ENSLACG00000001966 (Latimeria chalumnae)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) ENSLACG00000001966 T174573_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.982 0.982
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.929 0.929
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.929 0.929
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.929 0.929
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.852 0.852
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.852 0.852
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.852 0.852
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000002199 EBF1 27 195

Links

Other EBF1 family TFs
Other Latimeria chalumnae TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSMODG00000016695 Monodelphis domestica ENSMODG00000016695 I 0.976
SINV26263 Solenopsis invicta SINV26263 I 0.958
ENSPMAG00000003301 Petromyzon marinus ENSPMAG00000003301 I 0.935
ENSOARG00000012916 Ovis aries ENSOARG00000012916 I 0.929
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.929
EBF1 Equus caballus ENSECAG00000007964 I 0.929
ENSSSCG00000025433 Sus scrofa ENSSSCG00000025433 I 0.929
ENSMLUG00000025817 Myotis lucifugus ENSMLUG00000025817 I 0.924
ENSDNOG00000036735 Dasypus novemcinctus ENSDNOG00000036735 I 0.921
Ogr13832 Ophisaurus gracilis Ogr13832 I 0.913
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.911
ENSLACG00000017503 Latimeria chalumnae ENSLACG00000017503 I 0.911
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.911
ENSACAG00000003052 Anolis carolinensis ENSACAG00000003052 I 0.906
ENSTNIG00000017063 Tetraodon nigroviridis ENSTNIG00000017063 I 0.905
ENSPFOG00000023105 Poecilia formosa ENSPFOG00000023105 I 0.905
ENSMPUG00000013409 Mustela putorius furo ENSMPUG00000013409 I 0.905
si:ch211-51e8.2 Danio rerio ENSDARG00000092635 I 0.893
ENSOANG00000005673 Ornithorhynchus anatinus ENSOANG00000005673 I 0.879
Myotis_brandtii_Ebf2_10005809 Myotis brandtii Myotis_brandtii_Ebf2_10005809 I 0.877
Pvit_04283 Pogona vitticeps Pvit_04283 I 0.877
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.865
ENSSTOG00000026314 Ictidomys tridecemlineatus ENSSTOG00000026314 I 0.858
Alligator_sinensis_CCG000599.1 Alligator sinensis Alligator_sinensis_CCG000599.1 I 0.858
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.856
ENSSHAG00000011963 Sarcophilus harrisii ENSSHAG00000011963 I 0.852
ENSACAG00000005898 Anolis carolinensis ENSACAG00000005898 I 0.851
ENSAMXG00000012646 Astyanax mexicanus ENSAMXG00000012646 I 0.843
EBF3 Echinops telfairi ENSETEG00000014060 I 0.842
RPRC005513 Rhodnius prolixus RPRC005513 I 0.839
fgenesh2_pm.scaffold_381000001 Branchiostoma floridae fgenesh2_pm.scaffold_381000001 I 0.838
Myotis_brandtii_EBF3_10024821 Myotis brandtii Myotis_brandtii_EBF3_10024821 I 0.837
ACYPI060841 Acyrthosiphon pisum ACYPI060841 I 0.835
Alligator_sinensis_CCG017610.1 Alligator sinensis Alligator_sinensis_CCG017610.1 I 0.833
Ogr09591 Ophisaurus gracilis Ogr09591 I 0.821
ENSPTRG00000039291 Pan troglodytes ENSPTRG00000039291 I 0.819
Myotis_brandtii_Ebf3_10024822 Myotis brandtii Myotis_brandtii_Ebf3_10024822 I 0.812
ENSCSAG00000016062 Chlorocebus sabaeus ENSCSAG00000016062 I 0.806
ENSAMXG00000002783 Astyanax mexicanus ENSAMXG00000002783 I 0.795
PXEA_0001364901 Protopolystoma xenopodis PXEA_0001364901 I 0.789
HelroG147258 Helobdella robusta HelroG147258 I 0.787
SMAR000842 Strigamia maritima SMAR000842 I 0.784
Sakowv30011013m.g Saccoglossus kowalevskii Sakowv30011013m.g I 0.771
ISCW021819 Ixodes scapularis ISCW021819 I 0.771
ENSAMXG00000021198 Astyanax mexicanus ENSAMXG00000021198 I 0.770
AFUN004907 Anopheles funestus AFUN004907 I 0.769
Cmyd_10009831 Chelonia mydas Cmyd_10009831 I 0.768
ENSBTAG00000047164 Bos taurus ENSBTAG00000047164 I 0.762
AMEM016790 Anopheles merus AMEM016790 I 0.758
ACOM041538 Anopheles coluzzii ACOM041538 I 0.758
D918_06798 Trichuris suis D918_06798 I 0.756
AARA002866 Anopheles arabiensis AARA002866 I 0.753
LCUP013861 Lucilia cuprina LCUP013861 I 0.753
EBF4 Echinops telfairi ENSETEG00000015956 I 0.749
ACYPI50903 Acyrthosiphon pisum ACYPI50903 I 0.749
SMTD_0000506201 Schistosoma mattheei SMTD_0000506201 I 0.748
Hsal_03265--XP_394171.3_APIME Harpegnathos saltator Hsal_03265--XP_394171.3_APIME I 0.747
MESCA011260 Megaselia scalaris MESCA011260 I 0.747
ACHR005921 Anopheles christyi ACHR005921 I 0.744
ASTEI11507 Anopheles stephensi ASTEI11507 I 0.734
EBF4 Procavia capensis ENSPCAG00000011947 I 0.730
ENSSSCG00000025415 Sus scrofa ENSSSCG00000025415 I 0.728
HelroG112029 Helobdella robusta HelroG112029 I 0.728
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.727
SBAD_0000456201 Soboliphyme baturini SBAD_0000456201 I 0.726
ENSAMXG00000006585 Astyanax mexicanus ENSAMXG00000006585 I 0.723
MCINX016127 Melitaea cinxia MCINX016127 I 0.722
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.719
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.719
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.719
ebf3.L Xenopus laevis XB-GENE-962547 I 0.719
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.719
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.719
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.719
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.719
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.719
EBF3 Homo sapiens ENSG00000108001 D 0.719
Ebf3 Mus musculus ENSMUSG00000010476 I 0.719
ebf3a Danio rerio ENSDARG00000100244 I 0.719
EBF3 Ornithorhynchus anatinus ENSOANG00000012326 I 0.716
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.714
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.714
ENSSSCG00000010757 Sus scrofa ENSSSCG00000010757 I 0.714
Aan_R007097 Calypte anna Aan_R007097 I 0.712
GH25280 Drosophila grimshawi FBgn0132735 I 0.711
AMEC010301 Anopheles melas AMEC010301 I 0.711
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.702
TRE_0001373801 Trichobilharzia regenti TRE_0001373801 I 0.700