CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cflo_00078--XP_394171.3_APIME
(
Camponotus floridanus
)
EBF1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF16422 (COE1_DBD)
(none)
Cflo_00078--XP_394171.3_APIME
T174803_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
kn
M03721_2.00
Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV
SELEX
Nitta et al.(2015)
kn_1
0.711
0.711
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cflo_00078--XP_394171.3_APIME
EBF1
13
192
AWPQPALADNGTVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRHGQPIEIERTSFMGFVEKDQESEGPKTNNGIQYSLHLLYSNGVRQVQDIYVRLIDSATKQAIMYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDREQQFDIISPSIDRNMMASIDDRRIARTVL
Links
Other
EBF1
family TFs
Other
Camponotus floridanus
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy