChIP-seq
Mathelier et al.(2014)
MA0541.1
0.662 0.662
efl-1
M08197_2.00
Caenorhabditis elegans
BGCGSSAAWW

WWTTSSCGCV
ChIP-seq
Contrino et al.(2012)
Mw140
0.662 0.662
efl-1
M09526_2.00
Caenorhabditis elegans
WGCAARYGCGCTCYA

TRGAGCGCRYTTGCW
Misc
Heinz et al.(2010)
cElegans-L1-EFL1_modEncode
0.662 0.662
E2f
M08196_2.00
Drosophila melanogaster
AAWWBSSCGSCAA

TTGSCGSSVWWTT
ChIP-seq
Contrino et al.(2012)
Mf10
0.631 0.631
E2F1
M02952_2.00
Homo sapiens
WWDGGCGCCAAW

WTTGGCGCCHWW
SELEX
Jolma et al.(2013)
E2F1_1
0.615 0.615
E2F1
M02953_2.00
Homo sapiens
WWKGGCGCCWWW

WWWGGCGCCMWW
SELEX
Jolma et al.(2013)
E2F1_2
0.615 0.615
E2F1
M02954_2.00
Homo sapiens
WWWKGGCGCCMWWW

WWWKGGCGCCMWWW
SELEX
Jolma et al.(2013)
E2F1_3
0.615 0.615
E2F1
M02955_2.00
Homo sapiens
AAWKGGCGCCAWTW

WAWTGGCGCCMWTT
SELEX
Jolma et al.(2013)
E2F1_4
0.615 0.615
E2F1
M04700_2.00
Homo sapiens
NWWWDGGCGCCAAAWH

DWTTTGGCGCCHWWWN
SELEX
Yin et al.(2017)
E2F1_FL_HT-SELEX
0.615 0.615
E2F1
M07938_2.00
Homo sapiens
VRRVNRVGCGSGMDS

SHKCSCGCBYNBYYB
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F1_UCD
0.615 0.615
E2F1
M09030_2.00
Homo sapiens
NVNDGGCGGGARVN

NBYTCCCGCCHNBN
Misc
Kulakovskiy et al.(2013)
E2F1_HUMAN.H11MO.0.A
0.615 0.615
E2f1
M09041_2.00
Mus musculus
NDDGGCGGGRVN

NBYCCCGCCHHN
Misc
Kulakovskiy et al.(2013)
E2F1_MOUSE.H11MO.0.A
0.615 0.615
E2F1
M09521_2.00
Homo sapiens
NNGGCGGGAA

TTCCCGCCNN
Misc
Heinz et al.(2010)
Hela-E2F1_GSE22478
0.615 0.615
E2F1
M10444_2.00
Homo sapiens
THVGCGCGAAAAHKR

YMDTTTTCGCGCBDA
Transfac
Matys et al.(2006)
V$E2F_01
0.615 0.615
E2F1
M10445_2.00
Homo sapiens
BHKSGCGCSAAA

TTTSGCGCSMDV
Transfac
Matys et al.(2006)
V$E2F_03
0.615 0.615
E2F1
M10446_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_01
0.615 0.615
E2F1
M10447_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_02
0.615 0.615
E2F1
M10448_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3_01
0.615 0.615
E2F1
M10449_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3
0.615 0.615
E2F1
M10450_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_01
0.615 0.615
E2F1
M10451_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_02
0.615 0.615
E2F1
M10452_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4
0.615 0.615
E2F1
M10453_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q6
0.615 0.615
GSPATT00020286001
M01965_2.00
Paramecium tetraurelia
NNSGCGSBN

NVSCGCSNN
PBM
Weirauch et al.(2014)
pTH5647
0.585 0.585
E2F6
M08107_2.00
Homo sapiens
DGGMGGGARVN

NBYTCCCKCCH
ChIP-seq
Mathelier et al.(2014)
MA0471.1
0.569 0.569
E2F6
M07939_2.00
Homo sapiens
NDSGCGGGARV

BYTCCCGCSHN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F6_UCD
0.569 0.569
E2F6
M07940_2.00
Homo sapiens
NDVGCGGGARV

BYTCCCGCBHN
ChIP-seq
Gerstein et al.(2012)
K562b_E2F6_UCD
0.569 0.569
E2F6
M07941_2.00
Homo sapiens
NDSGCGGGARV

BYTCCCGCSHN
ChIP-seq
Gerstein et al.(2012)
K562_E2F6_HudsonAlpha
0.569 0.569
E2F6
M09034_2.00
Homo sapiens
NRGGMGGGARRNN

NNYYTCCCKCCYN
Misc
Kulakovskiy et al.(2013)
E2F6_HUMAN.H11MO.0.A
0.569 0.569
E2f6
M09043_2.00
Mus musculus
NDGGCGGGARVV

BBYTCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F6_MOUSE.H11MO.0.A
0.569 0.569
E2F6
M09523_2.00
Homo sapiens
VGCGGGARNN

