CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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WUBG_00630
(
Wuchereria bancrofti
)
EBF1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF16422 (COE1_DBD)
(none)
WUBG_00630
T174450_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
kn
M03721_2.00
Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV
SELEX
Nitta et al.(2015)
kn_1
0.798
0.798
Ebf4
M10468_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_01
0.793
0.793
EBF3
M10461_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF_Q6
0.793
0.793
Ebf1
M09045_2.00
Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH
Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A
0.788
0.788
Ebf1
M09527_2.00
Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH
Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978
0.788
0.788
EBF4
M10460_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_02
0.788
0.788
Ebf1
M10469_2.00
Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB
Transfac
Matys et al.(2006)
V$OLF1_01
0.788
0.788
Ebf2
M10467_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COE2_01
0.784
0.784
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
WUBG_00630T0
EBF1
2
209
NRVSRFSAQLARAHFEKHPPNNLRKSNFFHFVIALYDRAGQPVEIERTQFADFVEKEREVDGQDTRNGIHYRLWLAYANGLRAEQDLYVRLVDSVSKQAIAYEGQDKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVLGTTARVDGPLLAISDNMFVHNNSKHGRRTKRV
Links
Other
EBF1
family TFs
Other
Wuchereria bancrofti
TFs
284 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy