CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000010328
(
Gadus morhua
)
EBF1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF16422 (COE1_DBD)
(none)
ENSGMOG00000010328
T174567_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
EBF1
M02963_2.00
Homo sapiens
DDTCCCWDGGGANT
ANTCCCHWGGGAHH
SELEX
Jolma et al.(2013)
EBF1_1
0.739
0.739
EBF1
M09044_2.00
Homo sapiens
DBYCYCWKGGGAVHN
NDBTCCCMWGRGRVH
Misc
Kulakovskiy et al.(2013)
COE1_HUMAN.H11MO.0.A
0.739
0.739
EBF1
M10462_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COE1_Q6_01
0.739
0.739
EBF1
M10463_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COE1_Q6
0.739
0.739
EBF1
M10464_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF1_04
0.739
0.739
EBF1
M10465_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF1_05
0.739
0.739
Ebf1
M09045_2.00
Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH
Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A
0.725
0.725
Ebf1
M09527_2.00
Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH
Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978
0.725
0.725
Ebf1
M10469_2.00
Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB
Transfac
Matys et al.(2006)
V$OLF1_01
0.725
0.725
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000011054
EBF1
1
125
RSGVALARAHFEKQPPSNLRKSNFFHFVLALYDRQGQPVEIERTSFLGFVEKEKESSGEKTNNGIHYRLQLLYSNGIRTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCXXXXXXX
ENSGMOP00000011054
EBF1
163
204
XXXXXXXVVVSTTVSVEGHVLSVSDNMFVHNNSKHGRRARRL
Links
Other
EBF1
family TFs
Other
Gadus morhua
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy