SMU15024001 (Schmidtea mediterranea)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) SMU15024001 T174854_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Ebf4
M10468_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_01
0.752 0.752
EBF4
M10460_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_02
0.748 0.748
Ebf1
M09045_2.00
Mus musculus
DBYCCCWRGGGAV

BTCCCYWGGGRVH
Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A
0.735 0.735
Ebf1
M09527_2.00
Mus musculus
DBTCCCHDGGGA

TCCCHDGGGAVH
Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978
0.735 0.735
Ebf1
M10469_2.00
Mus musculus
VYMHVYYCYYBRGGGAVTHKHB

VDMDABTCCCYVRRGRRBDKRB
Transfac
Matys et al.(2006)
V$OLF1_01
0.735 0.735
EBF3
M10461_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF_Q6
0.722 0.722
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15024001 EBF1 21 250

Links

Other EBF1 family TFs
Other Schmidtea mediterranea TFs

273 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL003436 Aedes aegypti AAEL003436 I 0.726
AALB010330 Anopheles albimanus AALB010330 I 0.757
Aan_R007097 Calypte anna Aan_R007097 I 0.735
Aan_R009520 Calypte anna Aan_R009520 I 0.754
Aan_R013029 Calypte anna Aan_R013029 I 0.857
AARA002865 Anopheles arabiensis AARA002865 I 0.707
AATE014419 Anopheles atroparvus AATE014419 I 0.753
ACAC_0000654401 Angiostrongylus cantonensis ACAC_0000654401 I 0.727
ACEP22947 Atta cephalotes ACEP22947 I 0.775
ACHR004409 Anopheles christyi ACHR004409 I 0.765
ACOM041529 Anopheles coluzzii ACOM041529 I 0.806
ACUA010350 Anopheles culicifacies ACUA010350 I 0.791
ACYPI007722 Acyrthosiphon pisum ACYPI007722 I 0.825
ACYPI060841 Acyrthosiphon pisum ACYPI060841 I 0.748
ADAC003479 Anopheles darlingi ADAC003479 I 0.703
AEPI003553 Anopheles epiroticus AEPI003553 I 0.746
Afo_R012023 Aptenodytes forsteri Afo_R012023 I 0.806
AFUN004906 Anopheles funestus AFUN004906 I 0.791
AGAP011437 Anopheles gambiae AGAP011437 I 0.781
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 0.825
Alligator_sinensis_CCG006299.1 Alligator sinensis Alligator_sinensis_CCG006299.1 I 0.710
Alligator_sinensis_CCG017609.1 Alligator sinensis Alligator_sinensis_CCG017609.1 I 0.800
AMEC016105 Anopheles melas AMEC016105 I 0.743
AMEM017983 Anopheles merus AMEM017983 I 0.743
AQUA007473 Anopheles quadriannulatus AQUA007473 I 0.707
ASIS004664 Anopheles sinensis ASIS004664 I 0.812
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.865
ASTEI06456 Anopheles stephensi ASTEI06456 I 0.837
ASU_01180 Ascaris suum ASU_01180 I 0.721
BGIBMGA011565 Bombyx mori BGIBMGA011565 I 0.893
BGLB009291 Biomphalaria glabrata BGLB009291 I 0.753
Brh_R001594 Buceros rhinoceros Brh_R001594 I 0.806
Brh_R003197 Buceros rhinoceros Brh_R003197 I 0.786
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.913
CapteG93575 Capitella teleta CapteG93575 I 0.740
Cflo_00077--XP_394171.3_APIME Camponotus floridanus Cflo_00077--XP_394171.3_APIME I 0.775
CGI_10023990 Crassostrea gigas CGI_10023990 I 0.735
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.719
csin100403 Clonorchis sinensis csin100403 N 0.800
DAPPUDRAFT_22285 Daphnia pulex DAPPUDRAFT_22285 I 0.778
DICVIV_13258 Dictyocaulus viviparus DICVIV_13258 I 0.741
DILT_0000082701 Diphyllobothrium latum DILT_0000082701 I 0.831
DME_0000265301 Dracunculus medinensis DME_0000265301 I 0.739
ECANG7_02766 Echinococcus canadensis ECANG7_02766 I 0.769
EmuJ_001076400 Echinococcus multilocularis EmuJ_001076400 I 0.750
EmuJ_001076500 Echinococcus multilocularis EmuJ_001076500 N 0.712
ENSACAG00000003052 Anolis carolinensis ENSACAG00000003052 I 0.700
ENSACAG00000003097 Anolis carolinensis ENSACAG00000003097 I 0.806
ENSACAG00000007938 Anolis carolinensis ENSACAG00000007938 I 0.856
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.714
ENSACAG00000010823 Anolis carolinensis ENSACAG00000010823 I 0.818
ENSAMEG00000003291 Ailuropoda melanoleuca ENSAMEG00000003291 I 0.808
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.797
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.745
ENSAMXG00000001200 Astyanax mexicanus ENSAMXG00000001200 I 0.855
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.719
ENSAMXG00000006585 Astyanax mexicanus ENSAMXG00000006585 I 0.710
ENSAPLG00000015476 Anas platyrhynchos ENSAPLG00000015476 I 0.909
EBF3 Bos taurus ENSBTAG00000008272 I 0.857
EBF1 Bos taurus ENSBTAG00000037508 I 0.732
EBF4 Bos taurus ENSBTAG00000037757 I 0.745
ENSBTAP00000042518-D1 Bos grunniens ENSBTAP00000042518-D1 I 0.774
ENSBTAP00000053340-D1 Bos grunniens ENSBTAP00000053340-D1 I 0.740
EBF4 Canis familiaris ENSCAFG00000006631 I 0.745
EBF3 Canis familiaris ENSCAFG00000013267 I 0.898
EBF1 Canis familiaris ENSCAFG00000017318 I 0.723
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.716
EBF3 Callithrix jacchus ENSCJAG00000014357 I 0.847
EBF1 Callithrix jacchus ENSCJAG00000019016 I 0.732
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.856
EBF4 Cavia porcellus ENSCPOG00000004862 I 0.794
EBF3 Cavia porcellus ENSCPOG00000005096 I 0.722
EBF1 Cavia porcellus ENSCPOG00000026184 I 0.723
ENSCSAG00000004432 Chlorocebus sabaeus ENSCSAG00000004432 I 0.904
ENSCSAG00000010520 Chlorocebus sabaeus ENSCSAG00000010520 I 0.733
ENSCSAG00000010974 Chlorocebus sabaeus ENSCSAG00000010974 I 0.822
ENSCSAG00000016068 Chlorocebus sabaeus ENSCSAG00000016068 I 0.867
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.771
ebf1b Danio rerio ENSDARG00000069196 I 0.710
ebf1a Danio rerio ENSDARG00000099849 I 0.723
ebf3a Danio rerio ENSDARG00000100244 I 0.714
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 0.825
EBF1 Equus caballus ENSECAG00000007964 I 0.825
EBF4 Equus caballus ENSECAG00000010003 I 0.745
EBF1 Echinops telfairi ENSETEG00000011711 I 0.732
EBF4 Echinops telfairi ENSETEG00000015956 I 0.790
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.719
ENSFALG00000008502 Ficedula albicollis ENSFALG00000008502 I 0.732
EBF1 Felis catus ENSFCAG00000008547 I 0.780
ENSFCAG00000027202 Felis catus ENSFCAG00000027202 I 0.857
EBF4 Homo sapiens ENSG00000088881 D 0.890
EBF3 Homo sapiens ENSG00000108001 D 0.719
EBF1 Homo sapiens ENSG00000164330 D 0.857
EBF2 Homo sapiens ENSG00000221818 D 0.867
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.714
ENSGACG00000010053 Gasterosteus aculeatus ENSGACG00000010053 I 0.725
EBF1 Gasterosteus aculeatus ENSGACG00000018450 I 0.727
EBF1 Gallus gallus ENSGALG00000003699 I 0.732
EBF3 Gallus gallus ENSGALG00000010461 I 0.879
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.733
EBF4 Gorilla gorilla ENSGGOG00000015503 I 0.745
