EBF1 (Gasterosteus aculeatus)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) ENSGACG00000018450 T174559_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Ebf1
M09045_2.00
Mus musculus
DBYCCCWRGGGAV

BTCCCYWGGGRVH
Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A
0.935 0.935
Ebf1
M09527_2.00
Mus musculus
DBTCCCHDGGGA

TCCCHDGGGAVH
Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978
0.935 0.935
Ebf1
M10469_2.00
Mus musculus
VYMHVYYCYYBRGGGAVTHKHB

VDMDABTCCCYVRRGRRBDKRB
Transfac
Matys et al.(2006)
V$OLF1_01
0.935 0.935
EBF3
M10461_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF_Q6
0.913 0.913
EBF4
M10460_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_02
0.883 0.883
Ebf4
M10468_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_01
0.879 0.879
Ebf2
M10467_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COE2_01
0.831 0.831
kn
M03721_2.00
Drosophila melanogaster
BWATTCCCHDGGGAATWV

BWATTCCCHDGGGAATWV
SELEX
Nitta et al.(2015)
kn_1
0.740 0.740
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000024394 EBF1 17 247

Links

Other EBF1 family TFs
Other Gasterosteus aculeatus TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL003436 Aedes aegypti AAEL003436 I 0.776
Aan_R007097 Calypte anna Aan_R007097 I 0.892
Aan_R009520 Calypte anna Aan_R009520 I 0.887
Afo_R002906 Aptenodytes forsteri Afo_R002906 I 0.771
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.827
AGAP011437 Anopheles gambiae AGAP011437 I 0.727
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 0.950
Alligator_sinensis_CCG006299.1 Alligator sinensis Alligator_sinensis_CCG006299.1 I 0.805
ASU_01180 Ascaris suum ASU_01180 I 0.757
Bm6296 Brugia malayi Bm6296 I 0.736
CapteG93575 Capitella teleta CapteG93575 I 0.818
CGI_10023990 Crassostrea gigas CGI_10023990 I 0.805
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.913
D917_06660 Trichinella nativa D917_06660 I 0.736
DAPPUDRAFT_22285 Daphnia pulex DAPPUDRAFT_22285 I 0.719
DME_0000265301 Dracunculus medinensis DME_0000265301 I 0.706
EFV50386 Trichinella spiralis EFV50386 I 0.736
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.918
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.836
ENSAMEG00000003291 Ailuropoda melanoleuca ENSAMEG00000003291 I 0.944
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.931
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.879
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.913
ENSAMXG00000006585 Astyanax mexicanus ENSAMXG00000006585 I 0.909
ENSAMXG00000021198 Astyanax mexicanus ENSAMXG00000021198 I 0.722
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.827
ENSAPLG00000015476 Anas platyrhynchos ENSAPLG00000015476 I 0.973
EBF1 Bos taurus ENSBTAG00000037508 I 0.935
EBF4 Bos taurus ENSBTAG00000037757 I 0.883
EBF2 Bos taurus ENSBTAG00000040390 I 0.836
ENSBTAP00000042518-D1 Bos grunniens ENSBTAP00000042518-D1 I 0.818
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I 0.753
EBF4 Canis familiaris ENSCAFG00000006631 I 0.883
EBF2 Canis familiaris ENSCAFG00000008918 I 0.836
EBF1 Canis familiaris ENSCAFG00000017318 I 0.922
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.784
EBF1 Callithrix jacchus ENSCJAG00000019016 I 0.935
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.827
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.779
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.831
EBF4 Cavia porcellus ENSCPOG00000004862 I 0.810
EBF3 Cavia porcellus ENSCPOG00000005096 I 0.879
EBF1 Cavia porcellus ENSCPOG00000026184 I 0.922
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.788
ebf2 Danio rerio ENSDARG00000042525 I 0.797
ebf1b Danio rerio ENSDARG00000069196 I 0.952
ebf3b Danio rerio ENSDARG00000091287 I 0.766
ebf1a Danio rerio ENSDARG00000099849 I 0.957
ebf3a Danio rerio ENSDARG00000100244 I 0.909
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 0.950
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.836
EBF4 Dasypus novemcinctus ENSDNOG00000049548 I 0.818
EBF1 Equus caballus ENSECAG00000007964 I 0.950
EBF4 Equus caballus ENSECAG00000010003 I 0.879
EBF2 Equus caballus ENSECAG00000014179 I 0.831
EBF1 Echinops telfairi ENSETEG00000011711 I 0.935
EBF3 Echinops telfairi ENSETEG00000014060 I 0.766
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.913
ENSFALG00000008502 Ficedula albicollis ENSFALG00000008502 I 0.935
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.827
EBF2 Felis catus ENSFCAG00000003607 I 0.762
EBF1 Felis catus ENSFCAG00000008547 I 0.818
EBF4 Felis catus ENSFCAG00000014453 I 0.827
EBF4 Homo sapiens ENSG00000088881 D 0.883
EBF3 Homo sapiens ENSG00000108001 D 0.913
