Bo5g106280 (Brassica oleracea)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 Bo5g106280 T175014_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.964 0.964
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.964 0.964
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.964 0.964
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.927 0.927
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.899 0.899
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.827 0.827
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g106280.1 EIN3 67 316

Links

Other EIN3 family TFs
Other Brassica oleracea TFs

145 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.976
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.976
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.976
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.964
EIN3 Arabidopsis thaliana AT3G20770 D 0.964
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.956
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.931
29708.m000185 Ricinus communis 29708.m000185 I 0.923
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.923
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.923
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.919
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.919
TCM_042022 Theobroma cacao TCM_042022 I 0.919
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.919
Bo1g108650 Brassica oleracea Bo1g108650 I 0.919
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.915
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.915
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.915
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.911
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.911
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.911
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.911
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.911
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.911
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.911
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.907
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.907
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.903
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.903
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.903
EIL1 Arabidopsis thaliana AT2G27050 D 0.903
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.903
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.903
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.899
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.899
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.899
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.899
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.899
Bra001802 Brassica rapa Bra001802 I 0.895
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.895
Ca_10236 Cicer arietinum Ca_10236 I 0.895
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.895
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.895
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.891
Ca_07534 Cicer arietinum Ca_07534 I 0.890
Bo3g076180 Brassica oleracea Bo3g076180 I 0.887
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.887
Bra000528 Brassica rapa Bra000528 I 0.883
mgf018950m Mimulus guttatus mgf018950m I 0.883
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.878
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.878
Bo3g041690 Brassica oleracea Bo3g041690 I 0.875
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.875
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.875
PK13351.1 Cannabis sativa PK13351.1 I 0.875
MDP0000202831 Malus domestica MDP0000202831 I 0.871
Pm017009 Prunus mume Pm017009 I 0.871
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.871
mgf015996m Mimulus guttatus mgf015996m I 0.871
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.870
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.867
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.867
PK01239.1 Cannabis sativa PK01239.1 I 0.867
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.867
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.863
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.863
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.863
MDP0000564884 Malus domestica MDP0000564884 I 0.859
MDP0000212881 Malus domestica MDP0000212881 I 0.859
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.859
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.855
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.855
MDP0000306498 Malus domestica MDP0000306498 I 0.855
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.847
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.847
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.847
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.843
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.831
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.827
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.827
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.819
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.815
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.815
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.806
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.806
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.802
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.802
mgf012394m Mimulus guttatus mgf012394m I 0.802
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.802
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.802
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.802
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.802
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.802
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.802
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.798
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.794
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.794
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.794
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.794
OS03G0324200 Oryza sativa OS03G0324200 I 0.793
OS03G0324300 Oryza sativa OS03G0324300 I 0.793
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.790
F775_28545 Aegilops tauschii F775_28545 I 0.789
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.789
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.789
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.788
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.788
Si034616m.g Setaria italica Si034616m.g I 0.786
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.782
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.782
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.782
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.781
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.770
OS07G0685700 Oryza sativa OS07G0685700 I 0.770
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.770
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.770
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.770
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.770
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.766
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.742
Si029213m.g Setaria italica Si029213m.g I 0.741
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.738
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.734
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.734
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.734
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.730
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.726
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.726
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.725
OBART07G26760 Oryza barthii OBART07G26760 I 0.722
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.714
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.714
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.710
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.710
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.709
SELMODRAFT_16065 Selaginella moellendorffii SELMODRAFT_16065 I 0.706
SELMODRAFT_16064 Selaginella moellendorffii SELMODRAFT_16064 I 0.706
PK19114.1 Cannabis sativa PK19114.1 I 0.706
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.704
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.702
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.702
Pm028171 Prunus mume Pm028171 I 0.702
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.702
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.702
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.702