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I 0.926
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I 0.727
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I 0.710
ENSLACG00000005494 Latimeria chalumnae ENSLACG00000005494 I 0.857
EBF4 Loxodonta africana ENSLAFG00000006892 I 0.702
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.735
ENSLOCG00000001693 Lepisosteus oculatus ENSLOCG00000001693 I 0.727
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.714
ENSLOCG00000009282 Lepisosteus oculatus ENSLOCG00000009282 I 0.727
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.796
EBF1 Meleagris gallopavo ENSMGAG00000004896 I 0.909
ENSMGAG00000016563 Meleagris gallopavo ENSMGAG00000016563 I 0.857
EBF3 Microcebus murinus ENSMICG00000008536 I 0.847
EBF1 Microcebus murinus ENSMICG00000010036 I 0.797
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I 0.797
EBF3 Myotis lucifugus ENSMLUG00000005478 I 0.857
EBF4 Myotis lucifugus ENSMLUG00000023832 I 0.745
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.719
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.938
EBF1 Macaca mulatta ENSMMUG00000021696 I 0.733
ENSMMUP00000028570 Macaca fascicularis ENSMMUP00000028570 I 0.733
EBF4 Monodelphis domestica ENSMODG00000005256 I 0.740
EBF1 Monodelphis domestica ENSMODG00000008198 I 0.732
ENSMPUG00000002449 Mustela putorius furo ENSMPUG00000002449 I 0.898
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I 0.745
Ebf3 Mus musculus ENSMUSG00000010476 I 0.719
Ebf4 Mus musculus ENSMUSG00000053552 D 0.752
Ebf1 Mus musculus ENSMUSG00000057098 D 0.732
ENSNLEG00000009110 Nomascus leucogenys ENSNLEG00000009110 I 0.822
ENSOANG00000004212 Ornithorhynchus anatinus ENSOANG00000004212 I 0.800
EBF1 Ornithorhynchus anatinus ENSOANG00000012338 I 0.732
ENSOARG00000005967 Ovis aries ENSOARG00000005967 I 0.771
ENSOARG00000012836 Ovis aries ENSOARG00000012836 I 0.783
EBF3 Oryctolagus cuniculus ENSOCUG00000008915 I 0.904
EBF1 Oryctolagus cuniculus ENSOCUG00000008985 I 0.727
EBF4 Otolemur garnettii ENSOGAG00000004688 I 0.745
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.719
EBF1 Otolemur garnettii ENSOGAG00000013992 I 0.852
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.710
ENSONIG00000004376 Oreochromis niloticus ENSONIG00000004376 I 0.732
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.722
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I 0.723
ENSONIG00000019141 Oreochromis niloticus ENSONIG00000019141 I 0.714
EBF4 Ochotona princeps ENSOPRG00000013703 I 0.792
EBF1 Oryzias latipes ENSORLG00000002342 I 0.726
ebf3a Oryzias latipes ENSORLG00000005870 I 0.710
EBF1 Oryzias latipes ENSORLG00000007471 I 0.723
EBF4 Oryzias latipes ENSORLG00000020414 I 0.714
ENSP00000347463 Macaca fascicularis ENSP00000347463 I 0.841
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.759
ENSPANG00000007524 Papio anubis ENSPANG00000007524 I 0.714
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 0.825
EBF4 Procavia capensis ENSPCAG00000011947 I 0.735
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.723
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.713
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I 0.886
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.710
