fgenesh2_pm.scaffold_381000001 (Branchiostoma floridae)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) fgenesh2_pm.scaffold_381000001 T174841_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.838 0.838
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.832 0.832
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.832 0.832
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.832 0.832
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.808 0.808
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.802 0.802
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.754 0.754
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pm.scaffold_381000001 EBF1 17 183

Links

Other EBF1 family TFs
Other Branchiostoma floridae TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SINV26263 Solenopsis invicta SINV26263 I 0.938
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.865
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.844
Ogr13832 Ophisaurus gracilis Ogr13832 I 0.844
Ebf3 Mus musculus ENSMUSG00000010476 I 0.838
EBF3 Ornithorhynchus anatinus ENSOANG00000012326 I 0.838
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.838
EBF3 Homo sapiens ENSG00000108001 D 0.838
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.838
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.838
ENSLACG00000001966 Latimeria chalumnae ENSLACG00000001966 I 0.838
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.838
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.838
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.838
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.838
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.832
EBF3 Echinops telfairi ENSETEG00000014060 I 0.832
ENSTNIG00000017063 Tetraodon nigroviridis ENSTNIG00000017063 I 0.832
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.832
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.832
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.832
ENSMODG00000016695 Monodelphis domestica ENSMODG00000016695 I 0.832
EBF1 Oryzias latipes ENSORLG00000007471 I 0.832
EBF1 Canis familiaris ENSCAFG00000017318 I 0.832
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.832
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.832
ENSPMAG00000003301 Petromyzon marinus ENSPMAG00000003301 I 0.827
ACYPI060841 Acyrthosiphon pisum ACYPI060841 I 0.827
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I 0.826
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I 0.826
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.826
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.822
ENSSSCG00000025433 Sus scrofa ENSSSCG00000025433 I 0.822
ENSOARG00000012916 Ovis aries ENSOARG00000012916 I 0.822
EBF1 Equus caballus ENSECAG00000007964 I 0.822
EBF1 Takifugu rubripes ENSTRUG00000009320 I 0.820
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.820
ENSPFOG00000023105 Poecilia formosa ENSPFOG00000023105 I 0.817
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.814
ebf1a Danio rerio ENSDARG00000099849 I 0.814
ENSDNOG00000036735 Dasypus novemcinctus ENSDNOG00000036735 I 0.812
si:ch211-51e8.2 Danio rerio ENSDARG00000092635 I 0.808
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.808
ebf1b Danio rerio ENSDARG00000069196 I 0.808
Ebf4 Mus musculus ENSMUSG00000053552 D 0.808
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I 0.808
ENSMPUG00000013409 Mustela putorius furo ENSMPUG00000013409 I 0.808
EBF4 Canis familiaris ENSCAFG00000006631 I 0.802
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I 0.802
EBF4 Myotis lucifugus ENSMLUG00000023832 I 0.802
EBF1 Oryzias latipes ENSORLG00000002342 I 0.802
EBF4 Bos taurus ENSBTAG00000037757 I 0.802
EBF4 Homo sapiens ENSG00000088881 D 0.802
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.802
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.802
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I 0.802
LotgiG225788 Lottia gigantea LotgiG225788 I 0.802
EBF4 Gorilla gorilla ENSGGOG00000015503 I 0.802
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.802
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.802
ebf3a Oryzias latipes ENSORLG00000005870 I 0.802
ENSLACG00000017503 Latimeria chalumnae ENSLACG00000017503 I 0.799
EBF4 Oryzias latipes ENSORLG00000020414 I 0.796
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.796
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.796
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.796
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.796
SMAR000842 Strigamia maritima SMAR000842 I 0.790
CapteG93575 Capitella teleta CapteG93575 I 0.790
ENSMLUG00000025817 Myotis lucifugus ENSMLUG00000025817 I 0.790
EBF1 Taeniopygia guttata ENSTGUG00000000593 I 0.790
ENSPTRG00000039291 Pan troglodytes ENSPTRG00000039291 I 0.787
ENSACAG00000003052 Anolis carolinensis ENSACAG00000003052 I 0.778
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I 0.778
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I 0.766
