Afo_R002906 (Aptenodytes forsteri)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) Afo_R002906 T174791_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
EBF3
M10461_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF_Q6
0.891 0.891
Ebf1
M09045_2.00
Mus musculus
DBYCCCWRGGGAV

BTCCCYWGGGRVH
Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A
0.842 0.842
Ebf1
M09527_2.00
Mus musculus
DBTCCCHDGGGA

TCCCHDGGGAVH
Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978
0.842 0.842
Ebf1
M10469_2.00
Mus musculus
VYMHVYYCYYBRGGGAVTHKHB

VDMDABTCCCYVRRGRRBDKRB
Transfac
Matys et al.(2006)
V$OLF1_01
0.842 0.842
Ebf2
M10467_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COE2_01
0.796 0.796
Ebf4
M10468_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_01
0.769 0.769
EBF4
M10460_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_02
0.769 0.769
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R002906 EBF1 17 238

Links

Other EBF1 family TFs
Other Aptenodytes forsteri TFs

215 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL014286 Aedes aegypti AAEL014286 I 0.000
AALB001524 Anopheles albimanus AALB001524 I 0.000
ADAC005010 Anopheles darlingi ADAC005010 I 0.000
CPIJ004862 Culex quinquefasciatus CPIJ004862 I 0.000
CpipJ_CPIJ004862 Culex pipiens CpipJ_CPIJ004862 I 0.000
GD24674 Drosophila simulans FBgn0196001 I 0.000
GE16012 Drosophila yakuba FBgn0233564 I 0.000
GF19984 Drosophila ananassae FBgn0096991 I 0.000
GG19364 Drosophila erecta FBgn0111568 I 0.000
GH11855 Drosophila grimshawi FBgn0119334 I 0.000
GI14170 Drosophila mojavensis FBgn0136923 I 0.000
GJ18431 Drosophila virilis FBgn0205590 I 0.000
GK16252 Drosophila willistoni FBgn0218254 I 0.000
GL24710 Drosophila persimilis FBgn0162298 I 0.000
GM22518 Drosophila sechellia FBgn0177388 I 0.000
HMEL017165 Heliconius melpomene HMEL017165 I 0.000
LCUP002256 Lucilia cuprina LCUP002256 I 0.000
LLOJ006683 Lutzomyia longipalpis LLOJ006683 I 0.000
MDOA009261 Musca domestica MDOA009261 I 0.000
Myb Drosophila melanogaster FBgn0002914 D 0.000
PPAI005590 Phlebotomus papatasi PPAI005590 I 0.000