GH25280 (Drosophila grimshawi)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) FBgn0132735 T174736_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
kn
M03721_2.00
Drosophila melanogaster
BWATTCCCHDGGGAATWV

BWATTCCCHDGGGAATWV
SELEX
Nitta et al.(2015)
kn_1
0.918 0.918
Ebf1
M09045_2.00
Mus musculus
DBYCCCWRGGGAV

BTCCCYWGGGRVH
Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A
0.722 0.722
Ebf1
M09527_2.00
Mus musculus
DBTCCCHDGGGA

TCCCHDGGGAVH
Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978
0.722 0.722
Ebf1
M10469_2.00
Mus musculus
VYMHVYYCYYBRGGGAVTHKHB

VDMDABTCCCYVRRGRRBDKRB
Transfac
Matys et al.(2006)
V$OLF1_01
0.722 0.722
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0159186 EBF1 1 97

Links

Other EBF1 family TFs
Other Drosophila grimshawi TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ERF043 Arabidopsis thaliana AT4G32800 D 0.000
TINY Arabidopsis thaliana AT5G25810 D 0.000
Ciclev10009370m.g Citrus clementina Ciclev10009370m.g I 0.000
mgf022971m Mimulus guttatus mgf022971m I 0.000
Cucsa.259750 Cucumis sativus Cucsa.259750 I 0.000
Cucsa.161310 Cucumis sativus Cucsa.161310 I 0.000
Cucsa.038760 Cucumis sativus Cucsa.038760 I 0.000
cassava19912.m1 Manihot esculenta cassava19912.m1 I 0.000
cassava19875.m1 Manihot esculenta cassava19875.m1 I 0.000
cassava18256.valid.m1 Manihot esculenta cassava18256.valid.m1 I 0.000
cassava17185.m1 Manihot esculenta cassava17185.m1 I 0.000
cassava15622.m1 Manihot esculenta cassava15622.m1 I 0.000
30146.m003535 Ricinus communis 30146.m003535 I 0.000
mgf024703m Mimulus guttatus mgf024703m I 0.000
mgf024816m Mimulus guttatus mgf024816m I 0.000
mgf026339m Mimulus guttatus mgf026339m I 0.000
Carubv10014506m.g Capsella rubella Carubv10014506m.g I 0.000
Carubv10006567m.g Capsella rubella Carubv10006567m.g I 0.000
Carubv10003136m.g Capsella rubella Carubv10003136m.g I 0.000
Carubv10002601m.g Capsella rubella Carubv10002601m.g I 0.000
Cagra.6624s0013 Capsella grandiflora Cagra.6624s0013 I 0.000
Cagra.4093s0009 Capsella grandiflora Cagra.4093s0009 I 0.000
Bostr.7867s1130 Boechera stricta Bostr.7867s1130 I 0.000
Bostr.29827s0238 Boechera stricta Bostr.29827s0238 I 0.000
Bostr.20055s0079 Boechera stricta Bostr.20055s0079 I 0.000
Aquca_011_00566 Aquilegia coerulea Aquca_011_00566 I 0.000
29794.m003381 Ricinus communis 29794.m003381 I 0.000
Pm023417 Prunus mume Pm023417 I 0.000
Pm013463 Prunus mume Pm013463 I 0.000
VIT_00s0632g00010 Vitis vinifera VIT_00s0632g00010 I 0.000
VIT_00s0341g00080 Vitis vinifera VIT_00s0341g00080 I 0.000
VIT_00s0341g00070 Vitis vinifera VIT_00s0341g00070 I 0.000
Traes_6DL_3019F176A Triticum aestivum Traes_6DL_3019F176A I 0.000
Traes_2DL_A336122501 Triticum aestivum Traes_2DL_A336122501 I 0.000
Traes_2BL_FC0F8A3DC Triticum aestivum Traes_2BL_FC0F8A3DC I 0.000
Traes_2BL_593E1CCC2 Triticum aestivum Traes_2BL_593E1CCC2 I 0.000
Traes_2AL_45E6314EF Triticum aestivum Traes_2AL_45E6314EF I 0.000
Traes_2AL_43491B9E0 Triticum aestivum Traes_2AL_43491B9E0 I 0.000
TCM_037194 Theobroma cacao TCM_037194 I 0.000
VIT_04s0008g03400 Vitis vinifera VIT_04s0008g03400 I 0.000
VIT_11s0016g03350 Vitis vinifera VIT_11s0016g03350 I 0.000
VIT_15s0021g02110 Vitis vinifera VIT_15s0021g02110 I 0.000
Pm005151 Prunus mume Pm005151 I 0.000
Cla022553 Citrullus lanatus Cla022553 I 0.000
Cla021417 Citrullus lanatus Cla021417 I 0.000
Cla015715 Citrullus lanatus Cla015715 I 0.000
Cla012859 Citrullus lanatus Cla012859 I 0.000
Ca_28185 Cicer arietinum Ca_28185 I 0.000
Ca_18948 Cicer arietinum Ca_18948 I 0.000
Ca_17883 Cicer arietinum Ca_17883 I 0.000
Ca_14911 Cicer arietinum Ca_14911 I 0.000
Ca_01908 Cicer arietinum Ca_01908 I 0.000
TCM_028851 Theobroma cacao TCM_028851 I 0.000
Ciclev10027587m.g Citrus clementina Ciclev10027587m.g I 0.000
LjT43F20.80.nd Lotus japonicus LjT43F20.80.nd I 0.000
Pavir.J17742 Panicum virgatum Pavir.J17742 I 0.000
Pavir.Gb01128 Panicum virgatum Pavir.Gb01128 I 0.000
Pavir.Ga01095 Panicum virgatum Pavir.Ga01095 I 0.000
Pavir.Ga01093 Panicum virgatum Pavir.Ga01093 I 0.000
orange1.1g038538m.g Citrus sinensis orange1.1g038538m.g I 0.000
orange1.1g027107m.g Citrus sinensis orange1.1g027107m.g I 0.000
MDP0000790788 Malus domestica MDP0000790788 I 0.000
MDP0000652413 Malus domestica MDP0000652413 I 0.000
MDP0000242611 Malus domestica MDP0000242611 I 0.000
MDP0000241650 Malus domestica MDP0000241650 I 0.000
SapurV1A.0291s0070 Salix purpurea SapurV1A.0291s0070 I 0.000
Thhalv10004870m.g Eutrema salsugineum Thhalv10004870m.g I 0.000
Thhalv10006200m.g Eutrema salsugineum Thhalv10006200m.g I 0.000
LjT33K05.60.nd Lotus japonicus LjT33K05.60.nd I 0.000
LjSGA_100683.2.1 Lotus japonicus LjSGA_100683.2.1 I 0.000
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.000
chr1.LjT23O20.60.nd Lotus japonicus chr1.LjT23O20.60.nd I 0.000
chr1.CM0171.140.nc Lotus japonicus chr1.CM0171.140.nc I 0.000
PK28082.1 Cannabis sativa PK28082.1 I 0.000
PK01156.1 Cannabis sativa PK01156.1 I 0.000
Thhalv10026204m.g Eutrema salsugineum Thhalv10026204m.g I 0.000
Thhalv10022278m.g Eutrema salsugineum Thhalv10022278m.g I 0.000
Thhalv10015895m.g Eutrema salsugineum Thhalv10015895m.g I 0.000
MDP0000174352 Malus domestica MDP0000174352 I 0.000
MDP0000148178 Malus domestica MDP0000148178 I 0.000
Lus10043240.g Linum usitatissimum Lus10043240.g I 0.000
gene25758-v1.0-hybrid Fragaria vesca gene25758-v1.0-hybrid I 0.000
gene08876-v1.0-hybrid Fragaria vesca gene08876-v1.0-hybrid I 0.000
gene08873-v1.0-hybrid Fragaria vesca gene08873-v1.0-hybrid I 0.000
gene08838-v1.0-hybrid Fragaria vesca gene08838-v1.0-hybrid I 0.000
evm.TU.supercontig_7.269 Carica papaya evm.TU.supercontig_7.269 I 0.000
evm.TU.supercontig_40.39 Carica papaya evm.TU.supercontig_40.39 I 0.000
Eucgr.F03062 Eucalyptus grandis Eucgr.F03062 I 0.000
Eucgr.E01593 Eucalyptus grandis Eucgr.E01593 I 0.000
Eucgr.D02102 Eucalyptus grandis Eucgr.D02102 I 0.000
Eucgr.C02928 Eucalyptus grandis Eucgr.C02928 I 0.000
Gorai.003G063500 Gossypium raimondii Gorai.003G063500 I 0.000
Gorai.004G289800 Gossypium raimondii Gorai.004G289800 I 0.000
Gorai.009G050200 Gossypium raimondii Gorai.009G050200 I 0.000
Lus10038607.g Linum usitatissimum Lus10038607.g I 0.000