ENSSTOG00000026314 Ictidomys tridecemlineatus ENSSTOG00000026314 I 0.760
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.760
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I 0.760
Sakowv30011013m.g Saccoglossus kowalevskii Sakowv30011013m.g I 0.760
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.760
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.760
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.760
EBF2 Sus scrofa ENSSSCG00000009655 I 0.760
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.760
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.760
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.760
EBF2 Bos taurus ENSBTAG00000040390 I 0.760
EBF2 Gallus gallus ENSGALG00000000242 I 0.760
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.760
EBF2 Canis familiaris ENSCAFG00000008918 I 0.760
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.760
EBF2 Homo sapiens ENSG00000221818 D 0.760
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.760
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.760
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.760
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.760
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.760
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.760
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I 0.760
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.760
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.760
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.760
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.760
AMEM016790 Anopheles merus AMEM016790 I 0.758
ACOM041538 Anopheles coluzzii ACOM041538 I 0.758
PHUM119360 Pediculus humanus PHUM119360 I 0.754
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.754
Ebf2 Mus musculus ENSMUSG00000022053 D 0.754
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.754
ENSSHAG00000011963 Sarcophilus harrisii ENSSHAG00000011963 I 0.754
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.754
Hsal_03265--XP_394171.3_APIME Harpegnathos saltator Hsal_03265--XP_394171.3_APIME I 0.753
LCUP013861 Lucilia cuprina LCUP013861 I 0.753
AARA002866 Anopheles arabiensis AARA002866 I 0.753
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.749
HelroG112029 Helobdella robusta HelroG112029 I 0.749
EBF1 Microcebus murinus ENSMICG00000010036 I 0.749
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.749
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.749
Myotis_brandtii_Ebf2_10005809 Myotis brandtii Myotis_brandtii_Ebf2_10005809 I 0.743
ISCW021819 Ixodes scapularis ISCW021819 I 0.743
ENSACAG00000005898 Anolis carolinensis ENSACAG00000005898 I 0.738
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.737
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.737
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.737
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.737
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.737
ACYPI50903 Acyrthosiphon pisum ACYPI50903 I 0.737
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.737
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.737
ENSPFOG00000009617 Poecilia formosa ENSPFOG00000009617 I 0.737
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.737
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.737
Myotis_brandtii_Ebf3_10024822 Myotis brandtii Myotis_brandtii_Ebf3_10024822 I 0.734
EBF4 Echinops telfairi ENSETEG00000015956 I 0.731
Pvit_04283 Pogona vitticeps Pvit_04283 I 0.731
EBF4 Ochotona princeps ENSOPRG00000013703 I 0.731
Ogr09591 Ophisaurus gracilis Ogr09591 I 0.731
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.731
L798_15574 Zootermopsis nevadensis L798_15574 I 0.731
Alligator_sinensis_CCG017610.1 Alligator sinensis Alligator_sinensis_CCG017610.1 I 0.730
KGM_09934 Danaus plexippus KGM_09934 I 0.725
MDOA011385 Musca domestica MDOA011385 I 0.725
PTRK_0001642500 Parastrongyloides trichosuri PTRK_0001642500 I 0.725
EFV50386 Trichinella spiralis EFV50386 I 0.719
D917_06660 Trichinella nativa D917_06660 I 0.719
D918_06798 Trichuris suis D918_06798 I 0.713
SVE_0119400 Strongyloides venezuelensis SVE_0119400 I 0.713
ebf2 Danio rerio ENSDARG00000042525 I 0.713
ebf2.S Xenopus laevis XB-GENE-971141 I 0.713
SSTP_0000472000 Strongyloides stercoralis SSTP_0000472000 I 0.713
ENSOANG00000005673 Ornithorhynchus anatinus ENSOANG00000005673 I 0.713
GH25280 Drosophila grimshawi FBgn0132735 I 0.711
AMEC010301 Anopheles melas AMEC010301 I 0.707
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.707
SMU15024001 Schmidtea mediterranea SMU15024001 I 0.707
GB42304 Apis mellifera GB42304 I 0.707
ENSNLEG00000004218 Nomascus leucogenys ENSNLEG00000004218 I 0.701
TTRE_0000372001 Trichuris trichiura TTRE_0000372001 I 0.701
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.701
EBF1 Tursiops truncatus ENSTTRG00000009929 I 0.701
ENSAMXG00000002783 Astyanax mexicanus ENSAMXG00000002783 I 0.701