EBF4 (Gasterosteus aculeatus)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) ENSGACG00000016862 T174558_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.887 0.887
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.887 0.887
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.887 0.887
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.883 0.883
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.848 0.848
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.840 0.840
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.814 0.814
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.710 0.710
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000022272 EBF1 17 247

Links

Other EBF1 family TFs
Other Gasterosteus aculeatus TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSONIG00000004376 Oreochromis niloticus ENSONIG00000004376 I 0.952
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.935
ENSLOCG00000001693 Lepisosteus oculatus ENSLOCG00000001693 I 0.926
EBF1 Takifugu rubripes ENSTRUG00000009320 I 0.896
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I 0.892
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I 0.892
EBF1 Oryzias latipes ENSORLG00000007471 I 0.892
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.892
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.892
ebf1b Danio rerio ENSDARG00000069196 I 0.887
Ebf1 Mus musculus ENSMUSG00000057098 D 0.887
EBF1 Monodelphis domestica ENSMODG00000008198 I 0.887
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.887
ENSLOCG00000009282 Lepisosteus oculatus ENSLOCG00000009282 I 0.887
EBF1 Takifugu rubripes ENSTRUG00000013805 I 0.887
EBF1 Homo sapiens ENSG00000164330 D 0.887
EBF1 Gasterosteus aculeatus ENSGACG00000018450 I 0.887
EBF1 Echinops telfairi ENSETEG00000011711 I 0.887
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.887
ebf1a Danio rerio ENSDARG00000099849 I 0.887
EBF1 Ornithorhynchus anatinus ENSOANG00000012338 I 0.887
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.887
EBF1 Bos taurus ENSBTAG00000037508 I 0.887
EBF1 Callithrix jacchus ENSCJAG00000019016 I 0.887
ENSPPYG00000015995 Pongo abelii ENSPPYG00000015995 I 0.887
EBF1 Pan troglodytes ENSPTRG00000017477 I 0.887
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.883
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.883
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.883
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.883
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.883
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.883
ENSFALG00000008502 Ficedula albicollis ENSFALG00000008502 I 0.883
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.883
EBF1 Gallus gallus ENSGALG00000003699 I 0.883
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.883
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.883
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.883
ebf3.L Xenopus laevis XB-GENE-962547 I 0.883
Ebf3 Mus musculus ENSMUSG00000010476 I 0.883
Pvit_16838 Pogona vitticeps Pvit_16838 I 0.883
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.883
EBF3 Homo sapiens ENSG00000108001 D 0.883
EBF1 Oryzias latipes ENSORLG00000002342 I 0.879
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.879
ENSSSCG00000010757 Sus scrofa ENSSSCG00000010757 I 0.879
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.879
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.879
ENSAMXG00000006585 Astyanax mexicanus ENSAMXG00000006585 I 0.879
EBF1 Canis familiaris ENSCAFG00000017318 I 0.874
EBF1 Cavia porcellus ENSCPOG00000026184 I 0.874
ebf3a Danio rerio ENSDARG00000100244 I 0.874
ENSXMAG00000000489 Xiphophorus maculatus ENSXMAG00000000489 I 0.874
EBF1 Oryctolagus cuniculus ENSOCUG00000008985 I 0.874
EBF4 Monodelphis domestica ENSMODG00000005256 I 0.874
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.866
Aan_R007097 Calypte anna Aan_R007097 I 0.861
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.861
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.861
ENSONIG00000019141 Oreochromis niloticus ENSONIG00000019141 I 0.857
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I 0.857
EBF4 Oryzias latipes ENSORLG00000020414 I 0.857
EBF1 Taeniopygia guttata ENSTGUG00000000593 I 0.853
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.853
ENSGACG00000010053 Gasterosteus aculeatus ENSGACG00000010053 I 0.853
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I 0.848
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.848
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.848
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I 0.848
EBF4 Homo sapiens ENSG00000088881 D 0.848
EBF4 Bos taurus ENSBTAG00000037757 I 0.848
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.848
ebf3a Oryzias latipes ENSORLG00000005870 I 0.848
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.848
EBF4 Otolemur garnettii ENSOGAG00000004688 I 0.848
EBF4 Canis familiaris ENSCAFG00000006631 I 0.848
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I 0.848
EBF3 Cavia porcellus ENSCPOG00000005096 I 0.848
EBF4 Gorilla gorilla ENSGGOG00000015503 I 0.848
EBF4 Myotis lucifugus ENSMLUG00000023832 I 0.848
EBF4 Equus caballus ENSECAG00000010003 I 0.844
ebf3a Takifugu rubripes ENSTRUG00000005721 I 0.844
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.844
Ebf4 Mus musculus ENSMUSG00000053552 D 0.840
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I 0.827
EBF2 Equus caballus ENSECAG00000014179 I 0.823
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.818
EBF2 Homo sapiens ENSG00000221818 D 0.818
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.818
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.818