EBF1 Homo sapiens ENSG00000164330 D 0.935
EBF2 Homo sapiens ENSG00000221818 D 0.836
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.827
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.896
ENSGACG00000010053 Gasterosteus aculeatus ENSGACG00000010053 I 0.892
EBF4 Gasterosteus aculeatus ENSGACG00000016862 I 0.887
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.840
EBF2 Gallus gallus ENSGALG00000000242 I 0.827
EBF1 Gallus gallus ENSGALG00000003699 I 0.935
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.935
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.836
EBF4 Gorilla gorilla ENSGGOG00000015503 I 0.883
ENSGMOG00000010328 Gadus morhua ENSGMOG00000010328 I 0.706
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I 0.978
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I 0.883
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.844
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.931
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.836
ENSLOCG00000001693 Lepisosteus oculatus ENSLOCG00000001693 I 0.918
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.909
ENSLOCG00000009282 Lepisosteus oculatus ENSLOCG00000009282 I 0.944
ENSLOCG00000015225 Lepisosteus oculatus ENSLOCG00000015225 I 0.831
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.827
EBF1 Meleagris gallopavo ENSMGAG00000004896 I 0.973
EBF1 Microcebus murinus ENSMICG00000010036 I 0.823
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.836
EBF4 Myotis lucifugus ENSMLUG00000023832 I 0.883
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.913
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.745
EBF4 Monodelphis domestica ENSMODG00000005256 I 0.918
EBF1 Monodelphis domestica ENSMODG00000008198 I 0.935
EBF2 Monodelphis domestica ENSMODG00000016702 I 0.762
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.836
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I 0.883
Ebf3 Mus musculus ENSMUSG00000010476 I 0.913
Ebf2 Mus musculus ENSMUSG00000022053 D 0.831
Ebf4 Mus musculus ENSMUSG00000053552 D 0.879
Ebf1 Mus musculus ENSMUSG00000057098 D 0.935
ENSNLEG00000001518 Nomascus leucogenys ENSNLEG00000001518 I 0.745
ENSNLEG00000004218 Nomascus leucogenys ENSNLEG00000004218 I 0.840
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.836
EBF3 Ornithorhynchus anatinus ENSOANG00000012326 I 0.775
EBF1 Ornithorhynchus anatinus ENSOANG00000012338 I 0.935
ENSOARG00000005967 Ovis aries ENSOARG00000005967 I 0.805
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.836
EBF1 Oryctolagus cuniculus ENSOCUG00000008985 I 0.922
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.836
EBF4 Oryctolagus cuniculus ENSOCUG00000023917 I 0.784
EBF4 Otolemur garnettii ENSOGAG00000004688 I 0.883
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.913
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.836
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.896
ENSONIG00000004376 Oreochromis niloticus ENSONIG00000004376 I 0.926
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.909
ENSONIG00000013342 Oreochromis niloticus ENSONIG00000013342 I 0.827
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I 0.978
ENSONIG00000019141 Oreochromis niloticus ENSONIG00000019141 I 0.913
EBF4 Ochotona princeps ENSOPRG00000013703 I 0.810
EBF1 Oryzias latipes ENSORLG00000002342 I 0.913
ebf3a Oryzias latipes ENSORLG00000005870 I 0.896
ebf2 Oryzias latipes ENSORLG00000006408 I 0.827
EBF1 Oryzias latipes ENSORLG00000007471 I 0.983
EBF4 Oryzias latipes ENSORLG00000020414 I 0.909
ENSP00000347463 Macaca fascicularis ENSP00000347463 I 0.940
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.766
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.853
ENSPANG00000007524 Papio anubis ENSPANG00000007524 I 0.828
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 0.950
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I 0.853
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.836
EBF4 Procavia capensis ENSPCAG00000011947 I 0.867
EBF1 Procavia capensis ENSPCAG00000013495 I 0.814
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.983
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.909
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I 0.736
ENSPFOG00000009617 Poecilia formosa ENSPFOG00000009617 I 0.831
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.896
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.892
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I 0.883
ENSPPYG00000015995 Pongo abelii ENSPPYG00000015995 I 0.935
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.836
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.913