ENSPMAG00000003287 Petromyzon marinus ENSPMAG00000003287 I 0.857
ENSPMAG00000004238 Petromyzon marinus ENSPMAG00000004238 I 0.718
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.728
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I 0.745
ENSPPYG00000015995 Pongo abelii ENSPPYG00000015995 I 0.732
ENSPSIG00000005604 Pelodiscus sinensis ENSPSIG00000005604 I 0.844
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.719
EBF1 Pan troglodytes ENSPTRG00000017477 I 0.732
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.797
Ebf4 Rattus norvegicus ENSRNOG00000007408 I 0.780
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.719
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.812
ENSSHAG00000000353 Sarcophilus harrisii ENSSHAG00000000353 I 0.898
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.745
ENSSHAG00000018391 Sarcophilus harrisii ENSSHAG00000018391 I 0.700
EBF4 Sus scrofa ENSSSCG00000007171 I 0.793
ENSSSCG00000010757 Sus scrofa ENSSSCG00000010757 I 0.719
EBF1 Sus scrofa ENSSSCG00000017046 I 0.797
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I 0.777
ENSSTOG00000011505 Ictidomys tridecemlineatus ENSSTOG00000011505 I 0.797
ENSSTOG00000016352 Ictidomys tridecemlineatus ENSSTOG00000016352 I 0.886
EBF3 Tupaia belangeri ENSTBEG00000005858 I 0.805
EBF1 Tupaia belangeri ENSTBEG00000007800 I 0.867
EBF1 Taeniopygia guttata ENSTGUG00000000593 I 0.719
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.719
ebf3a Takifugu rubripes ENSTRUG00000005721 I 0.706
EBF1 Takifugu rubripes ENSTRUG00000009320 I 0.719
EBF1 Takifugu rubripes ENSTRUG00000013805 I 0.714
ENSTSYG00000019489 Tarsius syrichta ENSTSYG00000019489 I 0.803
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.745
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.714
ENSXMAG00000000489 Xiphophorus maculatus ENSXMAG00000000489 I 0.726
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.713
ENSXMAG00000010351 Xiphophorus maculatus ENSXMAG00000010351 I 0.841
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I 0.721
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.710
estExt_gwp.C_3380002 Branchiostoma floridae estExt_gwp.C_3380002 I 0.938
kn Drosophila melanogaster FBgn0001319 D 0.743
GF11778 Drosophila ananassae FBgn0088818 I 0.738
GG22397 Drosophila erecta FBgn0114569 I 0.743
GH12956 Drosophila grimshawi FBgn0120434 I 0.825
GH20479 Drosophila grimshawi FBgn0127942 I 0.738
GI21022 Drosophila mojavensis FBgn0143754 I 0.731
GL10656 Drosophila persimilis FBgn0148266 I 0.750
GM20182 Drosophila sechellia FBgn0175065 I 0.743
GJ21945 Drosophila virilis FBgn0209060 I 0.745
GK23295 Drosophila willistoni FBgn0225257 I 0.750
GE12286 Drosophila yakuba FBgn0230042 I 0.743
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.750
fgenesh2_pm.scaffold_381000001 Branchiostoma floridae fgenesh2_pm.scaffold_381000001 I 0.707
GB42304 Apis mellifera GB42304 I 0.732
Gfo_R004859 Geospiza fortis Gfo_R004859 I 0.754
Gfo_R013267 Geospiza fortis Gfo_R013267 I 0.806
GPUH_0000007401 Gongylonema pulchrum GPUH_0000007401 I 0.859
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I 0.812
HDID_0000285701 Hymenolepis diminuta HDID_0000285701 I 0.754
HelroG112029 Helobdella robusta HelroG112029 I 0.726
HelroG143625 Helobdella robusta HelroG143625 I 0.797
