ENSAMXG00000012646 (Astyanax mexicanus)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) ENSAMXG00000012646 T174488_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.898 0.898
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.898 0.898
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.898 0.898
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.850 0.850
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.748 0.748
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.732 0.732
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.724 0.724
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000013000 EBF1 17 143

Links

Other EBF1 family TFs
Other Astyanax mexicanus TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ebf1b Danio rerio ENSDARG00000069196 I 0.906
EBF1 Equus caballus ENSECAG00000007964 I 0.898
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.898
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.896
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.890
ENSTNIG00000017063 Tetraodon nigroviridis ENSTNIG00000017063 I 0.890
ENSAMXG00000002783 Astyanax mexicanus ENSAMXG00000002783 I 0.882
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.850
EBF3 Echinops telfairi ENSETEG00000014060 I 0.850
ENSMODG00000016695 Monodelphis domestica ENSMODG00000016695 I 0.843
Ogr13832 Ophisaurus gracilis Ogr13832 I 0.843
ENSLACG00000001966 Latimeria chalumnae ENSLACG00000001966 I 0.843
ENSMLUG00000025817 Myotis lucifugus ENSMLUG00000025817 I 0.827
Alligator_sinensis_CCG000599.1 Alligator sinensis Alligator_sinensis_CCG000599.1 I 0.821
Cmyd_10009831 Chelonia mydas Cmyd_10009831 I 0.821
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.819
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.811
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.803
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.803
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.803
HelroG147258 Helobdella robusta HelroG147258 I 0.787
EBF3 Procavia capensis ENSPCAG00000000348 N 0.787
AFUN004907 Anopheles funestus AFUN004907 I 0.769
AARA002866 Anopheles arabiensis AARA002866 I 0.753
MESCA011260 Megaselia scalaris MESCA011260 I 0.747
ENSAMXG00000021198 Astyanax mexicanus ENSAMXG00000021198 I 0.746
ACHR005921 Anopheles christyi ACHR005921 I 0.744
LCUP013861 Lucilia cuprina LCUP013861 I 0.742
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.740
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I 0.740
ENSSTOG00000026314 Ictidomys tridecemlineatus ENSSTOG00000026314 I 0.740
ASTEI11507 Anopheles stephensi ASTEI11507 I 0.734
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.732
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.732
ENSSHAG00000011963 Sarcophilus harrisii ENSSHAG00000011963 I 0.732
Ebf4 Dipodomys ordii ENSDORG00000004139 N 0.732
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.732
ENSMEUG00000009275 Macropus eugenii ENSMEUG00000009275 I 0.732
EBF2 Gallus gallus ENSGALG00000000242 I 0.732
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.732
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.732
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.732
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.732
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.732
ENSCSAG00000016062 Chlorocebus sabaeus ENSCSAG00000016062 I 0.731
SBAD_0000456201 Soboliphyme baturini SBAD_0000456201 I 0.726
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.724
EBF1 Ochotona princeps ENSOPRG00000000119 N 0.724
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.724
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.724
Ebf4 Mus musculus ENSMUSG00000053552 D 0.724
Myotis_brandtii_Ebf2_10005809 Myotis brandtii Myotis_brandtii_Ebf2_10005809 I 0.724
Ogr09591 Ophisaurus gracilis Ogr09591 I 0.717
GH25280 Drosophila grimshawi FBgn0132735 I 0.701
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.701
ebf2.S Xenopus laevis XB-GENE-971141 I 0.701