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.823
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.836
EBF1 Pan troglodytes ENSPTRG00000017477 I 0.935
ENSPTRG00000039291 Pan troglodytes ENSPTRG00000039291 I 0.800
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.805
EBF2 Pteropus vampyrus ENSPVAG00000024254 I 0.831
Ebf4 Rattus norvegicus ENSRNOG00000007408 I 0.814
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.836
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.913
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.935
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.922
EBF4 Sus scrofa ENSSSCG00000007171 I 0.810
EBF2 Sus scrofa ENSSSCG00000009655 I 0.836
ENSSSCG00000010757 Sus scrofa ENSSSCG00000010757 I 0.909
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I 0.831
EBF3 Tupaia belangeri ENSTBEG00000005858 I 0.911
EBF1 Taeniopygia guttata ENSTGUG00000000593 I 0.905
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.827
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.913
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.818
ENSTNIG00000017063 Tetraodon nigroviridis ENSTNIG00000017063 I 0.710
ebf3a Takifugu rubripes ENSTRUG00000005721 I 0.887
EBF1 Takifugu rubripes ENSTRUG00000009320 I 0.987
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.823
EBF1 Takifugu rubripes ENSTRUG00000013805 I 0.935
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.879
EBF1 Tursiops truncatus ENSTTRG00000009929 I 0.840
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.909
ENSXMAG00000000489 Xiphophorus maculatus ENSXMAG00000000489 I 0.909
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.909
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I 0.848
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.896
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.823
kn Drosophila melanogaster FBgn0001319 D 0.740
GF11778 Drosophila ananassae FBgn0088818 I 0.736
GG22397 Drosophila erecta FBgn0114569 I 0.740
GH20479 Drosophila grimshawi FBgn0127942 I 0.732
GI21022 Drosophila mojavensis FBgn0143754 I 0.727
GL10656 Drosophila persimilis FBgn0148266 I 0.736
GM20182 Drosophila sechellia FBgn0175065 I 0.740
GJ21945 Drosophila virilis FBgn0209060 I 0.732
GK23295 Drosophila willistoni FBgn0225257 I 0.736
GE12286 Drosophila yakuba FBgn0230042 I 0.740
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.736
GB42304 Apis mellifera GB42304 I 0.740
Gfo_R004859 Geospiza fortis Gfo_R004859 I 0.887
HelroG112029 Helobdella robusta HelroG112029 I 0.762
HNAJ_0001308901 Hymenolepis nana HNAJ_0001308901 I 0.794
KGM_09934 Danaus plexippus KGM_09934 I 0.758
L596_g20342 Steinernema carpocapsae L596_g20342 I 0.719
L798_15574 Zootermopsis nevadensis L798_15574 I 0.749
L889_g1820 Steinernema feltiae L889_g1820 I 0.719
L893_g31120 Steinernema glaseri L893_g31120 I 0.710
L898_g8304 Steinernema monticolum L898_g8304 I 0.719
LCUP013861 Lucilia cuprina LCUP013861 I 0.731
LOAG_18199 Loa loa LOAG_18199 I 0.736
LotgiG225788 Lottia gigantea LotgiG225788 I 0.801
MDOA011385 Musca domestica MDOA011385 I 0.766
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 0.950
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I 0.857
nAv.1.0.1.g03521 Acanthocheilonema viteae nAv.1.0.1.g03521 I 0.736
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.736
nLs.2.1.2.g08363 Litomosoides sigmodontis nLs.2.1.2.g08363 I 0.745
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.736
NV10306 Nasonia vitripennis NV10306 I 0.749
PHUM119360 Pediculus humanus PHUM119360 I 0.775
PTRK_0001642500 Parastrongyloides trichosuri PTRK_0001642500 I 0.723
Pvit_12046 Pogona vitticeps Pvit_12046 I 0.950
Pvit_16838 Pogona vitticeps Pvit_16838 I 0.909
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.919
SMU15024001 Schmidtea mediterranea SMU15024001 I 0.727
SPAL_0001132500 Strongyloides papillosus SPAL_0001132500 I 0.719
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.788
SSTP_0000472000 Strongyloides stercoralis SSTP_0000472000 I 0.719
SVE_0119400 Strongyloides venezuelensis SVE_0119400 I 0.714
TC001270 Tribolium castaneum TC001270 I 0.766
TTRE_0000372001 Trichuris trichiura TTRE_0000372001 I 0.745
unc-3 Caenorhabditis elegans WBGene00006743 I 0.725
WBGene00240610 Onchocerca volvulus WBGene00240610 I 0.723
WUBG_00630 Wuchereria bancrofti WUBG_00630 I 0.714
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.926
ebf2.L Xenopus laevis XB-GENE-6252857 I 0.823
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.913
ebf3.L Xenopus laevis XB-GENE-962547 I 0.913
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.823
ebf2.S Xenopus laevis XB-GENE-971141 I 0.810