TELCIR_22846 (Teladorsagia circumcincta)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 TELCIR_22846 T174421_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
E2F8
M02959_2.00
Homo sapiens
TTTGGCGGGAAA

TTTCCCGCCAAA
SELEX
Jolma et al.(2013)
E2F8_1
0.464 0.464
E2F8
M04703_2.00
Homo sapiens
WDKTGGCGGGARNN

NNYTCCCGCCAMHW
SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX
0.464 0.464
E2F8
M04704_2.00
Homo sapiens
WTTTGGCGGGAAWN

NWTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX
0.464 0.464
E2F7
M02960_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Jolma et al.(2013)
E2F7_1
0.452 0.452
E2F7
M04705_2.00
Homo sapiens
WTTTGGCGGGAAAN

NTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX
0.452 0.452
E2F7
M09033_2.00
Homo sapiens
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B
0.452 0.452
E2f7
M09040_2.00
Mus musculus
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C
0.452 0.452
E2F7
M09522_2.00
Homo sapiens
NSGCGSGAAMNN

NNKTTCSCGCSN
Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673
0.452 0.452
E2F7
M04706_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX
0.452 0.452
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TELCIR_22846 E2F 38 106
TELCIR_22846 E2F 195 213

Links

Other E2F family TFs
Other Teladorsagia circumcincta TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACAC_0000024001 Angiostrongylus cantonensis ACAC_0000024001 I 0.607
Alligator_sinensis_CCG013028.1 Alligator sinensis Alligator_sinensis_CCG013028.1 I 0.464
Alligator_sinensis_CCG013028.2 Alligator sinensis Alligator_sinensis_CCG013028.2 I 0.464
ALUE_0000773501 Ascaris lumbricoides ALUE_0000773501 I 0.519
AMSG_04376 Thecamonas trahens AMSG_04376 N 0.440
ANCCAN_04600 Ancylostoma caninum ANCCAN_04600 I 0.607
ASIM_0001001801 Anisakis simplex ASIM_0001001801 I 0.511
ASU_04096 Ascaris suum ASU_04096 I 0.519
augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 I 0.553
Bm4234 Brugia malayi Bm4234 N 0.536
BXY_1693900 Bursaphelenchus xylophilus BXY_1693900 I 0.449
CBG00680 Caenorhabditis briggsae CBG00680 I 0.548
CBN23380 Caenorhabditis brenneri CBN23380 I 0.563
CGOC_0000227901 Cylicostephanus goldi CGOC_0000227901 N 0.508
CJA26768 Caenorhabditis japonica CJA26768 I 0.567
CMT433C Cyanidioschyzon merolae CMT433C I 0.440
CRE01589 Caenorhabditis remanei CRE01589 I 0.556
DICVIV_01764 Dictyocaulus viviparus DICVIV_01764 I 0.593
E2F7 Choloepus hoffmanni ENSCHOG00000004785 I 0.452
E2F7 Oryctolagus cuniculus ENSOCUG00000004932 I 0.452
e2f7.L Xenopus laevis XB-GENE-1018449 I 0.429
E2F8 Anolis carolinensis ENSACAG00000015743 I 0.452
E2F8 Bos taurus ENSBTAG00000017446 I 0.452
E2F8 Gorilla gorilla ENSGGOG00000011430 I 0.464
E2f8 Mus musculus ENSMUSG00000046179 I 0.464
efl-3 Caenorhabditis elegans WBGene00009899 I 0.582
ENSBTAP00000023190-D1 Bos grunniens ENSBTAP00000023190-D1 I 0.452
ENSFALG00000010433 Ficedula albicollis ENSFALG00000010433 I 0.452
ENSLACG00000014031 Latimeria chalumnae ENSLACG00000014031 I 0.440
ENSOANG00000007449 Ornithorhynchus anatinus ENSOANG00000007449 I 0.452
ENSPMAG00000001858 Petromyzon marinus ENSPMAG00000001858 I 0.464
ENSSHAG00000002919 Sarcophilus harrisii ENSSHAG00000002919 I 0.452
gw1.8.144.1 Ostreococcus RCC809 gw1.8.144.1 I 0.452
HCOI01892600 Haemonchus contortus HCOI01892600 I 0.615
HPBE_0000610601 Heligmosomoides bakeri HPBE_0000610601 I 0.622
L596_g12895 Steinernema carpocapsae L596_g12895 I 0.493
L798_00191 Zootermopsis nevadensis L798_00191 I 0.440
L889_g28422 Steinernema feltiae L889_g28422 I 0.798
L892_g1818 Steinernema scapterisci L892_g1818 I 0.798
L893_g19965 Steinernema glaseri L893_g19965 I 0.492
L898_g3621 Steinernema monticolum L898_g3621 I 0.455
LotgiG168338 Lottia gigantea LotgiG168338 I 0.512
maker-nMf.1.1.scaf01659-augustus-gene-0.9 Meloidogyne floridensis maker-nMf.1.1.scaf01659-augustus-gene-0.9 I 0.474
MhA1_Contig130.frz3.gene44 Meloidogyne hapla MhA1_Contig130.frz3.gene44 I 0.474
Minc04041 Meloidogyne incognita Minc04041 I 0.474
Minc05731 Meloidogyne incognita Minc05731 I 0.474
MTR_4g106540 Medicago truncatula MTR_4g106540 I 0.429
nAv.1.0.1.g09262 Acanthocheilonema viteae nAv.1.0.1.g09262 N 0.440
OESDEN_13289 Oesophagostomum dentatum OESDEN_13289 I 0.481
OESDEN_14635 Oesophagostomum dentatum OESDEN_14635 I 0.792
PPA21298 Pristionchus pacificus PPA21298 I 0.493
Pvit_10252 Pogona vitticeps Pvit_10252 I 0.464
scaffold51-EXSNAP2012.35 Pristionchus exspectatus scaffold51-EXSNAP2012.35 I 0.485
scaffold884-EXSNAP2012.1 Pristionchus exspectatus scaffold884-EXSNAP2012.1 I 0.496
SMUV_0000434101 Syphacia muris SMUV_0000434101 I 0.504
TCNE_0000873901 Toxocara canis TCNE_0000873901 I 0.515
TELCIR_03927 Teladorsagia circumcincta TELCIR_03927 I 0.615
TriadG6275 Trichoplax adhaerens TriadG6275 I 0.429