TTAC_0000009401 (Hydatigera taeniaeformis)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) TTAC_0000009401 T174982_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
kn
M03721_2.00
Drosophila melanogaster
BWATTCCCHDGGGAATWV

BWATTCCCHDGGGAATWV
SELEX
Nitta et al.(2015)
kn_1
0.768 0.768
Ebf1
M09045_2.00
Mus musculus
DBYCCCWRGGGAV

BTCCCYWGGGRVH
Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A
0.761 0.761
Ebf1
M09527_2.00
Mus musculus
DBTCCCHDGGGA

TCCCHDGGGAVH
Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978
0.761 0.761
Ebf4
M10468_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_01
0.761 0.761
EBF4
M10460_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_02
0.761 0.761
Ebf1
M10469_2.00
Mus musculus
VYMHVYYCYYBRGGGAVTHKHB

VDMDABTCCCYVRRGRRBDKRB
Transfac
Matys et al.(2006)
V$OLF1_01
0.761 0.761
EBF3
M10461_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF_Q6
0.755 0.755
Ebf2
M10467_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COE2_01
0.742 0.742
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TTAC_0000009401-mRNA-1 EBF1 8 162

Links

Other EBF1 family TFs
Other Hydatigera taeniaeformis TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AALB010330 Anopheles albimanus AALB010330 I 0.714
ACAC_0000654401 Angiostrongylus cantonensis ACAC_0000654401 I 0.742
ACEP22947 Atta cephalotes ACEP22947 I 0.700
ACHR004409 Anopheles christyi ACHR004409 I 0.706
ACOM041529 Anopheles coluzzii ACOM041529 I 0.731
ACUA010350 Anopheles culicifacies ACUA010350 I 0.731
ACYPI007722 Acyrthosiphon pisum ACYPI007722 I 0.778
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.735
Afo_R012023 Aptenodytes forsteri Afo_R012023 I 0.716
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.846
ASTEI06456 Anopheles stephensi ASTEI06456 I 0.755
BGIBMGA011565 Bombyx mori BGIBMGA011565 I 0.714
Brh_R001594 Buceros rhinoceros Brh_R001594 I 0.716
Brh_R003197 Buceros rhinoceros Brh_R003197 I 0.700
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.826
Cflo_00077--XP_394171.3_APIME Camponotus floridanus Cflo_00077--XP_394171.3_APIME I 0.700
csin100403 Clonorchis sinensis csin100403 N 0.806
DILT_0000082701 Diphyllobothrium latum DILT_0000082701 I 0.877
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.761
EBF1 Meleagris gallopavo ENSMGAG00000004896 I 0.827
EBF1 Otolemur garnettii ENSOGAG00000013992 I 0.773
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.725
EBF1 Tupaia belangeri ENSTBEG00000007800 I 0.761
EBF1 Sus scrofa ENSSSCG00000017046 I 0.710
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.761
ebf1b Danio rerio ENSDARG00000069196 I 0.774
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.742
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.735
EBF2 Gallus gallus ENSGALG00000000242 I 0.735
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.742
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.759
EBF2 Homo sapiens ENSG00000221818 D 0.816
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.804
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.735
ebf2.S Xenopus laevis XB-GENE-971141 I 0.742
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.755
EBF3 Oryctolagus cuniculus ENSOCUG00000008915 I 0.816
EBF3 Callithrix jacchus ENSCJAG00000014357 I 0.780
EBF3 Gallus gallus ENSGALG00000010461 I 0.802
EBF3 Microcebus murinus ENSMICG00000008536 I 0.780
EBF3 Canis familiaris ENSCAFG00000013267 I 0.818
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.755
Ebf4 Mus musculus ENSMUSG00000053552 D 0.761
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.875
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.729
EBF4 Homo sapiens ENSG00000088881 D 0.814
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.768
EmuJ_001076400 Echinococcus multilocularis EmuJ_001076400 I 1.000
