CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SROB_0000545801
(
Schistosoma rodhaini
)
EBF1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF16422 (COE1_DBD)
(none)
SROB_0000545801
T174969_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
kn
M03721_2.00
Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV
SELEX
Nitta et al.(2015)
kn_1
0.706
0.706
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0000545801-mRNA-1
EBF1
14
84
CLVLHGTRQHFLKFFMKCNQNCLKNAGNPRDMRRFQVAISSTHAIERKLLCISDNMFVHNNSKHGRRIRRT
Links
Other
EBF1
family TFs
Other
Schistosoma rodhaini
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy