CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10009831
(
Chelonia mydas
)
EBF1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF16422 (COE1_DBD)
(none)
Cmyd_10009831
T174805_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Ebf1
M09045_2.00
Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH
Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A
0.853
0.853
Ebf1
M09527_2.00
Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH
Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978
0.853
0.853
Ebf1
M10469_2.00
Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB
Transfac
Matys et al.(2006)
V$OLF1_01
0.853
0.853
EBF3
M10461_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF_Q6
0.779
0.779
EBF4
M10460_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_02
0.705
0.705
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10009831
EBF1
3
97
EEPLGAGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPSNLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKHLIGHQYHIPTAFR
Links
Other
EBF1
family TFs
Other
Chelonia mydas
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EBF1
Equus caballus
ENSECAG00000007964
I
0.853
EBF1
Loxodonta africana
ENSLAFG00000017522
I
0.853
ENSNLEG00000004218
Nomascus leucogenys
ENSNLEG00000004218
I
0.853
EBF1
Taeniopygia guttata
ENSTGUG00000000593
I
0.853
EBF1
Gorilla gorilla
ENSGGOG00000000033
I
0.853
ENSMEUG00000001579
Macropus eugenii
ENSMEUG00000001579
N
0.853
EBF1
Canis familiaris
ENSCAFG00000017318
I
0.853
ebf1a
Danio rerio
ENSDARG00000099849
I
0.853
ENSAMEG00000006442
Ailuropoda melanoleuca
ENSAMEG00000006442
I
0.853
EBF1
Tursiops truncatus
ENSTTRG00000009929
I
0.853
ENSMPUG00000013409
Mustela putorius furo
ENSMPUG00000013409
I
0.853
EBF1
Erinaceus europaeus
ENSEEUG00000004482
N
0.842
ebf4
Xenopus tropicalis
XB-GENE-6030626
I
0.832
EBF1
Oryzias latipes
ENSORLG00000007471
I
0.832
ENSPFOG00000000294
Poecilia formosa
ENSPFOG00000000294
I
0.832
ENSONIG00000017655
Oreochromis niloticus
ENSONIG00000017655
I
0.832
ebf1b
Danio rerio
ENSDARG00000069196
I
0.832
si:ch211-51e8.2
Danio rerio
ENSDARG00000092635
I
0.832
ENSTNIG00000017063
Tetraodon nigroviridis
ENSTNIG00000017063
I
0.832
ENSAMXG00000012646
Astyanax mexicanus
ENSAMXG00000012646
I
0.821
ENSGMOG00000015541
Gadus morhua
ENSGMOG00000015541
I
0.821
EBF1
Takifugu rubripes
ENSTRUG00000009320
I
0.821
EBF3
Ornithorhynchus anatinus
ENSOANG00000012326
I
0.779
EBF3
Taeniopygia guttata
ENSTGUG00000011600
I
0.779
Cmyd_10020950
Chelonia mydas
Cmyd_10020950
I
0.779
ENSMODG00000016695
Monodelphis domestica
ENSMODG00000016695
I
0.779
Ebf3
Rattus norvegicus
ENSRNOG00000016102
I
0.779
ENSPSIG00000016691
Pelodiscus sinensis
ENSPSIG00000016691
I
0.779
EBF3
Otolemur garnettii
ENSOGAG00000007572
I
0.779
Ebf3
Mus musculus
ENSMUSG00000010476
I
0.779
ENSFALG00000001212
Ficedula albicollis
ENSFALG00000001212
I
0.779
EBF3
Macaca mulatta
ENSMMUG00000011447
I
0.779
EBF3
Homo sapiens
ENSG00000108001
D
0.779
EBF3
Echinops telfairi
ENSETEG00000014060
I
0.779
ENSLACG00000001966
Latimeria chalumnae
ENSLACG00000001966
I
0.768
EBF3
Tursiops truncatus
ENSTTRG00000014010
I
0.768
ENSLOCG00000007615
Lepisosteus oculatus
ENSLOCG00000007615
I
0.768
ENSPANG00000020188
Papio anubis
ENSPANG00000020188
I
0.768
Ogr13832
Ophisaurus gracilis
Ogr13832
I
0.768
EBF3
Anolis carolinensis
ENSACAG00000008590
I
0.768
Ebf1
Rattus norvegicus
ENSRNOG00000028845
I
0.764
ENSSHAG00000017239
Sarcophilus harrisii
ENSSHAG00000017239
I
0.747
ENSAMXG00000003402
Astyanax mexicanus
ENSAMXG00000003402
I
0.747
ENSMLUG00000025817
Myotis lucifugus
ENSMLUG00000025817
I
0.747
EBF1
Oryzias latipes
ENSORLG00000002342
I
0.726
ENSONIG00000008631
Oreochromis niloticus
ENSONIG00000008631
I
0.726
ENSPPYG00000002766
Pongo abelii
ENSPPYG00000002766
I
0.726
ENSXMAG00000012715
Xiphophorus maculatus
ENSXMAG00000012715
I
0.716
ENSPFOG00000017183
Poecilia formosa
ENSPFOG00000017183
I
0.716
ebf3a
Oryzias latipes
ENSORLG00000005870
I
0.716
EBF4
Oryctolagus cuniculus
ENSOCUG00000023917
I
0.716
ENSACAG00000003052
Anolis carolinensis
ENSACAG00000003052
I
0.716
ENSONIG00000000451
Oreochromis niloticus
ENSONIG00000000451
I
0.716
ENSXMAG00000006633
Xiphophorus maculatus
ENSXMAG00000006633
I
0.705
EBF4
Myotis lucifugus
ENSMLUG00000023832
I
0.705
ENSMPUG00000009093
Mustela putorius furo
ENSMPUG00000009093
I
0.705
ENSAMEG00000011229
Ailuropoda melanoleuca
ENSAMEG00000011229
I
0.705
EBF4
Tursiops truncatus
ENSTTRG00000003459
I
0.705
EBF4
Canis familiaris
ENSCAFG00000006631
I
0.705
EBF4
Homo sapiens
ENSG00000088881
D
0.705
ebf3a
Gasterosteus aculeatus
ENSGACG00000009548
I
0.705
ENSPPYG00000010836
Pongo abelii
ENSPPYG00000010836
I
0.705
EBF4
Oryzias latipes
ENSORLG00000020414
I
0.705
EBF4
Gorilla gorilla
ENSGGOG00000015503
I
0.705
ENSPFOG00000002559
Poecilia formosa
ENSPFOG00000002559
I
0.705
ENSGMOG00000016636
Gadus morhua
ENSGMOG00000016636
I
0.705
EBF4
Bos taurus
ENSBTAG00000037757
I
0.705