Bra003831 (Brassica rapa)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 Bra003831 T175021_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.822 0.822
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.822 0.822
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra003831.1-P EIN3 37 278

Links

Other EIN3 family TFs
Other Brassica rapa TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo6g087550 Brassica oleracea Bo6g087550 I 0.868
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.826
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.826
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.826
EIL3 Arabidopsis thaliana AT1G73730 D 0.822
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.818
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.817
Bra015970 Brassica rapa Bra015970 I 0.806
Bra008110 Brassica rapa Bra008110 I 0.806
Bo6g118030 Brassica oleracea Bo6g118030 I 0.801
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.760
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.756
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.744
30169.m006395 Ricinus communis 30169.m006395 I 0.744
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.744
MDP0000562585 Malus domestica MDP0000562585 I 0.740
MDP0000490180 Malus domestica MDP0000490180 I 0.740
MDP0000565880 Malus domestica MDP0000565880 I 0.740
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.736
cassava30700.valid.m1 Manihot esculenta cassava30700.valid.m1 I 0.736
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.736
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.731
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.731
Pm028171 Prunus mume Pm028171 I 0.731
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.731
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.731
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.731
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.727
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.727
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.723
PK19114.1 Cannabis sativa PK19114.1 I 0.723
TCM_040510 Theobroma cacao TCM_040510 I 0.723
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.723
Ca_02669 Cicer arietinum Ca_02669 I 0.719
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.719
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.717
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.713
Gorai.010G128700 Gossypium raimondii Gorai.010G128700 I 0.711
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.711
Solyc01g006650.1 Solanum lycopersicum Solyc01g006650.1 I 0.711
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.709
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.700