NNYTCCCGCB
Misc
Heinz et al.(2010)
Hela-E2F6_GSE31477
0.569 0.569
E2F6
M10456_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F6_01
0.569 0.569
E2F
M01959_2.00
Dictyostelium discoideum
NNGSGCGCSHN

NDSGCGCSCNN
PBM
Weirauch et al.(2014)
pTH5403
0.554 0.554
estExt_gwp_GeneWisePlus.C_Chr_02.00010270
M01969_2.00
Ostreococcus tauri
HRVGCGCCNN

NNGGCGCBYD
PBM
Weirauch et al.(2014)
pTH5701
0.538 0.538
efl-2
M01966_2.00
Caenorhabditis elegans
NDBGCGSBNN

NNVSCGCVHN
PBM
Weirauch et al.(2014)
pTH5916
0.446 0.446
efl-2
M00662_2.00
Caenorhabditis elegans
NSGCGSNNDN

NHNNSCGCSN
PBM
Narasimhan et al.(2015)
pTH9173
0.446 0.446
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0001283101-mRNA-1 E2F 226 291

Links

Other E2F family TFs
Other Schistosoma rodhaini TFs

1042 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PPAI006116 Phlebotomus papatasi PPAI006116 N 0.000
ACOM025729 Anopheles coluzzii ACOM025729 N 0.000
ACHR007846 Anopheles christyi ACHR007846 N 0.000
AATE010620 Anopheles atroparvus AATE010620 N 0.000
AARA008073 Anopheles arabiensis AARA008073 N 0.000
AALB005154 Anopheles albimanus AALB005154 N 0.000
LCUP006788 Lucilia cuprina LCUP006788 N 0.000
CLEC003538 Cimex lectularius CLEC003538 N 0.000
Hsal_12949--XP_001121257.1_APIME Harpegnathos saltator Hsal_12949--XP_001121257.1_APIME N 0.000
Cflo_10168--XP_001121257.1_APIME Camponotus floridanus Cflo_10168--XP_001121257.1_APIME N 0.000
YQE_05996 Dendroctonus ponderosae YQE_05996 N 0.000
ACUA011324 Anopheles culicifacies ACUA011324 N 0.000
ADIR007209 Anopheles dirus ADIR007209 N 0.000
AEPI009163 Anopheles epiroticus AEPI009163 N 0.000
MDOA004758 Musca domestica MDOA004758 N 0.000
LLOJ005741 Lutzomyia longipalpis LLOJ005741 N 0.000
ASTEI01417 Anopheles stephensi ASTEI01417 N 0.000
ASIS022980 Anopheles sinensis ASIS022980 N 0.000
AQUA004418 Anopheles quadriannulatus AQUA004418 N 0.000
AMIN010420 Anopheles minimus AMIN010420 N 0.000
AMEM007399 Anopheles merus AMEM007399 N 0.000
AMEC020556 Anopheles melas AMEC020556 N 0.000
AFUN009303 Anopheles funestus AFUN009303 N 0.000
AFAF000142 Anopheles farauti AFAF000142 N 0.000
TC008693 Tribolium castaneum TC008693 N 0.000
SINV17602 Solenopsis invicta SINV17602 N 0.000
NV11270 Nasonia vitripennis NV11270 N 0.000
GG19191 Drosophila erecta FBgn0111397 N 0.000
GF19054 Drosophila ananassae FBgn0096066 N 0.000
CG34422 Drosophila melanogaster FBgn0085451 N 0.000
GA20228 Drosophila pseudoobscura FBgn0080223 N 0.000
CPIJ008611 Culex quinquefasciatus CPIJ008611 N 0.000
BGIBMGA004976 Bombyx mori BGIBMGA004976 N 0.000
AGAP007503 Anopheles gambiae AGAP007503 N 0.000
ADAC007302 Anopheles darlingi ADAC007302 N 0.000
ACEP10253 Atta cephalotes ACEP10253 N 0.000
AAEL018175 Aedes aegypti AAEL018175 N 0.000
GH17861 Drosophila grimshawi FBgn0125330 N 0.000
GI21731 Drosophila mojavensis FBgn0144461 N 0.000
GM18723 Drosophila sechellia FBgn0173628 N 0.000
MCINX003187 Melitaea cinxia MCINX003187 N 0.000
M378DRAFT_479088 Amanita muscaria M378DRAFT_479088 N 0.000
L798_03938 Zootermopsis nevadensis L798_03938 N 0.000
KGM_17418 Danaus plexippus KGM_17418 N 0.000
HMEL004731 Heliconius melpomene HMEL004731 N 0.000
GB42021 Apis mellifera GB42021 N 0.000
GK19784 Drosophila willistoni FBgn0221782 N 0.000
GJ19112 Drosophila virilis FBgn0206257 N 0.000
GD17413 Drosophila simulans FBgn0188968 N 0.000
GM18724 Drosophila sechellia FBgn0173629 N 0.000
CpipJ_CPIJ008611 Culex pipiens CpipJ_CPIJ008611 N 0.000