SMTD_0000506201 (Schistosoma mattheei)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) SMTD_0000506201 T174965_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Ebf4
M10468_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_01
0.748 0.748
EBF4
M10460_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_02
0.748 0.748
Ebf2
M10467_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COE2_01
0.741 0.741
EBF3
M10461_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF_Q6
0.741 0.741
kn
M03721_2.00
Drosophila melanogaster
BWATTCCCHDGGGAATWV

BWATTCCCHDGGGAATWV
SELEX
Nitta et al.(2015)
kn_1
0.727 0.727
Ebf1
M09045_2.00
Mus musculus
DBYCCCWRGGGAV

BTCCCYWGGGRVH
Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A
0.719 0.719
Ebf1
M09527_2.00
Mus musculus
DBTCCCHDGGGA

TCCCHDGGGAVH
Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978
0.719 0.719
Ebf1
M10469_2.00
Mus musculus
VYMHVYYCYYBRGGGAVTHKHB

VDMDABTCCCYVRRGRRBDKRB
Transfac
Matys et al.(2006)
V$OLF1_01
0.719 0.719
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMTD_0000506201-mRNA-1 EBF1 1 139

Links

Other EBF1 family TFs
Other Schistosoma mattheei TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Smp_194670 Schistosoma mansoni Smp_194670 N 0.964
TRE_0001760201 Trichobilharzia regenti TRE_0001760201 N 0.944
SMRZ_0001331301 Schistosoma margrebowiei SMRZ_0001331301 N 0.914
SINV26263 Solenopsis invicta SINV26263 I 0.896
SMU15024001 Schmidtea mediterranea SMU15024001 I 0.849
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.808
TRE_0001373801 Trichobilharzia regenti TRE_0001373801 I 0.800
RPRC005513 Rhodnius prolixus RPRC005513 I 0.768
SPER_0003920801 Spirometra erinaceieuropaei SPER_0003920801 N 0.763
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.748
Ebf4 Mus musculus ENSMUSG00000053552 D 0.748
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.748
MCINX016127 Melitaea cinxia MCINX016127 I 0.748
ENSLACG00000001966 Latimeria chalumnae ENSLACG00000001966 I 0.748
LotgiG225788 Lottia gigantea LotgiG225788 I 0.748
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.748
ENSSTOG00000026314 Ictidomys tridecemlineatus ENSSTOG00000026314 I 0.741
ebf2.S Xenopus laevis XB-GENE-971141 I 0.741
ACYPI060841 Acyrthosiphon pisum ACYPI060841 I 0.741
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.741
Myotis_brandtii_Ebf2_10005809 Myotis brandtii Myotis_brandtii_Ebf2_10005809 I 0.741
AMEC010301 Anopheles melas AMEC010301 I 0.734
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.734
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.734
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.734
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.734
EBF2 Gallus gallus ENSGALG00000000242 I 0.734
HelroG112029 Helobdella robusta HelroG112029 I 0.734
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.734
EBF3 Echinops telfairi ENSETEG00000014060 I 0.734
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.734
ENSMODG00000016695 Monodelphis domestica ENSMODG00000016695 I 0.734
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.734
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.734
ENSTNIG00000017063 Tetraodon nigroviridis ENSTNIG00000017063 I 0.734
ENSSHAG00000011963 Sarcophilus harrisii ENSSHAG00000011963 I 0.734
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.734
MDOA011385 Musca domestica MDOA011385 I 0.727
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.719
TsM_000377300 Taenia solium TsM_000377300 N 0.715
ENSOANG00000005673 Ornithorhynchus anatinus ENSOANG00000005673 I 0.712
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.712
ENSMLUG00000025817 Myotis lucifugus ENSMLUG00000025817 I 0.712