ENSACAG00000003097 Anolis carolinensis ENSACAG00000003097 I 0.716
ENSACAG00000007938 Anolis carolinensis ENSACAG00000007938 I 0.788
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.710
ENSAMXG00000001200 Astyanax mexicanus ENSAMXG00000001200 I 0.774
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.761
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.735
ENSAPLG00000015476 Anas platyrhynchos ENSAPLG00000015476 I 0.827
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.729
ENSCSAG00000004432 Chlorocebus sabaeus ENSCSAG00000004432 I 0.816
ENSCSAG00000016068 Chlorocebus sabaeus ENSCSAG00000016068 I 0.816
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.742
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.735
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I 0.926
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.729
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I 0.710
ENSMPUG00000002449 Mustela putorius furo ENSMPUG00000002449 I 0.818
ENSP00000347463 Macaca fascicularis ENSP00000347463 I 0.775
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.755
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.761
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.755
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I 0.842
ENSPMAG00000003287 Petromyzon marinus ENSPMAG00000003287 I 0.762
ENSPSIG00000005604 Pelodiscus sinensis ENSPSIG00000005604 I 0.750
ENSSHAG00000000353 Sarcophilus harrisii ENSSHAG00000000353 I 0.818
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.761
ENSSTOG00000011505 Ictidomys tridecemlineatus ENSSTOG00000011505 I 0.710
ENSSTOG00000016352 Ictidomys tridecemlineatus ENSSTOG00000016352 I 0.818
ENSTSYG00000019489 Tarsius syrichta ENSTSYG00000019489 I 0.732
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.755
ENSXMAG00000010351 Xiphophorus maculatus ENSXMAG00000010351 I 0.794
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.735
estExt_gwp.C_3380002 Branchiostoma floridae estExt_gwp.C_3380002 I 0.875
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.768
GF11778 Drosophila ananassae FBgn0088818 I 0.768
Gfo_R013267 Geospiza fortis Gfo_R013267 I 0.716
GJ21945 Drosophila virilis FBgn0209060 I 0.768
GK23295 Drosophila willistoni FBgn0225257 I 0.768
GL10656 Drosophila persimilis FBgn0148266 I 0.768
GPUH_0000007401 Gongylonema pulchrum GPUH_0000007401 I 0.859
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I 0.875
HelroG112029 Helobdella robusta HelroG112029 I 0.794
HMEL014948 Heliconius melpomene HMEL014948 I 0.714
HNAJ_0001308901 Hymenolepis nana HNAJ_0001308901 I 0.941
Hsal_03263--XP_394171.3_APIME Harpegnathos saltator Hsal_03263--XP_394171.3_APIME I 0.700
LLOJ000215 Lutzomyia longipalpis LLOJ000215 I 0.857
LotgiG225788 Lottia gigantea LotgiG225788 I 0.774
maker-nMf.1.1.scaf01942-snap-gene-0.10 Meloidogyne floridensis maker-nMf.1.1.scaf01942-snap-gene-0.10 I 0.719
MDOA011385 Musca domestica MDOA011385 I 0.781
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.748
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.735
nRc.2.0.1.g14013 Romanomermis culicivorax nRc.2.0.1.g14013 I 0.700
Ocbimv22038949m.g Octopus bimaculoides Ocbimv22038949m.g I 0.735
Ppa-unc-3 Pristionchus pacificus PPA20518 I 0.731
Pvit_12666 Pogona vitticeps Pvit_12666 I 0.875
RPRC005513 Rhodnius prolixus RPRC005513 I 0.804
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.774
SINV26263 Solenopsis invicta SINV26263 I 0.938
SMU15024001 Schmidtea mediterranea SMU15024001 I 0.819
SNAPOd2T00017027001 Oikopleura dioica SNAPOd2T00017027001 I 0.715
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.768
T265_13606 Opisthorchis viverrini T265_13606 N 0.806
Tal_R004164 Tyto alba Tal_R004164 I 0.716
TRE_0001373801 Trichobilharzia regenti TRE_0001373801 I 0.733
TsM_000377600 Taenia solium TsM_000377600 N 0.853