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.818
EBF2 Bos taurus ENSBTAG00000040390 I 0.818
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.818
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.818
EBF2 Sus scrofa ENSSSCG00000009655 I 0.818
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.818
EBF2 Canis familiaris ENSCAFG00000008918 I 0.818
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.818
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.818
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.818
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.818
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.818
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.818
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.818
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.818
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.818
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.814
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.814
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.814
EBF2 Gallus gallus ENSGALG00000000242 I 0.814
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.814
Ebf2 Mus musculus ENSMUSG00000022053 D 0.814
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.814
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.814
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.814
EBF2 Pteropus vampyrus ENSPVAG00000024254 I 0.814
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.814
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I 0.814
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.814
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.810
ENSLOCG00000015225 Lepisosteus oculatus ENSLOCG00000015225 I 0.810
ebf2.L Xenopus laevis XB-GENE-6252857 I 0.810
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.810
ebf2 Oryzias latipes ENSORLG00000006408 I 0.810
ENSPFOG00000009617 Poecilia formosa ENSPFOG00000009617 I 0.810
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.805
ENSONIG00000013342 Oreochromis niloticus ENSONIG00000013342 I 0.805
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.805
EBF1 Tursiops truncatus ENSTTRG00000009929 I 0.792
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I 0.792
ENSNLEG00000004218 Nomascus leucogenys ENSNLEG00000004218 I 0.792
EBF4 Felis catus ENSFCAG00000014453 I 0.792
ebf2.S Xenopus laevis XB-GENE-971141 I 0.792
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.788
EBF4 Dasypus novemcinctus ENSDNOG00000049548 I 0.784
EBF1 Microcebus murinus ENSMICG00000010036 I 0.784
EBF1 Felis catus ENSFCAG00000008547 I 0.779
EBF1 Equus caballus ENSECAG00000007964 I 0.779
ebf2 Danio rerio ENSDARG00000042525 I 0.779
Alligator_sinensis_CCG006299.1 Alligator sinensis Alligator_sinensis_CCG006299.1 I 0.779
CapteG93575 Capitella teleta CapteG93575 I 0.775
ENSAMEG00000003291 Ailuropoda melanoleuca ENSAMEG00000003291 I 0.771
EBF3 Echinops telfairi ENSETEG00000014060 I 0.771
LotgiG225788 Lottia gigantea LotgiG225788 I 0.766
ENSPANG00000007524 Papio anubis ENSPANG00000007524 I 0.762
CGI_10023990 Crassostrea gigas CGI_10023990 I 0.762
Aan_R009520 Calypte anna Aan_R009520 I 0.758
ENSBTAP00000042518-D1 Bos grunniens ENSBTAP00000042518-D1 I 0.758
EBF4 Sus scrofa ENSSSCG00000007171 I 0.758
Gfo_R004859 Geospiza fortis Gfo_R004859 I 0.758
EBF4 Cavia porcellus ENSCPOG00000004862 I 0.758
EBF4 Oryctolagus cuniculus ENSOCUG00000023917 I 0.758
EBF3 Ornithorhynchus anatinus ENSOANG00000012326 I 0.758
Ebf4 Rattus norvegicus ENSRNOG00000007408 I 0.758
EBF2 Monodelphis domestica ENSMODG00000016702 I 0.753
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.753
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.749
EBF4 Ochotona princeps ENSOPRG00000013703 I 0.749
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.749
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.745
Afo_R002906 Aptenodytes forsteri Afo_R002906 I 0.745
EBF4 Procavia capensis ENSPCAG00000011947 I 0.745
ENSOARG00000005967 Ovis aries ENSOARG00000005967 I 0.745
EBF2 Felis catus ENSFCAG00000003607 I 0.745
KGM_09934 Danaus plexippus KGM_09934 I 0.740
ebf3b Danio rerio ENSDARG00000091287 I 0.740
PHUM119360 Pediculus humanus PHUM119360 I 0.736
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I 0.736
TC001270 Tribolium castaneum TC001270 I 0.736
NV10306 Nasonia vitripennis NV10306 I 0.732
AAEL003436 Aedes aegypti AAEL003436 I 0.732
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.727
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.727
MDOA011385 Musca domestica MDOA011385 I 0.727
HelroG112029 Helobdella robusta HelroG112029 I 0.727
ENSPFOG00000023105 Poecilia formosa ENSPFOG00000023105 I 0.723
TTRE_0000372001 Trichuris trichiura TTRE_0000372001 I 0.723
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.714
D917_06660 Trichinella nativa D917_06660 I 0.710
kn Drosophila melanogaster FBgn0001319 D 0.710
ENSNLEG00000001518 Nomascus leucogenys ENSNLEG00000001518 I 0.710
EFV50386 Trichinella spiralis EFV50386 I 0.710
L798_15574 Zootermopsis nevadensis L798_15574 I 0.710
GG22397 Drosophila erecta FBgn0114569 I 0.710
GE12286 Drosophila yakuba FBgn0230042 I 0.710
GM20182 Drosophila sechellia FBgn0175065 I 0.710
GB42304 Apis mellifera GB42304 I 0.710
GK23295 Drosophila willistoni FBgn0225257 I 0.706
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.706
GF11778 Drosophila ananassae FBgn0088818 I 0.706
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.706
GI21022 Drosophila mojavensis FBgn0143754 I 0.706
GL10656 Drosophila persimilis FBgn0148266 I 0.706
AGAP011437 Anopheles gambiae AGAP011437 I 0.706
GH20479 Drosophila grimshawi FBgn0127942 I 0.701
GJ21945 Drosophila virilis FBgn0209060 I 0.701
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I 0.701