HMEL014948 Heliconius melpomene HMEL014948 I 0.893
HmN_000631100 Hymenolepis microstoma HmN_000631100 I 0.758
HNAJ_0001308901 Hymenolepis nana HNAJ_0001308901 I 0.853
Hsal_03263--XP_394171.3_APIME Harpegnathos saltator Hsal_03263--XP_394171.3_APIME I 0.775
ISCW021819 Ixodes scapularis ISCW021819 I 0.707
KGM_09934 Danaus plexippus KGM_09934 I 0.733
L596_g20342 Steinernema carpocapsae L596_g20342 I 0.705
L798_15574 Zootermopsis nevadensis L798_15574 I 0.802
L889_g1820 Steinernema feltiae L889_g1820 I 0.705
L893_g31120 Steinernema glaseri L893_g31120 I 0.726
L898_g8304 Steinernema monticolum L898_g8304 I 0.705
LLOJ000215 Lutzomyia longipalpis LLOJ000215 I 0.888
LotgiG225788 Lottia gigantea LotgiG225788 I 0.757
maker-nMf.1.1.scaf01942-snap-gene-0.10 Meloidogyne floridensis maker-nMf.1.1.scaf01942-snap-gene-0.10 I 0.728
MCINX016126 Melitaea cinxia MCINX016126 I 0.825
MCOS_0000276101 Mesocestoides corti MCOS_0000276101 I 0.741
MDOA011385 Musca domestica MDOA011385 I 0.709
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 0.825
Myotis_brandtii_Ebf3_10024819 Myotis brandtii Myotis_brandtii_Ebf3_10024819 I 0.757
Myotis_brandtii_Ebf3_10024822 Myotis brandtii Myotis_brandtii_Ebf3_10024822 I 0.719
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I 0.760
nRc.2.0.1.g14013 Romanomermis culicivorax nRc.2.0.1.g14013 I 0.775
NV10306 Nasonia vitripennis NV10306 I 0.750
Ocbimv22038949m.g Octopus bimaculoides Ocbimv22038949m.g I 0.809
PHUM119360 Pediculus humanus PHUM119360 I 0.751
Ppa-unc-3 Pristionchus pacificus PPA20518 I 0.821
PTRK_0001642500 Parastrongyloides trichosuri PTRK_0001642500 I 0.701
Pvit_12046 Pogona vitticeps Pvit_12046 I 0.825
Pvit_12666 Pogona vitticeps Pvit_12666 I 0.938
Pvit_16838 Pogona vitticeps Pvit_16838 I 0.732
RPRC005513 Rhodnius prolixus RPRC005513 I 0.821
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.839
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I 0.703
SINV26263 Solenopsis invicta SINV26263 I 0.958
Sjc_0015600 Schistosoma japonicum Sjc_0015600 I 0.800
SMAR000842 Strigamia maritima SMAR000842 I 0.710
Smp_194670 Schistosoma mansoni Smp_194670 N 0.748
SMRZ_0001331301 Schistosoma margrebowiei SMRZ_0001331301 N 0.776
SMTD_0000506201 Schistosoma mattheei SMTD_0000506201 I 0.849
SNAPOd2T00017027001 Oikopleura dioica SNAPOd2T00017027001 I 0.722
SPER_0003920801 Spirometra erinaceieuropaei SPER_0003920801 N 0.729
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.721
SROB_0000545801 Schistosoma rodhaini SROB_0000545801 I 0.735
T265_13606 Opisthorchis viverrini T265_13606 N 0.800
Tal_R004164 Tyto alba Tal_R004164 I 0.806
TC001270 Tribolium castaneum TC001270 I 0.754
TCLT_0000613901 Thelazia callipaeda TCLT_0000613901 I 0.748
TRE_0001373801 Trichobilharzia regenti TRE_0001373801 I 0.717
TRE_0001760201 Trichobilharzia regenti TRE_0001760201 N 0.796
TsM_000377300 Taenia solium TsM_000377300 N 0.727
TsM_000377600 Taenia solium TsM_000377600 N 0.720
TTAC_0000009401 Hydatigera taeniaeformis TTAC_0000009401 I 0.819
WUBG_00630 Wuchereria bancrofti WUBG_00630 I 0.736
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.723
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.824
ebf3.L Xenopus laevis XB-GENE-962547 I 0.710
YQE_08127 Dendroctonus ponderosae YQE_08127 I 0.783