unc-3 (Caenorhabditis elegans)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) WBGene00006743 T174782_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
kn
M03721_2.00
Drosophila melanogaster
BWATTCCCHDGGGAATWV

BWATTCCCHDGGGAATWV
SELEX
Nitta et al.(2015)
kn_1
0.730 0.730
Ebf1
M09045_2.00
Mus musculus
DBYCCCWRGGGAV

BTCCCYWGGGRVH
Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A
0.730 0.730
Ebf1
M09527_2.00
Mus musculus
DBTCCCHDGGGA

TCCCHDGGGAVH
Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978
0.730 0.730
Ebf1
M10469_2.00
Mus musculus
VYMHVYYCYYBRGGGAVTHKHB

VDMDABTCCCYVRRGRRBDKRB
Transfac
Matys et al.(2006)
V$OLF1_01
0.730 0.730
EBF4
M10460_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_02
0.721 0.721
Ebf4
M10468_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_01
0.716 0.716
EBF3
M10461_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF_Q6
0.716 0.716
Ebf2
M10467_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COE2_01
0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Y16B4A.1 EBF1 27 250

Links

Other EBF1 family TFs
Other Caenorhabditis elegans TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
6438_YER111C Saccharomyces mikatae 6438_YER111C I 0.000
6569_YER111C Saccharomyces paradoxus 6569_YER111C I 0.000
6809_YER111C Saccharomyces bayanus 6809_YER111C I 0.000
AACERI_AaceriAGL297C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL297C N 0.000
AGOS_AGL297C Ashbya gossypii AGOS_AGL297C N 0.000
Ecym_7145 Eremothecium cymbalariae Ecym_7145 N 0.000
KAFR_0K01930 Kazachstania africana KAFR_0K01930 I 0.000
KLTH0C06270g Kluyveromyces thermotolerans KLTH0C06270g N 0.000
Kwal_10756 Kluyveromyces waltii Kwal_10756 I 0.000
LALA0_S01e06304g Lachancea lanzarotensis LALA0_S01e06304g I 0.000
NCAS_0A14500 Naumovozyma castellii NCAS_0A14500 N 0.000
SAKL0F12870g Lachancea kluyveri SAKL0F12870g I 0.000
Scas_Contig510.2 Saccharomyces castellii Scas_Contig510.2 N 0.000
TDEL_0C02690 Torulaspora delbrueckii TDEL_0C02690 I 0.000
ZBAI_00748 Zygosaccharomyces bailii ZBAI_00748 I 0.000
ZBAI_06045 Zygosaccharomyces bailii ZBAI_06045 I 0.000
ZYRO0B03740g Zygosaccharomyces rouxii ZYRO0B03740g I 0.000