Lus10038270.g Linum usitatissimum Lus10038270.g I 0.000
Lus10034949.g Linum usitatissimum Lus10034949.g I 0.000
Lus10025834.g Linum usitatissimum Lus10025834.g I 0.000
Lus10011123.g Linum usitatissimum Lus10011123.g I 0.000
Lus10007799.g Linum usitatissimum Lus10007799.g I 0.000
Lus10004738.g Linum usitatissimum Lus10004738.g I 0.000
Lus10002801.g Linum usitatissimum Lus10002801.g I 0.000
Lus10001601.g Linum usitatissimum Lus10001601.g I 0.000
Gorai.010G106600 Gossypium raimondii Gorai.010G106600 I 0.000
Eucgr.C00546 Eucalyptus grandis Eucgr.C00546 I 0.000
MTR_6g088405 Medicago truncatula MTR_6g088405 I 0.000
GLYMA14G22740 Glycine max GLYMA14G22740 I 0.000
GLYMA13G43210 Glycine max GLYMA13G43210 I 0.000
GLYMA09G32730 Glycine max GLYMA09G32730 I 0.000
GLYMA07G14560 Glycine max GLYMA07G14560 I 0.000
GLYMA07G02001 Glycine max GLYMA07G02001 I 0.000
GLYMA06G08990 Glycine max GLYMA06G08990 I 0.000
GLYMA04G08901 Glycine max GLYMA04G08901 I 0.000
GLYMA03G27050 Glycine max GLYMA03G27050 I 0.000
GLYMA01G35010 Glycine max GLYMA01G35010 I 0.000
TINY2 Arabidopsis lyrata fgenesh2_kg.6__1130__AT5G11590.1 I 0.000
GLYMA15G02130 Glycine max GLYMA15G02130 I 0.000
GLYMA17G27520 Glycine max GLYMA17G27520 I 0.000
GRMZM2G172936 Zea mays GRMZM2G172936 I 0.000
MTR_3g110205 Medicago truncatula MTR_3g110205 I 0.000
MTR_2g101340 Medicago truncatula MTR_2g101340 I 0.000
MTR_1g006660 Medicago truncatula MTR_1g006660 I 0.000
MLOC_3095 Hordeum vulgare MLOC_3095 I 0.000
LPERR04G16900 Leersia perrieri LPERR04G16900 I 0.000
LPERR02G21590 Leersia perrieri LPERR02G21590 I 0.000
GSMUA_Achr7G09450_001 Musa acuminata GSMUA_Achr7G09450_001 I 0.000
GSMUA_Achr1G01620_001 Musa acuminata GSMUA_Achr1G01620_001 I 0.000
GSMUA_Achr10G27680_001 Musa acuminata GSMUA_Achr10G27680_001 I 0.000
GSMUA_Achr10G21470_001 Musa acuminata GSMUA_Achr10G21470_001 I 0.000
F775_04501 Aegilops tauschii F775_04501 I 0.000
BRADI5G17640 Brachypodium distachyon BRADI5G17640 I 0.000
BRADI3G50630 Brachypodium distachyon BRADI3G50630 I 0.000
Bo7g115860 Brassica oleracea Bo7g115860 I 0.000
Bo7g095710 Brassica oleracea Bo7g095710 I 0.000
Bo6g077080 Brassica oleracea Bo6g077080 I 0.000
Bo3g171090 Brassica oleracea Bo3g171090 I 0.000
Bo2g010530 Brassica oleracea Bo2g010530 I 0.000
Bo1g009990 Brassica oleracea Bo1g009990 I 0.000
BGIOSGA016884 Oryza indica BGIOSGA016884 I 0.000
BGIOSGA016882 Oryza indica BGIOSGA016882 I 0.000
DREB3 Arabidopsis thaliana AT5G11590 I 0.000
AMTR_s00111p00051610 Amborella trichopoda AMTR_s00111p00051610 I 0.000
Bo8g095240 Brassica oleracea Bo8g095240 I 0.000
Bo9g011210 Brassica oleracea Bo9g011210 I 0.000
Bo9g170060 Brassica oleracea Bo9g170060 I 0.000
BRADI3G50620 Brachypodium distachyon BRADI3G50620 I 0.000
Bra037041 Brassica rapa Bra037041 I 0.000
Bra036552 Brassica rapa Bra036552 I 0.000
Bra034535 Brassica rapa Bra034535 I 0.000
Bra023332 Brassica rapa Bra023332 I 0.000
Bra011383 Brassica rapa Bra011383 I 0.000
Bra009862 Brassica rapa Bra009862 I 0.000
Bra008952 Brassica rapa Bra008952 I 0.000
Bra007539 Brassica rapa Bra007539 I 0.000
