si:ch211-51e8.2 (Danio rerio)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) ENSDARG00000092635 T174523_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Ebf1
M09045_2.00
Mus musculus
DBYCCCWRGGGAV

BTCCCYWGGGRVH
Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A
0.941 0.941
Ebf1
M09527_2.00
Mus musculus
DBTCCCHDGGGA

TCCCHDGGGAVH
Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978
0.941 0.941
Ebf1
M10469_2.00
Mus musculus
VYMHVYYCYYBRGGGAVTHKHB

VDMDABTCCCYVRRGRRBDKRB
Transfac
Matys et al.(2006)
V$OLF1_01
0.941 0.941
EBF3
M10461_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF_Q6
0.893 0.893
EBF4
M10460_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_02
0.828 0.828
Ebf2
M10467_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COE2_01
0.811 0.811
Ebf4
M10468_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_01
0.811 0.811
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000114469 EBF1 27 195

Links

Other EBF1 family TFs
Other Danio rerio TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ebf1b Danio rerio ENSDARG00000069196 I 1.000
ebf1a Danio rerio ENSDARG00000099849 I 0.976
ENSLACG00000017503 Latimeria chalumnae ENSLACG00000017503 I 0.953
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I 0.953
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.947
EBF1 Oryzias latipes ENSORLG00000007471 I 0.947
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.941
ENSTNIG00000017063 Tetraodon nigroviridis ENSTNIG00000017063 I 0.941
EBF1 Canis familiaris ENSCAFG00000017318 I 0.941
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.941
EBF1 Equus caballus ENSECAG00000007964 I 0.941
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.941
ENSOARG00000012916 Ovis aries ENSOARG00000012916 I 0.941
ENSSSCG00000025433 Sus scrofa ENSSSCG00000025433 I 0.941
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.941
SINV26263 Solenopsis invicta SINV26263 I 0.938
ENSDNOG00000036735 Dasypus novemcinctus ENSDNOG00000036735 I 0.933
ENSMPUG00000013409 Mustela putorius furo ENSMPUG00000013409 I 0.917
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.905
ENSPFOG00000023105 Poecilia formosa ENSPFOG00000023105 I 0.905
EBF1 Oryzias latipes ENSORLG00000002342 I 0.899
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.899
EBF1 Taeniopygia guttata ENSTGUG00000000593 I 0.899
ENSLACG00000001966 Latimeria chalumnae ENSLACG00000001966 I 0.893
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.893
EBF3 Homo sapiens ENSG00000108001 D 0.893
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.893
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.893
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.893
Ebf3 Mus musculus ENSMUSG00000010476 I 0.893
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.893
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.893
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.893
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.893
Ogr13832 Ophisaurus gracilis Ogr13832 I 0.888
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.888
ENSMLUG00000025817 Myotis lucifugus ENSMLUG00000025817 I 0.888
ENSMODG00000016695 Monodelphis domestica ENSMODG00000016695 I 0.888
EBF3 Echinops telfairi ENSETEG00000014060 I 0.888
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.882
ENSACAG00000003052 Anolis carolinensis ENSACAG00000003052 I 0.876
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.864
ebf3a Oryzias latipes ENSORLG00000005870 I 0.864
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.864
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.864
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.864
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.864
ENSPMAG00000003301 Petromyzon marinus ENSPMAG00000003301 I 0.863
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.858
ENSAMXG00000002783 Astyanax mexicanus ENSAMXG00000002783 I 0.858
EBF4 Oryzias latipes ENSORLG00000020414 I 0.858
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.858
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I 0.852
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.846
Cmyd_10009831 Chelonia mydas Cmyd_10009831 I 0.832
Pvit_04283 Pogona vitticeps Pvit_04283 I 0.827
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.822
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.822
ENSSTOG00000026314 Ictidomys tridecemlineatus ENSSTOG00000026314 I 0.817
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.817
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.817
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.817
EBF2 Sus scrofa ENSSSCG00000009655 I 0.817
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.817
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I 0.817
EBF2 Bos taurus ENSBTAG00000040390 I 0.817
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.817
EBF2 Canis familiaris ENSCAFG00000008918 I 0.817
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.817
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.817
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.817
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.817
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.817
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.817
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.817
EBF2 Homo sapiens ENSG00000221818 D 0.817
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.817
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.817
ACYPI060841 Acyrthosiphon pisum ACYPI060841 I 0.813
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.811
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.811
Ebf4 Mus musculus ENSMUSG00000053552 D 0.811
ENSSHAG00000011963 Sarcophilus harrisii ENSSHAG00000011963 I 0.811
EBF1 Tursiops truncatus ENSTTRG00000009929 I 0.811
fgenesh2_pm.scaffold_381000001 Branchiostoma floridae fgenesh2_pm.scaffold_381000001 I 0.808
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.808
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.805
EBF2 Gallus gallus ENSGALG00000000242 I 0.805
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.805
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.805
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.805
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.805
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.805
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.805
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.805
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.799
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.799
Myotis_brandtii_Ebf2_10005809 Myotis brandtii Myotis_brandtii_Ebf2_10005809 I 0.799
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I 0.799
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.799
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.799
Ogr09591 Ophisaurus gracilis Ogr09591 I 0.793
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.793
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I 0.793
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.793
ENSACAG00000005898 Anolis carolinensis ENSACAG00000005898 I 0.792
ENSPTRG00000039291 Pan troglodytes ENSPTRG00000039291 I 0.787
Alligator_sinensis_CCG017610.1 Alligator sinensis Alligator_sinensis_CCG017610.1 I 0.782
SMAR000842 Strigamia maritima SMAR000842 I 0.778
ebf2.S Xenopus laevis XB-GENE-971141 I 0.775
Sakowv30011013m.g Saccoglossus kowalevskii Sakowv30011013m.g I 0.769
LotgiG225788 Lottia gigantea LotgiG225788 I 0.763
ENSCSAG00000016062 Chlorocebus sabaeus ENSCSAG00000016062 I 0.753
AARA002866 Anopheles arabiensis AARA002866 I 0.753
Hsal_03265--XP_394171.3_APIME Harpegnathos saltator Hsal_03265--XP_394171.3_APIME I 0.747
AMEM016790 Anopheles merus AMEM016790 I 0.745
ACOM041538 Anopheles coluzzii ACOM041538 I 0.745
LCUP013861 Lucilia cuprina LCUP013861 I 0.742
ENSOANG00000005673 Ornithorhynchus anatinus ENSOANG00000005673 I 0.740
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.740
ENSAMXG00000021198 Astyanax mexicanus ENSAMXG00000021198 I 0.738
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.734
Myotis_brandtii_Ebf3_10024822 Myotis brandtii Myotis_brandtii_Ebf3_10024822 I 0.734
ENSMEUG00000001579 Macropus eugenii ENSMEUG00000001579 N 0.728
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.728
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.728
ENSGMOG00000010328 Gadus morhua ENSGMOG00000010328 I 0.725
KGM_09934 Danaus plexippus KGM_09934 I 0.722
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.722
HelroG112029 Helobdella robusta HelroG112029 I 0.722
ACYPI50903 Acyrthosiphon pisum ACYPI50903 I 0.719
TRE_0001373801 Trichobilharzia regenti TRE_0001373801 I 0.717
MCINX016127 Melitaea cinxia MCINX016127 I 0.716
EBF4 Echinops telfairi ENSETEG00000015956 I 0.716
EBF4 Procavia capensis ENSPCAG00000011947 I 0.714
D918_06798 Trichuris suis D918_06798 I 0.713
MDOA011385 Musca domestica MDOA011385 I 0.710
ISCW021819 Ixodes scapularis ISCW021819 I 0.710
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I 0.704
ENSSSCG00000025415 Sus scrofa ENSSSCG00000025415 I 0.704
L798_15574 Zootermopsis nevadensis L798_15574 I 0.704
ENSLOCG00000009282 Lepisosteus oculatus ENSLOCG00000009282 I 0.701
GH25280 Drosophila grimshawi FBgn0132735 I 0.701