Bra003415 Brassica rapa Bra003415 I 0.000
AMTR_s00056p00064760 Amborella trichopoda AMTR_s00056p00064760 I 0.000
MTR_6g088425 Medicago truncatula MTR_6g088425 I 0.000
Solyc08g078420.1 Solanum lycopersicum Solyc08g078420.1 I 0.000
PRUPE_ppa010340mg Prunus persica PRUPE_ppa010340mg I 0.000
PRUPE_ppa009533mg Prunus persica PRUPE_ppa009533mg I 0.000
PGSC0003DMG400026035 Solanum tuberosum PGSC0003DMG400026035 I 0.000
PGSC0003DMG400018581 Solanum tuberosum PGSC0003DMG400018581 I 0.000
PGSC0003DMG400012087 Solanum tuberosum PGSC0003DMG400012087 I 0.000
PGSC0003DMG400007025 Solanum tuberosum PGSC0003DMG400007025 I 0.000
PGSC0003DMG400004826 Solanum tuberosum PGSC0003DMG400004826 I 0.000
PGSC0003DMG400004825 Solanum tuberosum PGSC0003DMG400004825 I 0.000
PGSC0003DMG400002235 Solanum tuberosum PGSC0003DMG400002235 I 0.000
OS04G0550200 Oryza sativa OS04G0550200 I 0.000
PRUPE_ppa011735mg Prunus persica PRUPE_ppa011735mg I 0.000
Sb06g024530 Sorghum bicolor Sb06g024530 I 0.000
scaffold_301905.1 Arabidopsis lyrata scaffold_301905.1 I 0.000
Solyc08g078410.1 Solanum lycopersicum Solyc08g078410.1 I 0.000
Solyc08g066660.1 Solanum lycopersicum Solyc08g066660.1 I 0.000
Solyc06g066540.1 Solanum lycopersicum Solyc06g066540.1 I 0.000
Solyc05g050830.1 Solanum lycopersicum Solyc05g050830.1 I 0.000
Solyc01g090560.2 Solanum lycopersicum Solyc01g090560.2 I 0.000
Si012254m.g Setaria italica Si012254m.g I 0.000
Si010703m.g Setaria italica Si010703m.g I 0.000
SELMODRAFT_125385 Selaginella moellendorffii SELMODRAFT_125385 I 0.000
SELMODRAFT_104978 Selaginella moellendorffii SELMODRAFT_104978 I 0.000
scaffold_700899.1 Arabidopsis lyrata scaffold_700899.1 I 0.000
OS04G0549700 Oryza sativa OS04G0549700 I 0.000
OS02G0657000 Oryza sativa OS02G0657000 I 0.000
OS02G0656600 Oryza sativa OS02G0656600 I 0.000
ONIVA02G28960 Oryza nivara ONIVA02G28960 I 0.000
OMERI04G17290 Oryza meridionalis OMERI04G17290 I 0.000
OMERI04G17260 Oryza meridionalis OMERI04G17260 I 0.000
OMERI02G25910 Oryza meridionalis OMERI02G25910 I 0.000
OMERI02G25900 Oryza meridionalis OMERI02G25900 I 0.000
OGLUM04G20790 Oryza glumaepatula OGLUM04G20790 I 0.000
OGLUM04G20750 Oryza glumaepatula OGLUM04G20750 I 0.000
OGLUM02G27070 Oryza glumaepatula OGLUM02G27070 I 0.000
OGLUM02G27010 Oryza glumaepatula OGLUM02G27010 I 0.000
MTR_8g013860 Medicago truncatula MTR_8g013860 I 0.000
ONIVA02G28990 Oryza nivara ONIVA02G28990 I 0.000
ONIVA04G19040 Oryza nivara ONIVA04G19040 I 0.000
ONIVA04G19090 Oryza nivara ONIVA04G19090 I 0.000
ORUFI04G22430 Oryza rufipogon ORUFI04G22430 I 0.000
ORUFI04G22400 Oryza rufipogon ORUFI04G22400 I 0.000
ORUFI02G28010 Oryza rufipogon ORUFI02G28010 I 0.000
ORGLA04G0179000 Oryza glaberrima ORGLA04G0179000 I 0.000
ORGLA04G0178600 Oryza glaberrima ORGLA04G0178600 I 0.000
ORGLA02G0228000 Oryza glaberrima ORGLA02G0228000 I 0.000
OPUNC04G18530 Oryza punctata OPUNC04G18530 I 0.000
OPUNC04G18500 Oryza punctata OPUNC04G18500 I 0.000
OPUNC02G24230 Oryza punctata OPUNC02G24230 I 0.000
OPUNC02G24210 Oryza punctata OPUNC02G24210 I 0.000
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.000